HNG7HBGXG_n02_2254_d06_replicate2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HNG7HBGXG_n02_2254_d06_replicate2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1400656
Sequences flagged as poor quality	0
Sequence length	151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACATAGCACCGTGTTCAACCTTGAGAATTTCTGGTAACAACTCATGGGCT	2489	0.17770244799579626	No Hit
ACATTCTACTGAACAACCAATTGGGTTCGTGGGCAAACCAAAATAGGAAC	1930	0.13779257719240126	No Hit
GTGCTATGTGATCCATTCCCTCCTTCCTGAACTGGCAATCCAGATAAAGG	1893	0.1351509578368993	No Hit
ATCTAAAATATCTCCCCATCCCATTACTCCCTGTCAAAGCCCTTTGTATC	1864	0.13308049942312744	No Hit
GTAGCATGTTGTTTAGTCTCTGTGTTTATGAATTTCCAGTTTTCTTCTTG	1730	0.12351355364914726	No Hit
GTGTAGCATTTGACATATAGAAAAGCACTTAGGGAAAATCATTGTGTGAC	1651	0.11787333934956193	No Hit
GTATTGGGAGTCAGGATATGGTCATTGGAGAAGAATTTATTGTGTTTATT	1594	0.11380381763973452	No Hit
GTTATGTGTTGGCCTTTGGCTCAAGTCATGAATTTAGGGTCCTGGAATTG	1550	0.11066243246021863	No Hit
GTATTATTTTTTCATTTACCTCAAAGTATTTCTGTGTTCCTATTTTGGTT	1494	0.10666430586810752	No Hit
GTGTGGGGTTGAAACTCAAAACCACAAGATCAGGAGTCACAGAGCTCCAC	1473	0.10516500839606584	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGACGCG	45	1.1947787E-4	64.436226	145
GTCGTCG	55	3.221476E-4	52.72055	145
TTACGTG	190	0.0	49.66986	2
GTTACGT	205	0.0	49.605045	1
ACGTGTT	220	0.0	42.84309	4
TATGGAC	450	0.0	41.886536	5
ACTACGC	90	7.401786E-5	40.35331	1
AGCGAAA	270	0.0	40.35331	1
CTTATAT	540	0.0	39.0082	1
CAGTGCA	710	0.0	38.85335	2
GATAGCG	470	0.0	38.558914	145
CGAAAGC	305	0.0	38.052387	3
CCGAGGT	485	0.0	37.37304	4
TAATACG	80	0.002036384	36.251846	4
GTTGACA	1245	0.0	35.5887	1
GCGAAAG	335	0.0	34.67196	2
TTAGGTA	400	0.0	34.439255	4
ACATGGT	1245	0.0	34.3555	5
AGTGCAG	810	0.0	34.029877	3
CATTCTA	1800	0.0	33.47409	2