HNG7HBGXG_n02_2251_d02_replicate1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HNG7HBGXG_n02_2251_d02_replicate1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1427423
Sequences flagged as poor quality	0
Sequence length	151
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTTCTATACCACTGTGGTTGGAAAAGATGGTTGATTTGATTTCAGTCCTC	2053	0.14382562141705715	No Hit
GTATTATTTTTTCATTTACCTCAAAGTATTTCTGTGTTCCTATTTTGGTT	1973	0.13822111595511632	No Hit
GTTCTGATGTGTTCCTTCTACTAACTTTGGACTTTATTTGTTCTTTTCTG	1561	0.10935791282612092	No Hit
GTCTTTTTCTTTAGGATTCAATCTTAGTAGGTTGTATGTTTCTGGAAATG	1551	0.10865734964337831	No Hit
AGTAGAAACAAGGCATTTTTTCATGAAGGACAAGCCAAATTCACTTCCCT	1536	0.1076065048692644	No Hit
GTAGCATGTTGTTTAGTCTCTGTGTTTATGAATTTCCAGTTTTCTTCTTG	1526	0.10690594168652179	No Hit
GTTTTCTTCTTGTAATTGATTTCTAGTTCTATACCACTGTGGTTGGAAAA	1482	0.10382346368245432	No Hit
ATTTCATTTATTTAAGTTCTGATGTGTTCCTTCTACTAACTTTGGACTTT	1465	0.10263250627179189	No Hit
CCCTTATACTGGAGATCCCCCATATAGCCATGGAACAGGAACAGGATACA	1446	0.10130143622458093	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGTCG	40	0.006054548	54.36788	145
GGTCGTT	225	0.0	45.105206	7
AAGGTCG	230	0.0	44.126198	5
CGAATAT	150	5.3842086E-10	43.494305	145
CTGCCGC	430	0.0	40.459816	145
GTCGTTT	260	0.0	39.03335	8
GTAGAAA	1020	0.0	37.704937	2
GTTGACA	1140	0.0	36.31777	1
GTATTAT	1540	0.0	35.846107	1
AGGTCGT	290	0.0	34.996643	6
ACATGGT	1260	0.0	33.945156	5
GCCGACC	130	1.6567586E-5	33.457157	145
AGCGAAA	400	0.0	32.68599	1
TTACGTG	180	1.2830424E-7	32.250767	2
TATACTG	1290	0.0	30.345928	5
GCGAAAG	435	0.0	30.026573	2
TATATAG	460	0.0	29.953274	3
TACTGCG	170	3.0151568E-6	29.850079	5
GTTACGT	200	3.2031858E-7	29.054214	1
CGAAAGC	450	0.0	29.00738	3