FastQCFastQC Report
Sat 26 Sep 2020
HNCVFBGXG_n02_FD_S3_R2_C05.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCVFBGXG_n02_FD_S3_R2_C05.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAACAGGATGGGAACAGTGACCACAGAAGCTGCTTTTGGTCTAGTGTGTG15.263157894736842No Hit
AAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA15.263157894736842No Hit
CTTGCAGGTCCTGTAGAATGTTTACGCGGGTGATTGTGATCCCGCATGGT15.263157894736842No Hit
GTAAAATTGAAAACTAGATGATGGAGAAAAACCAAGAAACAGAATTGGAC15.263157894736842No Hit
CCAGAGGGAAGGTCATTGAACTCTATGTCTCTTCAGAATCTCTTGTCGTC15.263157894736842No Hit
CTTCTGGTACATCTGTTCATCCTCAAGAATTCCCCTTTGGCTTGTGTTGA15.263157894736842No Hit
AAACAAATCTAAACTCAGAAAATATATTGCACGAATCGTGCTCTGCAATA15.263157894736842No Hit
GAGTTAAAGAAGCTGTGGGATCAAACCCAATCAAAGGTAGGGCTATTAGT15.263157894736842No Hit
GAGTAGGATGAAATTTTCCTCATTGACTGTGAATGTGAGAGGATCATGGT15.263157894736842No Hit
TAGCAAATAGTAGCATTGCCACAACTACTTCAGTGCATGTGTGAGGAAGG15.263157894736842No Hit
CTATTGAAGCACCGATTTGAGATAATTGAAGGAAGAGACCGAATCATGGC15.263157894736842No Hit
GTCAAATTTTTAAGTCTTTCCATTACATAGAACGTGCGCTCTTTTGTGAT15.263157894736842No Hit
ACTATAATCTAGGTATTAATTCAAGATCGACACTCTAAAGTTATAAACTT15.263157894736842No Hit
GGTCATCGTATTTAAGGTCAGTGCTCTTATTAGATAGCGTCTCTTATTAA15.263157894736842No Hit
GTCTAAAGATGGTAGAACTGTATGGTCTTTTCGAGGAGGAGACAATGGCA15.263157894736842No Hit
CTTCAGGTCAATGCTTGCTAGCATTTCTGCTGGTATTTGTGTTCGAATCT15.263157894736842No Hit
GCAATTGACTGCTCGTCTCTCCCGCTTACTATCAACTGGATCAATCTCCT15.263157894736842No Hit
ATATGTAATCATCGCCAGGAACATTCGAGGATTTAGATATTCATTCCACT15.263157894736842No Hit
CACTAAGACCACTGTGGACAATATGGCCATAATCAAAAAGTACACATCAG15.263157894736842No Hit

[WARN]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)