FastQCFastQC Report
Fri 2 Oct 2020
HNCVFBGXG_n02_FD_S3_R2_C08.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCVFBGXG_n02_FD_S3_R2_C08.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAATTGCATCCTACTCTGTTCTGGTGGGGCAGCAGCAAATGCGGGATGTG16.25No Hit
CCCCAAGATCGAAGGTTCCAGGTTCCAGGTTGTCCCTAAGTGCCTGAACA16.25No Hit
TCCATAATCACATCCTGTGCCTCCTTGGCACTGAGATCTGCATGGCCAGG16.25No Hit
GTTTAAGGTCTCCAACATCTTTGCAGTCATCAAAGTCTACTTTTTCTGGT16.25No Hit
GAGATACCCAATTACAGCAGACAAGAGAATAGTATTCAATTACAACAAGG16.25No Hit
GGATCATTAATCAGGCACTCCTCGATTGCTTCATATAGCCCCCCAAGATC16.25No Hit
CCATACAGCCATGGAACAGGAACAGGATACACCATGGACACAGTAAACAG16.25No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT16.25No Hit
GTGGTAGGCTATGTAAAAATTCTTTGCTACTACTGAAAAAACAGAAACTA16.25No Hit
GTATGTGCAGTTGGGGGAAGAGGAGAGTGGGACACAAGCACTCCCACTGA16.25No Hit
GAGAACTCTTCTTTCTTGATCCGTCCAGACTCGAAGTCGACCCTGGCATC16.25No Hit
ATGTATACGTGCTATTTACATAATAAGGAAAATGTACTTTAAATAGATGT16.25No Hit
GATATGTTCCCTCTACACTGTGAAGAGTTTTAATCAAGAAGGGGTGCTGA16.25No Hit
TCTTTGCCCAAAATGAGAAATCCTCTCAGGACAGCAGACTCCACCCCAGA16.25No Hit
TAGTAGCATTGCCACAACTACTTCAGTGCATGTGTGAGGAAGGAGTTGAA16.25No Hit
CTCGTTCTGTTCCCTAATACTCATGCTGTCTTCAACCAAACTTCCAAAAT16.25No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)