FastQCFastQC Report
Sat 26 Sep 2020
HNCVFBGXG_n01_FD_S4_R2_B04.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCVFBGXG_n01_FD_S4_R2_B04.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTACAGGACCTGCAAGTTAGTGGGAATCAACATGAGCAAAAAGAAGTCCT21.9801980198019802No Hit
TGTCAAAGGAAGGCACGATCGGGTTCGTTGCCTTTTCGTCCGAGAGCTCG21.9801980198019802No Hit
AAGCAAAACCCAGGGATCATTAATCAGGCACTCCTCGATTGCTTCATATA21.9801980198019802No Hit
ATTACAAAGAGAACCGGTTCATTGAAATTGGAGTAACACGGAGGGAAGTC10.9900990099009901No Hit
GCCCTCTGGGCAGCTGTTTGAAATTTTACTTTGAGGATTTTGCACATACT10.9900990099009901No Hit
CTTATTAGATAGCCTCTCTTATTCAGTCTTTGTTTTTTCTTCCCTATTGT10.9900990099009901No Hit
CAATTGGCTTGTTCTCTTCATGTTCTTTGTCCTTGGGATCTTCTCTTCAT10.9900990099009901No Hit
GATAACAACCCACTTTCAAAGAAAAAGGAGAGTAAGAGACAACATGACCA10.9900990099009901No Hit
GAGAGAGTGGTAGTGAGTATTGACCGATTTTTAAGGGTTAGAGATCAAAG10.9900990099009901No Hit
GAGGCAAGTTAAAAAGAAGGGCTATCGCAACACCTGGGATGCAGATTAGA10.9900990099009901No Hit
CACTACGTCCCCTTGCCCAATTAGCACATTAGTCTTCTCTCCTTTTGCAA10.9900990099009901No Hit
GTGCTCTTATTAGATAGCCTCTCTTATTCAGTCTTTGTTTTTTCTTCCCT10.9900990099009901No Hit
AACCATGGTACCTTCGGCCCGGTCCACTTCAGAAATCAAGTTAAAATAAG10.9900990099009901No Hit
CGCGGCTATCCCAAGCGGCGGCTGAGTTGCGCCCCTACCAACCTGAGATT10.9900990099009901No Hit
TAAGGACACTGTTCCAGCAAATGCGGGATGTGCTTGGGACATTTGACACT10.9900990099009901No Hit
TCTGCATTGTCTCCGAAGAAATAAGACCCTTCATTACTCATGTCAAAGGA10.9900990099009901No Hit
CTGCTGAAGAGACTGAAGAAGGCAGCGCCTCATTTCCATGCCCCATTTCA10.9900990099009901No Hit
GCCTTGATCATGCAATCCTCCTGTGAGAATACCATGGCCACAATTATTGC10.9900990099009901No Hit
CCCTTATACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGATACA10.9900990099009901No Hit
CTGCACTCCCATTCGCTTCTGGTAGGCCTGCAAATTTTCAAGAAGGTCAT10.9900990099009901No Hit
AAAGCAGGGGAAGCAACAAGAGGGAGAGGGAGAAGCAGGCTCCCCGCTGA10.9900990099009901No Hit
GAGTATTGGAGTAACAGTGATAAAGAACAACATGATAAACAATGACCTTG10.9900990099009901No Hit
ACCTTAGATTGGGTTTGATCCCACAGCTTCTTTAACTCAAATGATCTTCT10.9900990099009901No Hit
GCCGTAGACATATGCAAGGCAGCAATAGGGTTGAGGATTAGCTCATCTTT10.9900990099009901No Hit
GACCTGCAACGGCCCAGATGGCTCTTCAATTGTTCATCAAAGACTACAGA10.9900990099009901No Hit
TTTCTGAACCACTCGGGTTGATTTCTGGTGATATATGTAATCATCGCCAG10.9900990099009901No Hit
ATTCCAGAGAGGAATGAACAAGGACAAACCCTCTGGAGCAAAACAAACGA10.9900990099009901No Hit
ATTCTACACTGTAGAGACCCATTAGAGCACATCCAGAAACTGATTGCCCC10.9900990099009901No Hit
GATTAGAGGTTTCGTATACTTTGTTGAAACTTTAGCTAGGAGCATTTGCG10.9900990099009901No Hit
GAGCCTAACATAGTCAAACCACATGAGAAAGGCATAAATCCCAATTACCT10.9900990099009901No Hit
GTCATCAATGATGTGGGAGATCAATGGCCCTGAGTCAGTGCTAGTCAACA10.9900990099009901No Hit
GGCAAGAACACAGTATTTTTCCCATTTGGGTGGCGCCAGTCTCGGGGCCG10.9900990099009901No Hit
GGCCGGGACTCAGGCACTCCTTCCGTAGAAGGCCCTCTTTTCTAAGGGGA10.9900990099009901No Hit
GCAGTGTCAGCAGACCCATTAGCATCTCTCTTGGAAATGTGCCACAGCAC10.9900990099009901No Hit
CTCTGTATATTTTCAGAGACTCGAACCGTGTTACCATTCCATTCAAGTCC10.9900990099009901No Hit
TCCCAGGTGTTGCGATAGCCCTTCTTTTTAACTTGCCTCTCTCTGCATCT10.9900990099009901No Hit
AGGAAGGAGTTGAACCAAGATGAATTAAGCAAAACCCAGGGATCATTAAT10.9900990099009901No Hit
AGGACAAACCCTCTGGAGCAAAACAAACGATGCTGGATCAGACCGAGTGA10.9900990099009901No Hit
GAGTACGGATGGTGGACATCCTTAGACAGAATCCAACTGAGGAACAAGCC10.9900990099009901No Hit
GAGCAGCAGTGTCAGCAGCCCCATTAGCATCTCTCTTGGAAATGTGCCAC10.9900990099009901No Hit
TTCTTGATCCGTCCAGACTCGAAGTCGACCCTGGCATCAATCCGGGCCCT10.9900990099009901No Hit
GGTGCTAGCAGCGCTACAGGACATTGAAAATGATGAGAAGATCCCAAGGA10.9900990099009901No Hit
CCCTAGGGTATATAAAACTTATTTCGAAAAGGTCGAAAGGTTGAAACATG10.9900990099009901No Hit
TATGTATCCTATCTGATATTCCAGATTCTGGTTGAAAGACACCCACGGTC10.9900990099009901No Hit
ATAGTAAGCGGGAGAGACGAGCAGTCAATTGCTGAGGCAATAATTGTGGC10.9900990099009901No Hit
GCCTTATGCTCCAGAGCCTGAAAACTTTCAAAGTACAGTTTGATCAAACA10.9900990099009901No Hit
CGATCAATAAGCGCCCCATCCTCCATCCTTCCTCGAAGCAGGTACAGGCA10.9900990099009901No Hit
GTAAGAAGAGCAGCAGTGTCAGCAGACCCATTAGCATCTCTCTTGGAAAT10.9900990099009901No Hit
ACTCCAGACACTCCAAAGCTGGGTAGCTCCATGCTAAAATTAGCCACAAA10.9900990099009901No Hit
TTGTATAAGTTTGGTCCTCCATCTGATACTAATAGCCCTACCTTTGATTG10.9900990099009901No Hit
GCTGATCTGAGCCCACGGAAGCCCATTGAGGCAGCCTCTTCCCTTACTGC10.9900990099009901No Hit
CACCGGAATGGATCCCAGAATGTGCTCTCTAATGCAAGGTTCAACACTTC10.9900990099009901No Hit
ATTATCTGGGTTCTAGTTGGTATCTCTTTCACTTCTCTTTTCTTCATGGG10.9900990099009901No Hit
AGAGTCAATTGGTGTGGATGGCATGCCACTCTGCTGCATTTGAAGATTTA10.9900990099009901No Hit
CCCATCTCCCTGCCCTCCAGTCTCTCCAGTCCTGGTGGTCATGGCCACAG10.9900990099009901No Hit
TTCCTCAACTGTCATACTCCTCTGCATTGTCTCCGAAGAAATAAGACCCT10.9900990099009901No Hit
AAAAATAAGAGTACATGAAGGGTATGAAGAATTCACAATGGTTGGGAGAA10.9900990099009901No Hit
ATATAAATAAGACAGGGACATTTGAATTCACAAGCTTTTTTTATCGCTAT10.9900990099009901No Hit
GCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATC10.9900990099009901No Hit
GGTCAAGAAGGGAGAATGAACTATTACTGGACACTAGTAGAGCCGGGAGA10.9900990099009901No Hit
AAACAAGGGTAGATAAACTAACTCAAGGTCGCCAGACTTATGATTGGACA10.9900990099009901No Hit
GTTATTGCCAGCTGTGACTCTGATGTCAGTATTCTTGCCCCCACTTCATT10.9900990099009901No Hit
GGCACGATCGGGTTCGTTGCCTATTCGTCCGAGCGCTCGAAGACTCCCCG10.9900990099009901No Hit
GCCTAACAGCTAATGAGTCAGGAAGGCTAATAGATTTCTTAAAGGATGTA10.9900990099009901No Hit
GGAGTTAGCTAGCACCACATGGTATGACTCTAAGCGGGTGAGGATAATGG10.9900990099009901No Hit
AGACTTATGATTGGACATTAAACAGAAATCAACCGGCAGCAACTGCATTG10.9900990099009901No Hit
ACTCTCCGATTGGCCATGTTTCCGATTTGTTTTCAAAGAATTCCTTGGTC10.9900990099009901No Hit
GCCTAACATAGTCAAACCACATGAGAAAGGCATAAATCCCAATTACCTCA10.9900990099009901No Hit
AAACTCCCGCTATATCCTGACCACTCATTTATTCCTACGATATCTTGCTT10.9900990099009901No Hit
GCATGGCACCTATAATGTTCTCAAACAAAATGGCAAGCCTAGGGAAAGGG10.9900990099009901No Hit
GTCGGCAAGCTTGCGCATAGTTCCTGTAATCTCCAAGTTTTCTTAAATTG10.9900990099009901No Hit
CCACATGAGAAAGGCATAAATCCCAATTACCTCATGGCTTGGAAGCAGGT10.9900990099009901No Hit
GTTCCTATATGTGAGAACCAATGGAACCTCCAAGATCAAGATGAAATGGG10.9900990099009901No Hit
ATATAGGACTTCTTTTTGCTCATGTTGATTCCCACTAACTTGCAGGTCCT10.9900990099009901No Hit
GAGGGATAAGAGTCAGCAAAATGGGAGTAGATGAATACTCCAGCACGGAG10.9900990099009901No Hit
CTTGAGGACTGCGATAGGCCAAGTGTCGAGGCCCATGTTCCTATATGTGA10.9900990099009901No Hit
GTACCTACTTCGCGCTACCTTTCTGACATGACCCTCGAGGAAATGTCACG10.9900990099009901No Hit
ATCTCAGAGAACTCTTCTTTCTTGATCCGTCCAGACTCGAAGTCGACCCT10.9900990099009901No Hit
CTTTATGACTGACAAAGGGATTCAGGGGATTACAAAGTCTTCCCCGATAA10.9900990099009901No Hit
CTCTTGATAGTGTCTGTTATTATGCCGTTGTACTTTAACACAGCCACTGC10.9900990099009901No Hit
TCTTAAGCCCTCTTAAAAGACTTAGAGCTTTTAGATTAGACTTACTTGAT10.9900990099009901No Hit
TTTTTGGACAGTATGGATAGCAAATAGTAGCATTGCCACAACTACTTCAG10.9900990099009901No Hit
CACCAGAACAGAGTAGGATGCAATTTTCCTCATTGACTGTGAATGTGAGA10.9900990099009901No Hit
GAACAATAGCAATGGAGTTAATCAGAATGATCAAACGTGGAATCAATGAC10.9900990099009901No Hit
CTACTGGGAGCCCAGACTGTTCAAGCTTTTCGCAAATGCTCCTAGCTAAA10.9900990099009901No Hit
GGCTACAGCACAGCACAAGATAGGAGCCTTCTACTATTGCTACAGTATTA10.9900990099009901No Hit
AATGAAAACCCAGCTCACAAGAGTCAAGTGGTGTGGATGGCATGCCACTC10.9900990099009901No Hit
AGGTCCTGCACACTTTCCCAATAGAGCCTTCCTCCACTCCCCTGGGTGAC10.9900990099009901No Hit
ATCCACACCAATTGACTCTTGTGAGCTGGGTTTTCATTTGGTCTCATCAG10.9900990099009901No Hit
AGGGTATTGGAGTCCATGGTTTCCACATTATCATTTGAAGCAATCTGGCC10.9900990099009901No Hit
ATGTAATGGAATCAATGAACAAAGAGGAAATAGCGATAACCACCCACTTT10.9900990099009901No Hit
GCGCAAAATGCCATAAGCACCACATTCCCTTATACTGCAGATCCTCCATA10.9900990099009901No Hit
TTCTAACAGGAGTCAGAAATTGGTTTTTCCATATTTCTGATTGCCAAGTG10.9900990099009901No Hit
CTCTAGCTCTATGTTGACAAAATGACCATCGTCAACATCCACAGCACTCT10.9900990099009901No Hit
AGCTTGAACAGTCTGGGCTCCCAGTAGGGGGCAATGAAAAGAAGGCCAAA10.9900990099009901No Hit
GTGGACGACAAACACAGAGACTGGTGCACCCCAGCTCAACCCGATTGATG10.9900990099009901No Hit
GAGCCACACAAATGGGAAAAATACTGTGTTCTTGAAATAGGAGACATGCT10.9900990099009901No Hit
GCCATCAGCGGTCAAAGTTCCTGCTGATGGATGCTCTGAAATTAAGTATT10.9900990099009901No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers