[2025-01-07 21:43:15,894] multiqc [DEBUG ] No MultiQC config found: /share/apps/multiqc/1.9/lib/python3.8/site-packages/multiqc_config.yaml [2025-01-07 21:43:15,894] multiqc [DEBUG ] No MultiQC config found: /home/gencore/.multiqc_config.yaml [2025-01-07 21:43:15,894] multiqc [DEBUG ] No MultiQC config found: multiqc_config.yaml [2025-01-07 21:43:15,896] multiqc [DEBUG ] Loading config settings from: /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml [2025-01-07 21:43:15,897] multiqc [DEBUG ] New config 'report_section_order': {'general_stats': {'order': 1000}, 'demux_report': {'order': 900}, 'demux_report-1': {'order': 900}, 'demux_report-2': {'order': 900}, 'undetermined_barcodes': {'order': 800}, 'run_stats': {'order': 700}, 'fastqc': {'order': 500}} [2025-01-07 21:43:15,897] multiqc [DEBUG ] Command used: /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml . [2025-01-07 21:43:16,150] multiqc [DEBUG ] Could not connect to multiqc.info for version check: [2025-01-07 21:43:16,150] multiqc [INFO ] This is MultiQC v1.9 [2025-01-07 21:43:16,150] multiqc [DEBUG ] Command : /share/apps/multiqc/1.9/bin/multiqc -f -c /home/gencore/SCRIPTS/GENEFLOW/bin/mqc_config.yaml . [2025-01-07 21:43:16,150] multiqc [DEBUG ] Working dir : /scratch/gencore/GENEFLOW/work/nf/7d/43be6e1e5e9948e088b9494dfd5587/merged [2025-01-07 21:43:16,150] multiqc [INFO ] Template : default [2025-01-07 21:43:16,150] multiqc [DEBUG ] Running Python 3.8.6 (default, Oct 11 2020, 20:34:31) [GCC Intel(R) C++ gcc 8.3.1 mode] [2025-01-07 21:43:16,150] multiqc [INFO ] Searching : /scratch/gencore/GENEFLOW/work/nf/7d/43be6e1e5e9948e088b9494dfd5587/merged [2025-01-07 21:43:16,150] multiqc [DEBUG ] Analysing modules: custom_content, conpair, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, goleft_indexcov, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, homer, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dedup, damageprofiler, biobambam2, mtnucratio, picard, prokka, samblaster, samtools, sexdeterrmine, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, bbmap, bismark, biscuit, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, snpsplit, kat, leehom, adapterRemoval, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, pycoqc, minionqc, multivcfanalyzer, clusterflow, bcl2fastq, interop, ivar, flash, seqyclean [2025-01-07 21:43:16,150] multiqc [DEBUG ] Using temporary directory for creating report: /state/partition1/job-55659186/tmpuxjqqbuq [2025-01-07 21:43:16,274] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HNFNGDRX5_n01_Rep_3-1-1_rc_fastqc.html [2025-01-07 21:43:16,277] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HNFNGDRX5_n01_Rep_3-1-1_rc_fastqc.html [2025-01-07 21:43:16,335] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2025-01-07 21:43:16,337] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: undetermined_barcodes.txt [2025-01-07 21:43:16,428] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HNFNGDRX5_n02_Rep_3-1-2_rc_fastqc.html [2025-01-07 21:43:16,430] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HNFNGDRX5_n02_Rep_3-1-2_rc_fastqc.html [2025-01-07 21:43:16,498] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HNFNGDRX5_n01_Rep_2-1-1_rc_fastqc.html [2025-01-07 21:43:16,500] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HNFNGDRX5_n01_Rep_2-1-1_rc_fastqc.html [2025-01-07 21:43:16,558] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HNFNGDRX5_n01_undetermined_fastqc.html [2025-01-07 21:43:16,560] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HNFNGDRX5_n01_undetermined_fastqc.html [2025-01-07 21:43:16,611] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HNFNGDRX5_n02_undetermined_fastqc.html [2025-01-07 21:43:16,613] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HNFNGDRX5_n02_undetermined_fastqc.html [2025-01-07 21:43:16,673] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HNFNGDRX5_n02_Rep_2-1-2_rc_fastqc.html [2025-01-07 21:43:16,675] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HNFNGDRX5_n02_Rep_2-1-2_rc_fastqc.html [2025-01-07 21:43:16,738] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HNFNGDRX5_n01_Rep_2-2_rc_fastqc.html [2025-01-07 21:43:16,740] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HNFNGDRX5_n01_Rep_2-2_rc_fastqc.html [2025-01-07 21:43:16,801] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HNFNGDRX5_n01_Rep_3-2_rc_fastqc.html [2025-01-07 21:43:16,803] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HNFNGDRX5_n01_Rep_3-2_rc_fastqc.html [2025-01-07 21:43:16,863] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HNFNGDRX5_n01_Rep_3-1-2_rc_fastqc.html [2025-01-07 21:43:16,865] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HNFNGDRX5_n01_Rep_3-1-2_rc_fastqc.html [2025-01-07 21:43:16,924] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HNFNGDRX5_n01_Rep_2-1-2_rc_fastqc.html [2025-01-07 21:43:16,926] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HNFNGDRX5_n01_Rep_2-1-2_rc_fastqc.html [2025-01-07 21:43:16,984] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HNFNGDRX5_n02_Rep_2-2_rc_fastqc.html [2025-01-07 21:43:16,986] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HNFNGDRX5_n02_Rep_2-2_rc_fastqc.html [2025-01-07 21:43:17,052] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HNFNGDRX5_n02_Rep_3-1-1_rc_fastqc.html [2025-01-07 21:43:17,054] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HNFNGDRX5_n02_Rep_3-1-1_rc_fastqc.html [2025-01-07 21:43:17,054] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: HNFNGDRX5_n02_Rep_3-1-1_rc_fastqc.html [2025-01-07 21:43:17,054] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: HNFNGDRX5_n02_Rep_3-1-1_rc_fastqc.html [2025-01-07 21:43:17,054] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: HNFNGDRX5_n02_Rep_3-1-1_rc_fastqc.html [2025-01-07 21:43:17,054] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: HNFNGDRX5_n02_Rep_3-1-1_rc_fastqc.html [2025-01-07 21:43:17,054] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: HNFNGDRX5_n02_Rep_3-1-1_rc_fastqc.html [2025-01-07 21:43:17,139] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HNFNGDRX5_n02_Rep_2-1-1_rc_fastqc.html [2025-01-07 21:43:17,141] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HNFNGDRX5_n02_Rep_2-1-1_rc_fastqc.html [2025-01-07 21:43:17,141] multiqc [DEBUG ] File ignored by rockhopper because it exceeded search pattern filesize limit: HNFNGDRX5_n02_Rep_2-1-1_rc_fastqc.html [2025-01-07 21:43:17,141] multiqc [DEBUG ] File ignored by rseqc/bam_stat because it exceeded search pattern filesize limit: HNFNGDRX5_n02_Rep_2-1-1_rc_fastqc.html [2025-01-07 21:43:17,141] multiqc [DEBUG ] File ignored by rseqc/junction_annotation because it exceeded search pattern filesize limit: HNFNGDRX5_n02_Rep_2-1-1_rc_fastqc.html [2025-01-07 21:43:17,141] multiqc [DEBUG ] File ignored by rseqc/read_distribution because it exceeded search pattern filesize limit: HNFNGDRX5_n02_Rep_2-1-1_rc_fastqc.html [2025-01-07 21:43:17,141] multiqc [DEBUG ] File ignored by rseqc/infer_experiment because it exceeded search pattern filesize limit: HNFNGDRX5_n02_Rep_2-1-1_rc_fastqc.html [2025-01-07 21:43:17,223] multiqc [DEBUG ] File ignored by hicexplorer because it exceeded search pattern filesize limit: HNFNGDRX5_n02_Rep_3-2_rc_fastqc.html [2025-01-07 21:43:17,225] multiqc [DEBUG ] File ignored by longranger/invocation because it exceeded search pattern filesize limit: HNFNGDRX5_n02_Rep_3-2_rc_fastqc.html [2025-01-07 21:43:17,757] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.3.2 [2025-01-07 21:43:17,759] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.3.2 [2025-01-07 21:43:17,769] multiqc.modules.custom_content.custom_content [INFO ] demux_report: Found 7 samples (table) [2025-01-07 21:43:17,771] multiqc.modules.custom_content.custom_content [INFO ] run_stats: Found 1 samples (table) [2025-01-07 21:43:17,781] multiqc.modules.custom_content.custom_content [INFO ] undetermined_barcodes: Found 20 samples (table) [2025-01-07 21:43:17,787] multiqc [DEBUG ] No samples found: conpair [2025-01-07 21:43:17,794] multiqc [DEBUG ] No samples found: peddy [2025-01-07 21:43:17,800] multiqc [DEBUG ] No samples found: somalier [2025-01-07 21:43:17,806] multiqc [DEBUG ] No samples found: methylQA [2025-01-07 21:43:17,817] multiqc [DEBUG ] No samples found: mosdepth [2025-01-07 21:43:17,823] multiqc [DEBUG ] No samples found: phantompeakqualtools [2025-01-07 21:43:17,827] multiqc [DEBUG ] No samples found: qualimap [2025-01-07 21:43:17,832] multiqc [DEBUG ] No samples found: preseq [2025-01-07 21:43:17,838] multiqc [DEBUG ] No samples found: quast [2025-01-07 21:43:17,845] multiqc [DEBUG ] No samples found: qorts [2025-01-07 21:43:17,850] multiqc [DEBUG ] No samples found: rna_seqc [2025-01-07 21:43:17,856] multiqc [DEBUG ] No samples found: rockhopper [2025-01-07 21:43:17,862] multiqc [DEBUG ] No samples found: rsem [2025-01-07 21:43:17,876] multiqc [DEBUG ] No samples found: rseqc [2025-01-07 21:43:17,882] multiqc [DEBUG ] No samples found: busco [2025-01-07 21:43:17,888] multiqc [DEBUG ] No samples found: goleft_indexcov [2025-01-07 21:43:17,894] multiqc [DEBUG ] No samples found: disambiguate [2025-01-07 21:43:17,900] multiqc [DEBUG ] No samples found: supernova [2025-01-07 21:43:17,917] multiqc [DEBUG ] No samples found: deeptools [2025-01-07 21:43:17,924] multiqc [DEBUG ] No samples found: sargasso [2025-01-07 21:43:17,930] multiqc [DEBUG ] No samples found: verifybamid [2025-01-07 21:43:17,936] multiqc [DEBUG ] No samples found: mirtrace [2025-01-07 21:43:17,942] multiqc [DEBUG ] No samples found: happy [2025-01-07 21:43:17,948] multiqc [DEBUG ] No samples found: mirtop [2025-01-07 21:43:17,956] multiqc [DEBUG ] No samples found: homer [2025-01-07 21:43:17,961] multiqc [DEBUG ] No samples found: macs2 [2025-01-07 21:43:17,967] multiqc [DEBUG ] No samples found: theta2 [2025-01-07 21:43:17,973] multiqc [DEBUG ] No samples found: snpeff [2025-01-07 21:43:17,981] multiqc [DEBUG ] No samples found: gatk [2025-01-07 21:43:17,987] multiqc [DEBUG ] No samples found: htseq [2025-01-07 21:43:17,993] multiqc [DEBUG ] No samples found: bcftools [2025-01-07 21:43:17,999] multiqc [DEBUG ] No samples found: featureCounts [2025-01-07 21:43:18,007] multiqc [DEBUG ] No samples found: fgbio [2025-01-07 21:43:18,023] multiqc [DEBUG ] No samples found: dragen [2025-01-07 21:43:18,029] multiqc [DEBUG ] No samples found: dedup [2025-01-07 21:43:18,035] multiqc [DEBUG ] No samples found: damageprofiler [2025-01-07 21:43:18,062] multiqc [DEBUG ] No samples found: biobambam2 [2025-01-07 21:43:18,069] multiqc [DEBUG ] No samples found: mtnucratio [2025-01-07 21:43:18,072] multiqc [DEBUG ] No samples found: picard [2025-01-07 21:43:18,078] multiqc [DEBUG ] No samples found: prokka [2025-01-07 21:43:18,083] multiqc [DEBUG ] No samples found: samblaster [2025-01-07 21:43:18,094] multiqc [DEBUG ] No samples found: samtools [2025-01-07 21:43:18,100] multiqc [DEBUG ] No samples found: sexdeterrmine [2025-01-07 21:43:18,107] multiqc [DEBUG ] No samples found: bamtools [2025-01-07 21:43:18,113] multiqc [DEBUG ] No samples found: jellyfish [2025-01-07 21:43:18,125] multiqc [DEBUG ] No samples found: vcftools [2025-01-07 21:43:18,131] multiqc [DEBUG ] No samples found: longranger [2025-01-07 21:43:18,138] multiqc [DEBUG ] No samples found: stacks [2025-01-07 21:43:18,144] multiqc [DEBUG ] No samples found: varscan2 [2025-01-07 21:43:18,162] multiqc [DEBUG ] No samples found: bbmap [2025-01-07 21:43:18,168] multiqc [DEBUG ] No samples found: bismark [2025-01-07 21:43:18,175] multiqc [DEBUG ] No samples found: biscuit [2025-01-07 21:43:18,181] multiqc [DEBUG ] No samples found: hicexplorer [2025-01-07 21:43:18,188] multiqc [DEBUG ] No samples found: hicup [2025-01-07 21:43:18,194] multiqc [DEBUG ] No samples found: hicpro [2025-01-07 21:43:18,200] multiqc [DEBUG ] No samples found: salmon [2025-01-07 21:43:18,205] multiqc [DEBUG ] No samples found: kallisto [2025-01-07 21:43:18,211] multiqc [DEBUG ] No samples found: slamdunk [2025-01-07 21:43:18,216] multiqc [DEBUG ] No samples found: star [2025-01-07 21:43:18,222] multiqc [DEBUG ] No samples found: hisat2 [2025-01-07 21:43:18,227] multiqc [DEBUG ] No samples found: tophat [2025-01-07 21:43:18,233] multiqc [DEBUG ] No samples found: bowtie2 [2025-01-07 21:43:18,238] multiqc [DEBUG ] No samples found: bowtie1 [2025-01-07 21:43:18,244] multiqc [DEBUG ] No samples found: snpsplit [2025-01-07 21:43:18,249] multiqc [DEBUG ] No samples found: kat [2025-01-07 21:43:18,254] multiqc [DEBUG ] No samples found: leehom [2025-01-07 21:43:18,261] multiqc [DEBUG ] No samples found: adapterRemoval [2025-01-07 21:43:18,266] multiqc [DEBUG ] No samples found: clipandmerge [2025-01-07 21:43:18,272] multiqc [DEBUG ] No samples found: cutadapt [2025-01-07 21:43:18,278] multiqc [DEBUG ] No samples found: flexbar [2025-01-07 21:43:18,283] multiqc [DEBUG ] No samples found: kaiju [2025-01-07 21:43:18,289] multiqc [DEBUG ] No samples found: kraken [2025-01-07 21:43:18,295] multiqc [DEBUG ] No samples found: malt [2025-01-07 21:43:18,301] multiqc [DEBUG ] No samples found: trimmomatic [2025-01-07 21:43:18,306] multiqc [DEBUG ] No samples found: sickle [2025-01-07 21:43:18,312] multiqc [DEBUG ] No samples found: skewer [2025-01-07 21:43:18,318] multiqc [DEBUG ] No samples found: sortmerna [2025-01-07 21:43:18,323] multiqc [DEBUG ] No samples found: biobloomtools [2025-01-07 21:43:18,329] multiqc [DEBUG ] No samples found: fastq_screen [2025-01-07 21:43:18,335] multiqc [DEBUG ] No samples found: afterqc [2025-01-07 21:43:18,341] multiqc [DEBUG ] No samples found: fastp [2025-01-07 21:43:19,143] multiqc.modules.fastqc.fastqc [INFO ] Found 14 reports [2025-01-07 21:43:19,365] multiqc [DEBUG ] No samples found: pycoqc [2025-01-07 21:43:19,371] multiqc [DEBUG ] No samples found: minionqc [2025-01-07 21:43:19,376] multiqc [DEBUG ] No samples found: multivcfanalyzer [2025-01-07 21:43:19,382] multiqc [DEBUG ] No samples found: clusterflow [2025-01-07 21:43:19,389] multiqc [DEBUG ] No samples found: bcl2fastq [2025-01-07 21:43:19,395] multiqc [DEBUG ] No samples found: interop [2025-01-07 21:43:19,400] multiqc [DEBUG ] No samples found: ivar [2025-01-07 21:43:19,406] multiqc [DEBUG ] No samples found: flash [2025-01-07 21:43:19,411] multiqc [DEBUG ] No samples found: seqyclean [2025-01-07 21:43:19,411] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found. [2025-01-07 21:43:19,411] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found. [2025-01-07 21:43:19,411] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found. [2025-01-07 21:43:19,411] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Demultiplexing Report'. [2025-01-07 21:43:19,411] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Demultiplexing Report'. [2025-01-07 21:43:19,411] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Demultiplexing Report'. [2025-01-07 21:43:19,411] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Demultiplexing Report'. [2025-01-07 21:43:19,411] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Demultiplexing Report'. [2025-01-07 21:43:19,411] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Demultiplexing Report'. [2025-01-07 21:43:19,411] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module ' Barcodes of Undetermined Reads'. [2025-01-07 21:43:19,411] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module ' Barcodes of Undetermined Reads'. [2025-01-07 21:43:19,411] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module ' Barcodes of Undetermined Reads'. [2025-01-07 21:43:19,411] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module ' Barcodes of Undetermined Reads'. [2025-01-07 21:43:19,411] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module ' Barcodes of Undetermined Reads'. [2025-01-07 21:43:19,411] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module ' Barcodes of Undetermined Reads'. [2025-01-07 21:43:19,411] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module ' Barcodes of Undetermined Reads'. [2025-01-07 21:43:19,411] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'Run Statistics'. [2025-01-07 21:43:19,411] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'Run Statistics'. [2025-01-07 21:43:19,411] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'Run Statistics'. [2025-01-07 21:43:19,411] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'Run Statistics'. [2025-01-07 21:43:19,411] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'Run Statistics'. [2025-01-07 21:43:19,412] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'Run Statistics'. [2025-01-07 21:43:19,412] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'Run Statistics'. [2025-01-07 21:43:19,412] multiqc [DEBUG ] Reordering sections: anchor 'general_stats' not found for module 'FastQC'. [2025-01-07 21:43:19,412] multiqc [DEBUG ] Reordering sections: anchor 'demux_report' not found for module 'FastQC'. [2025-01-07 21:43:19,412] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-1' not found for module 'FastQC'. [2025-01-07 21:43:19,412] multiqc [DEBUG ] Reordering sections: anchor 'demux_report-2' not found for module 'FastQC'. [2025-01-07 21:43:19,412] multiqc [DEBUG ] Reordering sections: anchor 'undetermined_barcodes' not found for module 'FastQC'. [2025-01-07 21:43:19,412] multiqc [DEBUG ] Reordering sections: anchor 'run_stats' not found for module 'FastQC'. [2025-01-07 21:43:19,412] multiqc [DEBUG ] Reordering sections: anchor 'fastqc' not found for module 'FastQC'. [2025-01-07 21:43:19,430] multiqc [INFO ] Compressing plot data [2025-01-07 21:43:19,683] multiqc [INFO ] Report : multiqc_report.html [2025-01-07 21:43:19,683] multiqc [INFO ] Data : multiqc_data [2025-01-07 21:43:19,683] multiqc [DEBUG ] Moving data file from '/state/partition1/job-55659186/tmpuxjqqbuq/multiqc_data' to '/scratch/gencore/GENEFLOW/work/nf/7d/43be6e1e5e9948e088b9494dfd5587/merged/multiqc_data' [2025-01-07 21:43:19,830] multiqc [INFO ] MultiQC complete