HNG7HBGXG_n01_2248_d08.2_replicate2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HNG7HBGXG_n01_2248_d08.2_replicate2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2360107
Sequences flagged as poor quality	0
Sequence length	151
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGCAGGTACTGATCCAAAATGGAAGACTTTGTGCGACAGTGCTTCAATCC	6842	0.2899021103704197	No Hit
GTATGGATAGCAAATAGTAGCATTGCCACAACTATTTTAGTGCATGTGTG	6002	0.25431050371868735	No Hit
AGTAGAAACAAGGCATTTTTTCATGAAGGACAAGCCAAATTCACTTCCCT	5589	0.23681129711491897	No Hit
CCCTTATACTGGAGATCCCCCATATAGCCATGGAACAGGAACAGGATACA	5365	0.2273202020077903	No Hit
TTTTTGGACAGTATGGATAGCAAATAGTAGCATTGCCACAACTATTTTAG	4459	0.18893211197627904	No Hit
CTTCAATGGTGGAACAGATCTTCAAGATCTCAGCAAATTCTTCTTTCTTA	3805	0.16122150394028745	No Hit
TTCTTAATCCTTCCAGACTCGAAGTCAATCCGTGCATCAATTCGGGCCCT	2567	0.10876625508928198	No Hit
GTATTATTTTTTCATTTACCTCAAAGTATTTCTGTGTTCCTATTTTGGTT	2566	0.10872388412898229	No Hit
ATTTTAGTGCATGTGTGAGGAAGGAGTTGAACCAAGATGCATTAAGCAAA	2498	0.10584265882860396	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTACTG	1525	0.0	63.720364	5
GTACTGA	1695	0.0	57.330746	6
GTAGAAA	2115	0.0	55.20017	2
GCAGGTA	1760	0.0	54.38588	2
ACTGATC	2090	0.0	49.954735	8
ACAAGGC	2005	0.0	46.6483	8
AGCGAAA	620	0.0	45.613964	1
AGGTACT	2245	0.0	45.22158	4
GTATGGA	2305	0.0	44.043518	1
AGCAGGT	2280	0.0	42.30013	1
GACAGTA	1430	0.0	41.575577	7
ACCGTAC	70	0.001055894	41.43686	1
TGGATAG	2430	0.0	40.88353	4
CAGGTAC	2430	0.0	40.58511	3
TTGGACA	1645	0.0	39.67443	4
ATAGCAA	2540	0.0	39.3918	7
ATGGATA	2565	0.0	39.297195	3
GCGAAAG	735	0.0	38.477085	2
GGATAGC	2640	0.0	37.906918	5
TAGAAAC	3210	0.0	37.2746	3