FastQCFastQC Report
Sat 26 Sep 2020
HNCVFBGXG_n02_FD_S3_R2_A01.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCVFBGXG_n02_FD_S3_R2_A01.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACTTCTGCTGTAAAATAGTTCCTCCTCATGCTTGCGATATGTTCAATCG14.761904761904762No Hit
TCAATGATGTGGGAGATCAATGGCCCTGAGTCAGTGCTAGTCAACACTTA14.761904761904762No Hit
ATGCAACAGCAGGTCTTACTCATATCATGATTTGGCATTCCAACCTGAAT14.761904761904762No Hit
ACTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGA14.761904761904762No Hit
ATACTACTAAGGGCTTTCACTGAGGAGGGAGCAATAGTTGGAGAAATTTC14.761904761904762No Hit
GCGGGGTTGGGGGTCCGGGGGGGCGGCGGGCGGGGGGGGGGGGGGGGGGG14.761904761904762No Hit
GTGCAGGACCTTACTGGCAAAATCTGTATTCAACAGTCTATATGCGTCTC14.761904761904762No Hit
CTTCTGGTACATCTGTTCATCCTCAAGAATTCCCCTTTGGCTTGTGTTGA14.761904761904762No Hit
GACTAGGGAAAGGGTACATGTTCGAGAGTAAAAGAATGAAGATTCGAACA14.761904761904762No Hit
CCATTTCATCGACGAACGGGGTGAATCAATAATTGTAGAATCTGGTGACC14.761904761904762No Hit
ATATAGTGGTATTCCCTCCCCCTCGTGACTCGGGTCTTCAATACTTAATT14.761904761904762No Hit
CATCTTCTCCTATTTCATCAAGTTCTATCCAGCTTGAATCAGTCAATTCA14.761904761904762No Hit
TCCTGTGCCTCCTTGGCACTGAGATCTGCATGGCCAGGGTTTGTATCAAC14.761904761904762No Hit
TGCCTAGGCAAAAGATAATAGGCCCTCTTTGCGTGCGATTGGACCAGGCG14.761904761904762No Hit
CTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGATGCTTAATGCTGGGC14.761904761904762No Hit
CCATAGAAGTCTTTAGATCGAATGGCCTAACAGCTAATGAGTCAGGAAGG14.761904761904762No Hit
ATATCAGGTGCAAGATCCCAATGATATTTGCTGCAATGACGAGAGGATCA14.761904761904762No Hit
ATCCTACTAAGGTCTGGGGGGGCAGCAGCAAAGGGGAGAAGGTTTATTAT14.761904761904762No Hit
TACCAGTACCAATGAACTGGCGACAGTTGAATAGATCGCCAAAATCTGGT14.761904761904762No Hit
AAAGAGAATTGGTCCGTAAAACAAGGTTTCTCCCAGTAGCCGGCGGAACA14.761904761904762No Hit
GACGAGAAGATCATTTGAGTTAAAGAAGCTGTGGGATCAAACCCAATCAA14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)