FastQCFastQC Report
Sat 26 Sep 2020
HNCVFBGXG_n01_FD_S4_R2_A04.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCVFBGXG_n01_FD_S4_R2_A04.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences142
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCCAGGTTCCAGGTTGTCCCTAAGTGCCTGAACAATGAGAAGCAATTT10.7042253521126761No Hit
GAATCAATAATTGTAGAATCTGGTGACCCGAATGCACTATTGAAGCACCG10.7042253521126761No Hit
TACTCAGAAAAGGGAAAGTGGACGACAAACACAGAGACTGGTGCACCCCA10.7042253521126761No Hit
ACCGCTCTCTCCGTGCTGGAGTATTGCTCTACTCCCCTTTTGCGGCCGAG10.7042253521126761No Hit
CACGTGGCACACACTAGACCAAAAGCAGCTTCTGTGGTCACTGTTCCCAT10.7042253521126761No Hit
ATAAAATTAAAAAGGGTGAGATTAATAAAACTTAGAGATCAAATGTCGCA10.7042253521126761No Hit
GCTAATGAGTCAGGAAGGCTAATAGATTTCTTAAAGGATGTAATGGAATC10.7042253521126761No Hit
AAGTACTTCAGGTCAATGCTTGCTAGCATTTCTGCTGGTATTTGTGTTCG10.7042253521126761No Hit
ATGCTGGATCAGACCGAGTGATGGTATCACCTCTGGCCGTAACATGGTGG10.7042253521126761No Hit
CTACTACCACCAATCCACTAATCAGGCATGAAAACAGAATGGTGCTGGCT10.7042253521126761No Hit
GGTCTAATATATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTTATG10.7042253521126761No Hit
TCTCCCACATCATTGATGACGAATAAGTTATTGTCAACTTCTCAGTTCCT10.7042253521126761No Hit
ACAAATGCCAGCAGAAATGCTAGCAAGCATTGACCTGAAGTACTTCAATG10.7042253521126761No Hit
TAAGGACACTGTTCCAGCAAATGCGGGATGTGCTTGGGACATTTGACACT10.7042253521126761No Hit
GAATAAGAGAGGCTATCTAATAAGAGCACTGACATTAAATACGATGACCA10.7042253521126761No Hit
GCCCTGTCCACTTCAGAAATCAAGTTAAAATAAGGAGGAGAGTTGATACA10.7042253521126761No Hit
CATTCCCTTATACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGA10.7042253521126761No Hit
ACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGA10.7042253521126761No Hit
GACTGAATAAGAGAGGCTATCTAATAAGAGCACTGACATTAAATACGATG10.7042253521126761No Hit
CTACAGGACCTGCAAGTTAGTGGGAATCAACATGAGCAAAAAGAAGTCCT10.7042253521126761No Hit
CCCTTATACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGATACA10.7042253521126761No Hit
GTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGTCCCCGTGC10.7042253521126761No Hit
ATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCC10.7042253521126761No Hit
TTTAACGTCAGTGCTCTTATTAGATAGCCTCTCTTATTCAGTCTTTGTTT10.7042253521126761No Hit
CCTCTGCATTGTCTCCGAAGAAATAAGACCCTTCATTACTCATGTCAAAG10.7042253521126761No Hit
GTGCAATATCCTCAAAGGAAAATTTCAAACAGCTGCCCAGAGGGCAATGA10.7042253521126761No Hit
GGCTATTAGTATCAGATGGAGGACCAAACTTATACAATATACGGAATCTT10.7042253521126761No Hit
GACAATATACTGGTGGGATGGGCTCCAATCATCCGACGATTTTGCTCTCA10.7042253521126761No Hit
AACCCAGGGATCATTAATCAGGCACTCCTCGATTGCTTCATATAGCCCCC10.7042253521126761No Hit
GTTGAATACAGATTTTGCCAGTAAGGTCCTGCACACTTTCCCAATAGAGC10.7042253521126761No Hit
TTCTTGACTGATGATCCGCTTGTCCTTTTGAAAGTGAACCCACCAAAACT10.7042253521126761No Hit
TCTAATAAGAGCACTGACATTAAATACGATGACCAAAGATGCAGAGAGAG10.7042253521126761No Hit
ATCAAAGGTAGGGCTATTAGTATCAGATGGAGGACCAAACTTATACAATA10.7042253521126761No Hit
ATATAGCACCAGAAAAAGTAGACTTTGATGACTGCAAAGATGTTGGAGAC10.7042253521126761No Hit
CATATAGACTGTTGAATACAGATTTTGCCAGTAAGGTCCTGCACACTTTC10.7042253521126761No Hit
TGTAGAATCTGTCCACTCCTGCTTGTATTCCCTCATGGTTTGGTGCATTC10.7042253521126761No Hit
CTTTTCGTCCGAGAGCTCGAAGACTCCCCGCCCCTGGAAGGACAAATCTT10.7042253521126761No Hit
CAGTAAACAGAACACACCAATACTCAGAAAAGGGAAAGTGGACGACAAAC10.7042253521126761No Hit
CCAAAGTTTGATTATCGCTGCTAGAAACATAGTAAGAAGAGCAGCAGTGT10.7042253521126761No Hit
CATCTACTCCCATTTTGCTGACTCTTATCCCTCTCAGCGACATCTCCGTG10.7042253521126761No Hit
CCCGATATGGGTATCTGTAGTCTTTGATGAACAATTGAAGAGCCCTCTGG10.7042253521126761No Hit
TCCACGCCCTAATGATAAGACAGGCAGTTGTGGTCCAGTATCGTCTAATG10.7042253521126761No Hit
ATCATATTCCATGCTTTTGGCTGGACCATGGGCTGGCATTACCACAGCAT10.7042253521126761No Hit
ACTCAAGGTCGCCAGACTTATGATTGGACATTAAACAGAAATCAACCGGC10.7042253521126761No Hit
ATTTAAAGATGAGTCTTCTAACCGAGGTCGAAACGTACGTTCTTTCTATC10.7042253521126761No Hit
CATTAAACAGAAATCAACCGGCAGCAACTGCATTGGCCAACACCATAGAA10.7042253521126761No Hit
CCATAGGGGAGACACACAAATTCAGACGAGAAGATCATTTGAGTTAAAGA10.7042253521126761No Hit
CTATTTCCTCTTTGTTCATTGATTCCATTACATCCTTTAAGAAATCTATT10.7042253521126761No Hit
CTTCAGTGTAATCTTTAACCGATTAGAGACCTAGATACTACTAAGCGCTT10.7042253521126761No Hit
GGCCTTTAAAGTGTTAAGTAAAATGACGAAATGTTTGTTATATGTGAAAA10.7042253521126761No Hit
CATTGATTCCATTACATCCTTTAAGAAATCTATTAGCCTTCCTGACTCAT10.7042253521126761No Hit
CATATGCATCTGCATTCTGATAGAGACTTTGTTGGTCAGCACTAGTAGAT10.7042253521126761No Hit
GTATATGAGGCCCATGCAACTGGCAAGTGCACCAGTTGAATAGCTTAGTG10.7042253521126761No Hit
AAGCAGGAGTGGACAGATTCTACAGGACCTGCAAGTTAGTGGGAATCAAC10.7042253521126761No Hit
TCAACCTTTCGACCTTTTCGAAATAAGTTTTATATACCTTAGGGTAATGA10.7042253521126761No Hit
ACCGCAAGCGATTTGCAGACAATGGAATTTTTCATCCCCAATTCCTTGAA10.7042253521126761No Hit
GTGAGCGAGGACTGCAGCGTAGACGCTTTGTCCAAAATGCCCTAAATGGG10.7042253521126761No Hit
GAATATGGGGAAGATCCGAAAATCGAAACTAACAAGTTTGCTGCAATATG10.7042253521126761No Hit
CTTCTGTTCGCATGTCGGATGGCCGTCCTTCATTGTTCACGCTGAATGCT10.7042253521126761No Hit
CAGAGCATCTGTCGGAAGAATGATTGGTGGAATCGGGAGATTCTACATCC10.7042253521126761No Hit
GGCTGCATATCCTGACCCCTGCTCATTTTGATGGTGATAACCGTACCATC10.7042253521126761No Hit
GTGCCTCCTTGGCACTGAGATCTGCATGGCCAGGGTTTGTATCAACTCTC10.7042253521126761No Hit
GGTCATGTCTTTCTCTTTGACAGAAGACTCGGCCTCAATCATGCTCTCAA10.7042253521126761No Hit
GCATTAAGCAAAACCCAGGGATCATTAATCAGGCACTCCTCGATTGCTTC10.7042253521126761No Hit
CTTCTAACCGAGGTCGAAACGTACGTTCTTTCTATCATCCCGTCAGGCCC10.7042253521126761No Hit
CAGAAATGCTAGCAAGCATTGACCTGAAGTACTTCAATGAATCAACAAAG10.7042253521126761No Hit
TCCTGTAGCTCTGCTAGCACCTGCTTCCAAGCCATGAGGTAATTGGGATT10.7042253521126761No Hit
GAGGGAAGTCCACATATATTACCTAGAGAAAGCCAACAAAATAAAATCTG10.7042253521126761No Hit
GGGTTTGTATAAACTCTCCTCCTTATTTTAAATTGATTTCTGAAGTGGAC10.7042253521126761No Hit
AACTCAAGGTCGCCAGACTTATGATTGGACATTAAACAGAAATCAACCGG10.7042253521126761No Hit
GTAAGGTCCTGCACACTTTCCCAATAGAGCCTTCCTCCACTCCCCTGGGT10.7042253521126761No Hit
CCTTATTTTATCTTGATTTCTGAAGTGGACAGGGCCGAAGGTACCATGTT10.7042253521126761No Hit
TCGATACTGAATCTTGGACAAAAGAAATACACCAAGACAATATACTGGTG10.7042253521126761No Hit
TCCTCGATCGGCTCCGCCGAGATCAAAAGTCCTTAAAAGGAAGAGGCAGC10.7042253521126761No Hit
TGCGCATAGTTCCTGTAATCTCAAATTTTTCTTCAATTGTCTCTTCGCCT10.7042253521126761No Hit
TCCTCCTGGAGTGTACATCTGCTCCCAGCACGACCCTTGGGTTAAGTGCA10.7042253521126761No Hit
GAATAGGTCAGGCTGCAAAACTTCAGCCACTCAGCTTCTCCTTAAAGAAG10.7042253521126761No Hit
CTCCCGCTTACTATCAACTGGATCAATCTCCTGGTTGCCTTTCTGAGAAT10.7042253521126761No Hit
CCCACTGCAGGGCTACTGAATACATAATGAAGGGAGTGTACATAAATACG10.7042253521126761No Hit
TGTCAATCCGACTCTACTTTTCCTAAAAATTCCAGCGCAAAATGCCATAA10.7042253521126761No Hit
GTATACGAAACCTCTAATCTGCATCCCAGGTGTTTCGATAGCCATTCTTT10.7042253521126761No Hit
AGTAAGAAGAGCAGCAGTGTCAGCAGACCCATTAGCATCTCTCTTGGAAA10.7042253521126761No Hit
ACATAATGGACTCCAACACCATGTCAAGCTTTCAGGTAGACTGTTTCCTT10.7042253521126761No Hit
GAATAGAACGATTCCTCTTGGGAATCCAGGAATGTGTAGTTGCAACGGCA10.7042253521126761No Hit
CTCCCTTCATTATGTATTCAGTAGCCCTGCAGTGGGACACTTCTGCTGTA10.7042253521126761No Hit
TCATCACAGTTTCTCCAAGCGAATCTCTGTATATTTTCAGAGACTCGAAC10.7042253521126761No Hit
AAACAAGGGTGTTTTTTATCATTAAATAAGCTGAAACGAGAAAGCTCTTA10.7042253521126761No Hit
ATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACT10.7042253521126761No Hit
AAGGAATCCCATAGACTCCTACTGGCCATTTCTTGTCTTATAGTGAAAAG10.7042253521126761No Hit
AGTAGAAACAAGGCATTTTTTCATGAAGGACAAGTTAAATTCATTATTTT10.7042253521126761No Hit
GATGGTGGCGTACATGCTAGAAAGAGAATTGGTCCGTAAAACAAGGTTTC10.7042253521126761No Hit
CAATGGAAGTTGTTCAACAAACAAGGGTAGATAAACTAACTCAAGGTCTC10.7042253521126761No Hit
CAATAATTGCGGCCATGGTATTCTCACAGGAGGATTGCATGATCAAGGCA10.7042253521126761No Hit
GAGATACCCAATTACAGCAGACAAGAGAATAATGGACATGATTCCAGAGA10.7042253521126761No Hit
ACTATGTTCTTTTCCATGATCGCCTGGTCCAATCGCACGCAAAGAGGGCC10.7042253521126761No Hit
TGTAGGACCAAAGAAGGAAGACGGAAAACAAACCTGTATGGGTTCATTAT10.7042253521126761No Hit
GTAGAAACAAGGTCGTTTTTAAACAATTCGACACTAATTGATGGCCATCC10.7042253521126761No Hit
GGATACAACAAGGCAACCAAACGACTTACAGTTCTTGGAAAGGATGCAGG10.7042253521126761No Hit
GAGCCGCCCTGGGTGACTCTCCGATTGGCCATGTTTCCGATTTGTTTTCA10.7042253521126761No Hit
AAACAAGGTCGTTTTTAAACAATTCGACACTAATTGATGGCCATCCGAAT10.7042253521126761No Hit
GGGGAGTCACTGGTGGGGATAGCCCCATTCAAATTACTCCAAAACAGCCA10.7042253521126761No Hit
CTGTAGAATCTGTCCACTCCTGCTTGTATTCCCTCATGGTTTGGTGCATT10.7042253521126761No Hit
CTCCAGCACGGAGAGAGTGGTAGTGAGTATTGACCGATGTATAAGGGTTA10.7042253521126761No Hit
GTATATAAAACTTATTTCGAAAAGGTCGAAAGGTTGAAACATGGTACCTT10.7042253521126761No Hit
CAGATTGGAGGAGTAAGGATGGTGGCCCTCCTTAGACAGAATCCAACTGA10.7042253521126761No Hit
GTACACTCCCTTCATTATGTATTCAGTAGCCCTGCAGTGGGACACTTCTG10.7042253521126761No Hit
CTGTTCCATAGCCTTTGCCGTAGTGCTAGCCAGCACCATTCTGTTTTCAT10.7042253521126761No Hit
GGCTAATAGATTTCTTAAAGGATGTAATGGAATCAATGAACAAAGAGGAA10.7042253521126761No Hit
TCGGAATACTGCCCGACATGACCCCAAGCACGGAGATGTCGCTGAGAGGG10.7042253521126761No Hit
CAGATGGCTACTACCACCAATCCACTAATCAGGCATGAAAACAGAATGGT10.7042253521126761No Hit
CACCAATACTCAGAAAAGGGAAAGTGGACGACAAACACAGAGACTGGTGC10.7042253521126761No Hit
GCCCAAAATGAGAAATCCTCTCAGGACAGCAGACTCCACCCCAGATGTGC10.7042253521126761No Hit
ACCTGGGGATAATGAACCAAGTGGGTATGCACAAACAGACTGTGTTCTAG10.7042253521126761No Hit
GTTAAAAAGAAGGGCTATCGCAACACCTGGGATGCAGATTAGAGGTGTCG10.7042253521126761No Hit
GTGATGAGCCAGAGCCCAGATCTCTAGCAAGCTGGGTCCAAAATGAATTC10.7042253521126761No Hit
CCAGCCATCTGTTCCATAGCCTTTGCCGTAGTGCTAGCCAGCACCATTCT10.7042253521126761No Hit
AATGGGAGTAGATGAATACGCCAGCACGCAGCGCGGGGTAGAGAGTATTG10.7042253521126761No Hit
GTCAATGAGGAAAATTGCATCCTACTCTGTTCTGGTGGGGCAGCAGCAAA10.7042253521126761No Hit
TACCATTATATGATGCAATCAAATGCATGAAGACATTCTTTGGCTGGAAA10.7042253521126761No Hit
ATTTCAAGAACACAGTATTTTTCCCTTTTGTGTGGCTCCAGTCTCGGGTC10.7042253521126761No Hit
ACGTTCCATGGGGCCAAGGAGGTGTCACTAAGCTATTCAACTGGTGCACT10.7042253521126761No Hit
GTATGGAGTTCTCACTCACTGACCCGAGACTGGAGCCACACAAATGGGAA10.7042253521126761No Hit
CTATTGTTATGCTATTCTGGATTAGTCGTCCCTCATAATCACTGAGTTTG10.7042253521126761No Hit
GGAGTAAGGATGGTGGACATCCTTAGACAGAATCCAACAGAGGAACAAGC10.7042253521126761No Hit
TTACATATATCACCAGAAATCAACCCGAGTGGTTCAGAAACATCCTGAGC10.7042253521126761No Hit
CTCTTATTCAGTCTTTGTTTTTTCTTCCCTATTGTTCTTTGCGTGACCAT10.7042253521126761No Hit
CATTGAAGTACTTCAGGTCAATGCTTGCTAGCATTTCTGCTGGTATTTGT10.7042253521126761No Hit
GGCTCCACCATGGCCACAGTAACCAGAACCCCCCAATCCTCAGAAAAGGG10.7042253521126761No Hit
GTTGTAAGGCTTGCATAAATGTTATTTGTTCGAAACTATTCTCTGTCGCT10.7042253521126761No Hit
ATCTATTTCTTCTCTGTTTAATTTTGCTTCCTCTGAGTATTTTGGGTAGT10.7042253521126761No Hit
ACTTATTTCGAAAAGGTCGAAAGGTTGAAACATGGTACCTTCGGCCCTGT10.7042253521126761No Hit
GGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGA10.7042253521126761No Hit
ATATGATGCAATCAAATGCATGAAGACATTCTTTGGCTGGAAAGAGCCTA10.7042253521126761No Hit
CAGTAGCCCTGCAGTGGGACACTTCTGCTGTAAAATAGTTCCTCCTCATG10.7042253521126761No Hit
ACACTGTCCAAATAATAAAACTTCTCCCCTTTGCTGCTGCCCCACCAGAA10.7042253521126761No Hit
ATACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGATACACCATG10.7042253521126761No Hit
AGCCTAACATAGTCAAACAAAATGAGAAAGGCATAAATCCCAAGTACATC10.7042253521126761No Hit
CTCTGGAGCAAAACAAACGATATTGACTGTGAATGTGAGAGGATCAGGGT10.7042253521126761No Hit
GGCAATAATTGTGGCCATGGTATTCTCACAGGAGGATTGCATGATCAAGG10.7042253521126761No Hit
GGAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAA10.7042253521126761No Hit
GTCCCGCACTCGCGAGATACTCACTAAGACCACTGTGGACCATATGGCCA10.7042253521126761No Hit
CTTTTGGTCGCTGTCTGGCTGTCAGTAAGTATGCTAGAGTCCCGTTTTCG10.7042253521126761No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers