HNG7HBGXG_n02_2238_d12_replicate1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HNG7HBGXG_n02_2238_d12_replicate1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1424098
Sequences flagged as poor quality	0
Sequence length	151
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTTATATAGATTGTTCACGTTCGCATCATGCTCATCGAGTGTTTTTTGAT	3400	0.23874761427935437	No Hit
CACCTATACCGAGCAAACAAATTTGTACATAAGAAACGACACAACAACAA	2307	0.1619972782771972	No Hit
GTCCTACATCGTCGAAAGATCATCAGCTGTAAATGGAACGTGTTACCCTG	2203	0.15469441007571108	No Hit
GTATAGGTGGGTGGGTGATGTATGCCCCACACGAAAAGAATGCTCTTTCC	2101	0.14753198164733045	No Hit
GAATAATATAGTCGACAAGATGAACAAGCAATATGAAATAATTGATCATG	1970	0.13833317650892005	No Hit
GTACTAAAACCAGGCCAAACATTGCGAGTACGATCCAATGGGAATCTAAT	1939	0.13615636002578474	No Hit
TCCATGCACTGATCATCACATTTATGGTATAGCTCGAAACAGCCTTTCCC	1605	0.1127029179171658	No Hit
GTTTTAGTACCGACCAATAATAATCAATTCTTCCCTGCAGACCATTGACA	1584	0.11122830029955803	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGACGC	80	5.88052E-7	54.368256	145
ACGACGC	45	0.009644693	48.32734	145
ACATGGT	670	0.0	40.03516	5
GACGACC	100	1.392761E-4	36.245506	145
GGATAGC	430	0.0	35.40507	5
CTGCCGC	395	0.0	34.86909	145
CGCTATA	260	3.6379788E-12	33.499737	2
TGCGTTA	90	0.003630948	32.218227	8
TTACGTG	115	3.1416764E-4	31.557722	2
ATCTATG	460	0.0	30.000929	1
GTTGACA	945	0.0	29.975864	1
GCGAAAG	270	1.6916601E-10	29.59156	1
GGTACTG	320	1.8189894E-12	29.45154	5
CGTGATC	125	5.1586656E-4	28.996407	8
GCGTTAA	100	0.0060789916	28.996405	9
TTTAAAC	985	0.0	27.982779	3
GTACTGC	235	4.2995453E-8	27.766415	4
TAACGTA	105	0.0077115535	27.617563	5
GACAGTA	530	0.0	27.355099	7
GTATAGG	1195	0.0	27.35165	1