FastQCFastQC Report
Sat 26 Sep 2020
HNCVFBGXG_n02_FD_S3_R2_G01.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCVFBGXG_n02_FD_S3_R2_G01.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATATGTGCAGTTGGACATGTAGCAATTTTATGGTATGTTGTTTAGATGG15.555555555555555No Hit
TCATACAACATTAGTTAAGTTTTACGTTTACTATAGAAATCTAAAAAATG15.555555555555555No Hit
GGACATTGTGATATGGTGCACAAAACCAACACCAAAGCTTGGCTCTTGCT15.555555555555555No Hit
TTTTTAAAGAGGGGTTAGACGTAAGCATGTTTACAGCAGCCACAGAAGGG15.555555555555555No Hit
GTAAAATAATTATCGAGTAGTTCAAGATGATCAATGTGAGAAATAATTTG15.555555555555555No Hit
AATGTGCACTCAACACAAACTCAGAGATTATGAGGGACGACTAATCCACA15.555555555555555No Hit
GGTAAAGTAGGAAATTCTGATCATAAAAACTTAACTTTGGTATACTCAAG15.555555555555555No Hit
CTCCTCTTCAAAATTCCATCTTCCCCTTGGGTTAGTCCTTTCATATCACC15.555555555555555No Hit
CAGCAAGAGAGGGAACACGAGCAGGGGAAGTGGGAAAGGGAGAAGCAGGC15.555555555555555No Hit
CTTCAGTAAGGATGCTGAGAATGTCTTCTCCCCTGAAAAACAACAGCACT15.555555555555555No Hit
CTTCTATAGGATTGTTGGCTATCCGTATGTCTTGGTTGGAGAAATATCTT15.555555555555555No Hit
GTTCTTAAAGTGTGCTCTCTGGACAACAACATTAGTATCTGCTGGGAATT15.555555555555555No Hit
TTTTCAAGGATAGATCATATGTCAGGCCACAAAACAAGTCTTAATAAATT15.555555555555555No Hit
CTTGGTAGGTATGTCATTTGTTGCGGAAACACCATCATTCTTAGGTCCAA15.555555555555555No Hit
TTTGTATTCAGATTGTCACGTCTTAATGACTGAACTTTAAGACAATGAGT15.555555555555555No Hit
GCATGAACCTCAATTACAACAGAAATCGAACAGTGACCACAGAAACTAAT15.555555555555555No Hit
CCCCTGCTGCCTGCCCCTTTCAGCAGCACTGGAAGTCTCTGGAGATGAGG15.555555555555555No Hit
CATGTCGCCTTTTTCTTTGGTGTAGACCTGGATGCACAAGGCTTTTGATC15.555555555555555No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)