HNG7HBGXG_n02_2248_d08.2_replicate2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HNG7HBGXG_n02_2248_d08.2_replicate2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2360107
Sequences flagged as poor quality	0
Sequence length	151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGCAGGTACTGATCCAAAATGGAAGACTTTGTGCGACAGTGCTTCAATCC	6386	0.27058095247376496	No Hit
GTATGGATAGCAAATAGTAGCATTGCCACAACTATTTTAGTGCATGTGTG	5706	0.24176869946998164	No Hit
CCCTTATACTGGAGATCCCCCATATAGCCATGGAACAGGAACAGGATACA	5484	0.2323623462834524	No Hit
AGTAGAAACAAGGCATTTTTTCATGAAGGACAAGCCAAATTCACTTCCCT	4924	0.20863460851563084	No Hit
TTTTTGGACAGTATGGATAGCAAATAGTAGCATTGCCACAACTATTTTAG	4495	0.19045746654706758	No Hit
CTTCAATGGTGGAACAGATCTTCAAGATCTCAGCAAATTCTTCTTTCTTA	3514	0.14889155449308017	No Hit
GTATTATTTTTTCATTTACCTCAAAGTATTTCTGTGTTCCTATTTTGGTT	2592	0.109825529096774	No Hit
TTCTTAATCCTTCCAGACTCGAAGTCAATCCGTGCATCAATTCGGGCCCT	2590	0.10974078717617465	No Hit
ATTTTAGTGCATGTGTGAGGAAGGAGTTGAACCAAGATGCATTAAGCAAA	2425	0.10274957872672723	No Hit
GTGTGGGGTTGAAACTCAAAACCACAAGATCAGGAGTCACAGAGCTCCAC	2388	0.10118185319563901	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTACTG	1460	0.0	65.54331	5
GTACTGA	1630	0.0	59.593224	6
GTAGAAA	2190	0.0	53.67866	2
GCAGGTA	1750	0.0	53.49121	2
AGCGAAA	575	0.0	50.521133	1
ACTGATC	2090	0.0	48.55601	8
GTTACGT	215	0.0	47.29013	1
ACCGTAC	100	2.7037222E-6	43.57448	1
ACAAGGC	2180	0.0	43.55882	8
AGGTACT	2345	0.0	42.356674	4
GCGAAAG	695	0.0	41.764374	2
CGAAGCG	70	0.0010578528	41.421253	9
CAGGTAC	2315	0.0	40.72367	3
GTATGGA	2365	0.0	40.227318	1
AGCAGGT	2360	0.0	39.69709	1
CGAAAGC	745	0.0	38.936623	3
TGGATAG	2380	0.0	38.38289	4
GACAGTA	1480	0.0	36.733376	7
ATAGTCG	80	0.0020389424	36.2436	8
TTATTCG	100	1.39347E-4	36.2436	145