HNG7HBGXG_n01_2231_d12_replicate1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HNG7HBGXG_n01_2231_d12_replicate1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1775597
Sequences flagged as poor quality	0
Sequence length	151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTTCTATACCACTGTGGTTGGAAAAGATGGTTGATTTGATTTCAGTCCTC	3774	0.21254823025720362	No Hit
GTTGACATGGTCCTATGATGTTGATCCTTCGTTTTGTGAATGCGGCCCAT	3324	0.18720464159378508	No Hit
GCAGTGCAGCAACTAAATATGTAGAGCATATATGAACAAACCTAAGAGAA	2882	0.16231160561771618	No Hit
TTACCCACCCAGCATGGAGCAACTAAATATGTAGAGCATATATGAACAAA	2783	0.1567360161117641	No Hit
ATCTAAAATATCTCCCCATCCCATTACTCCCTGTCAAAGCCCTTTGTATC	2669	0.1503156403170314	No Hit
ATCTATGATGAACACAAACATAAAAATGCTCACCCAAATATCTGCAAACC	2547	0.14344471183494903	No Hit
GTAGCATGTTGTTTAGTCTCTGTGTTTATGAATTTCCAGTTTTCTTCTTG	2545	0.14333207366311163	No Hit
GCATGGAGCAACTAAATATGTAGAGCATATATGAACAAACCTAAGAGAAG	2449	0.13792544141491564	No Hit
GTCTTTTTCTTTAGGATTCAATCTTAGTAGGTTGTATGTTTCTGGAAATG	2293	0.1291396640115972	No Hit
CTATACCACTGTGGTTGGAAAAGATGGTTGATTTGATTTCAGTCCTCATT	2203	0.12407094627891352	No Hit
AAGTTGGAGAACGTTCTAGGGGCACTTGAGAGGAGTATATTCCTTTTGCT	2135	0.12024124843644138	No Hit
ATCTTAGTAGGTTGTATGTTTCTGGAAATGTATCCTTTTCTTTTGGATTA	2111	0.11888959037439238	No Hit
TTACTGCCCCAGCATGGAGCAACTAAATATGTAGAGCATATATGAACAAA	2007	0.11303240543884677	No Hit
GTTGACATGGTCCTATGATGTTGATCCTTTGTTTTGTGAATGCGGCACAT	1995	0.11235657640782228	No Hit
GTTTTCTTCTTGTAATTGATTTCTAGTTCTATACCACTGTGGTTGGAAAA	1960	0.11038540840066749	No Hit
GTTTTTTAGTCTCTGTGTTTATGAATTTCCAGTTTTCTTCTTGGAATTGA	1896	0.10678098690187018	No Hit
CTTATATGGACTTGACAGATACACACAGAACCCTCCATCCAAAAGCAGCA	1856	0.10452822346512186	No Hit
AGTCTGTTCAGATGTCTTTTTCTTTAGGATTCAATCTTAGTAGGTTGTAT	1835	0.103345522660829	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTGACA	2015	0.0	56.854546	1
ACATGGT	2125	0.0	53.23056	5
GACATGG	2605	0.0	43.143894	4
GGTCCTA	3215	0.0	42.395847	9
GTTACGT	140	1.4142643E-8	41.432877	1
TGGTCCT	3300	0.0	41.304996	8
ATGGTCC	3345	0.0	40.966076	7
GCAGTGC	1595	0.0	40.004158	1
CAGTGCA	1625	0.0	39.71294	2
TACTGCG	75	0.0014827341	38.671772	5
TCTCCGC	510	0.0	38.38202	145
AGTGCAG	1710	0.0	37.7389	3
CATGGTC	3085	0.0	37.37228	6
GCTACTA	605	0.0	37.14948	9
ATCTATG	1510	0.0	35.533493	1
CACGAGC	410	0.0	35.365543	145
AGCGAAA	370	0.0	35.273933	1
TGACATG	3330	0.0	34.839436	3
AGTCCGC	150	1.1346274E-6	33.83304	145
CTCCGAC	150	1.1346274E-6	33.83304	145