HNG7HBGXG_n02_2254_d04_replicate2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HNG7HBGXG_n02_2254_d04_replicate2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	603266
Sequences flagged as poor quality	0
Sequence length	151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACATAGCACCGTGTTCAACCTTGAGAATTTCTGGTAACAACTCATGGGCT	1105	0.18316961340436888	No Hit
GTGCTATGTGATCCATTCCCTCCTTCCTGAACTGGCAATCCAGATAAAGG	765	0.12680973235687076	No Hit
ACATTCTACTGAACAACCAATTGGGTTCGTGGGCAAACCAAAATAGGAAC	737	0.12216833038825327	No Hit
GTGTAGCATTTGACATATAGAAAAGCACTTAGGGAAAATCATTGTGTGAC	693	0.11487469872328293	No Hit
ATCTAAAATATCTCCCCATCCCATTACTCCCTGTCAAAGCCCTTTGTATC	680	0.11271976209499623	No Hit
GTATTGGGAGTCAGGATATGGTCATTGGAGAAGAATTTATTGTGTTTATT	680	0.11271976209499623	No Hit
GTATTATTTTTTCATTTACCTCAAAGTATTTCTGTGTTCCTATTTTGGTT	666	0.1103990611106875	No Hit
GTTATGTGTTGGCCTTTGGCTCAAGTCATGAATTTAGGGTCCTGGAATTG	646	0.10708377399024642	No Hit
GTGTGGGGTTGAAACTCAAAACCACAAGATCAGGAGTCACAGAGCTCCAC	641	0.10625495221013616	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCACCG	10	0.0070892484	145.0063	5
GTTACGT	95	0.0	76.43951	1
AGCGAAA	130	0.0	61.445595	1
ACGTGTT	125	1.8189894E-12	58.007328	4
ACCGTAA	45	0.00957582	48.411682	1
AACGGGT	155	7.366907E-10	42.112568	3
GTAACGG	195	3.6379788E-12	40.963734	1
AGTCCGC	90	7.484302E-5	40.27285	145
ACATGGT	505	0.0	40.199768	5
GCGAAAG	200	5.456968E-12	39.9032	2
CCGACGC	165	1.366061E-9	39.54062	145
AAGGTCG	75	0.0014838107	38.661938	9
CGAAAGC	210	9.094947E-12	37.990437	3
GTTGACA	520	0.0	37.705254	1
ACGGGTT	175	2.4228939E-9	37.290424	4
CACGACT	100	1.3897613E-4	36.25458	4
CGGGTTG	180	3.1941454E-9	36.25157	5
GCTACTA	80	0.0020371985	36.245567	9
TAACGGG	185	4.147296E-9	35.29521	2
CAGTGCA	315	0.0	34.54822	2