HNG7HBGXG_n02_1794_d04_replicate2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HNG7HBGXG_n02_1794_d04_replicate2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2102489
Sequences flagged as poor quality	0
Sequence length	151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTATTAGTAGAGGTCTTATTTTCTCAATTTTCTTTCTCGTCGATTCGTTG	11804	0.5614298100965094	No Hit
GTATGGATAGCAAATAGTAGCATTGCCACAACTATTTTAGTGCATGTGTG	3060	0.14554178404738383	No Hit
AGCAGGTACTGATCCAAAATGGAAGACTTTGTGCGACAGTGCTTTAATCC	3041	0.14463809323140334	No Hit
CTACTAATAGAGGGCACAGCCTCATTGAGTCCAGGGATGATGATGGGCAT	3026	0.143924653113524	No Hit
GTTTAGAAATGTCTTGAGCATTGCCCCTATAATGTTCTCAAATAAAATGG	2556	0.12157019608663826	No Hit
ATATAGCGGTATCCCCTCCCCCTCATGGCTCGGGTCCTCAATGCTTAATT	2555	0.12152263341211296	No Hit
GTCTAACAGCCAATGAGTCAGGAAGGTTAATAGATTTCCTCAAGGACGTA	2369	0.11267597595040926	No Hit
CTTATTAGGTAGCTCTTTTTTGTCAGCTTTTGCTTCTTCTTCCCTATTGT	2329	0.1107734689693977	No Hit
TTTTTGGACAGTATGGATAGCAAATAGTAGCATTGCCACAACTATTTTAG	2150	0.10225975022937099	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTACTG	735	60.16967	5
GCAGGTA	825	54.550663	2
CGAAAGC	505	47.393963	3
CTATTAG	3795	46.891693	1
TATAGCG	745	45.793503	2
TATTAGT	4090	44.723885	2
GTACTGA	1030	44.339096	6
TAGTAGA	4145	42.677643	5
GCGAAAG	545	42.620228	2
GGATAGC	1140	42.609367	5
AGGTACT	1060	41.72341	4
CAGGTAC	1070	41.34724	3
TCGCCAT	4015	39.540493	145
AGAGGTC	4490	39.392788	9
ATTAGTA	4590	39.34478	3
TATACTG	1075	37.767193	5
TTAGTAG	4955	36.434387	4
ACTGATC	1900	35.863068	8
TAGAGGT	5220	33.744965	8
GCGGTAT	1015	33.567215	6