FastQCFastQC Report
Fri 2 Oct 2020
HNCVFBGXG_n01_FD_S4_R1_G11.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCVFBGXG_n01_FD_S4_R1_G11.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences118
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATA43.389830508474576No Hit
GAGAAGAACCCCGCACTCAGAATGAAGTGGATGATGGCAATGAGATACCC21.694915254237288No Hit
ATCAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAAT21.694915254237288No Hit
ATTGATGGCCATCCGAATTCTTTTGGTCGCTGTCTGGCTGTCAGTAAGTA21.694915254237288No Hit
GTAGAAACAAGGTCGTTTTTAAACAATTCGACACTAATTGATGGCCATCC21.694915254237288No Hit
GCTTAATGCTGGGCCTCTTGTCTTCTTTGCCCAAAATGAGAAATCCTCTC21.694915254237288No Hit
GTTGTGGAGACGCATATAGACTGTTGAATACAGATTTTGCCAGTAAGGTC10.847457627118644No Hit
TTACCAACACTACGTCCCCTTGCCCAATTAGCACATTAGCCTTCTCTCCT10.847457627118644No Hit
ATGGAAGACTTTGTGCGACAATGCTTCAATCCAATGATCGTCGAGCTTGC10.847457627118644No Hit
ATCTGAGGGGGCGTGGTGTCGTCCTCAAGAATGGTTCAATTTTGGCGTTC10.847457627118644No Hit
GATTGGAGGAGTAAGGATGGTGGACATCCTTAGACAGAATCCAACTGAGG10.847457627118644No Hit
CAATAAGGCATGTGAATTGACTGATTCAAGCTGGATAGAACTTGATGAAA10.847457627118644No Hit
CCACAAGAGGGGTCCAGATTGCTTCAAATGAGAATGTGGAAACCATGGAC10.847457627118644No Hit
TAATGTCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTGGAC10.847457627118644No Hit
GAGAATAATGGACATGATTCCAGAGACAACAAGGCAACCAAACGACTTAC10.847457627118644No Hit
GCCACAACTACTTCAGTGCATGTGTGAGGAAGGAGTTGAACCAAGATGCA10.847457627118644No Hit
AGAATAAGGCAACCAAACGACTTACAGTTCTTGGAAAGGATGCAGGTGCA10.847457627118644No Hit
TGTTTACAGAATCAATCTCTTTATGACTGACAAAGGGATTCAGGGGATTA10.847457627118644No Hit
TTCATTTACTCCAGACACTCCAAAGCTGGGTAGCTCCATGCTAAAATTAG10.847457627118644No Hit
CCCTTATACTGGAGATCCTCCATACAGCCATGGAACAGGAACAGGATACA10.847457627118644No Hit
ATTCAATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCC10.847457627118644No Hit
CGCGAGATACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAA10.847457627118644No Hit
GTTGAAACTTTAGCTAGGAGCATTTGCGAAAAGCTTGAACAGTCTGGGCT10.847457627118644No Hit
GGCAATGAGATACCCAATTACAGCAGACAAGAGAATAATGGACATGATTC10.847457627118644No Hit
TATTTATATAGGACTTCTTTTTGCTCATGTTGATTCCCACTAACTTGCAG10.847457627118644No Hit
GACAATATACTGGTGGGATGGGCTCCAATCATCCGACGATTTTGCTCTCA10.847457627118644No Hit
GTTGAATACAGATTTTGCCAGTAAGGTCCTGCACACTTTCCCAATAGAGC10.847457627118644No Hit
TAGTGAAGGTCTCCCATTCTCATCACAGTTTCTCCAAGCGAATCTCTGTA10.847457627118644No Hit
ATGCTAGAAATTCCAACCGGTCTCCTATATGAACTGCTAGGGAAAAATTT10.847457627118644No Hit
GTCAGTAAGTATGCTAGAGTCCCGTTTTCGTTTCATTACCAACACTACGT10.847457627118644No Hit
GTCCTATTGGTGAAGTTCCCTCTCCATACAACTCAAGATTTGAGTCAGTC10.847457627118644No Hit
GGATAGGAGACCGGTTGGAATTTCTAGCATGGTGGAGGCCATGGTGTCTA10.847457627118644No Hit
AGTAGAAACAAGGTACTTTTTTGGACAGTATGGATAGCAAATAGTAGCAT10.847457627118644No Hit
GTCCTGCACACTTTCCCAATAGAGCCTTCCTCCACTCCCCTGGGTGACTC10.847457627118644No Hit
GAGTAGGATGCAATTTTCCTCATTGACTGTGAATGTGAGAGGATCAGGGT10.847457627118644No Hit
CAATTACCTCATGGCTTGGAAGCAGGTGCTAGCAGAGCTACAGGACATTG10.847457627118644No Hit
GCCCCTAGACACCATGGCCTCCACCATGCTAGAAATTCCAACCGGTCTCC10.847457627118644No Hit
AGATTGCTCAGTTCATTGATGCTTAATGCTGGGCCTCTTGTCTTCTTTGC10.847457627118644No Hit
CAGGCAAACCATTTGAATGGATGTCAATCCGACTCTACTTTTCCTAAAAA10.847457627118644No Hit
TCACATTGTCGATGGATTCAATTCCCCAGTTCTGGAAAAGCACTTTTGCA10.847457627118644No Hit
GTTCATTGATGCTTAATGCTGGGCCTCTTGTCTTCTTTGCCCAAAATGAG10.847457627118644No Hit
GGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCG10.847457627118644No Hit
CAGGACAGCAGACTCCACCCCAGATGTGCCTTCATCTGGATCTTCAGTCA10.847457627118644No Hit
ATTCGACACTAATTGATGGCCAACCGAATTCTTTTGGTCGCTGTCTGGCT10.847457627118644No Hit
CCACTTGAATGGATGTCAATCCGACTCTACTTTTCCTAAAAATTCCAGCG10.847457627118644No Hit
AATTAGCACATTAGCCTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGA10.847457627118644No Hit
GAACAGGAACAGGATACACCATGGACACAGTAAACAGAACACACCAATAC10.847457627118644No Hit
GTATCAAGGTCTCTAATCGGTTAAAGATTACACTGAAGTTCGCTTTCAGT10.847457627118644No Hit
AAGTGGATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAAT10.847457627118644No Hit
ACTCTGTTCTGGTGGGGCAGCAGCAAAGGGGAGAAGTTTTATTATTTGGA10.847457627118644No Hit
ATTAGCACATTAGCCTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTGAT10.847457627118644No Hit
CAATATATTGTTTCTCCAACTCTTGATAGTGTCTGTTATTATGCCGTTGT10.847457627118644No Hit
GGAGGAGTCTATGGGATTCCTTTCGTCTGTCCGAAAGAGGCGAAGAGACA10.847457627118644No Hit
GCATTAAGCAAAACCCAGGGATCATTAATCAGGCACTCCTCGATTGCTTC10.847457627118644No Hit
CACCACGCCCCCTCAGATTGCCTGATGGGCCTCTTTGCCATCAGCGGTCA10.847457627118644No Hit
GCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAAATGAGAAATC10.847457627118644No Hit
TCGCAGTCCCGCACTCGCGAGATACTCACTAAGACCACTGTGGACCATAT10.847457627118644No Hit
GATCTGGCCTGCGGATGCCTTTTGTTGATTGGTATTTCCTCCACTCCTGG10.847457627118644No Hit
GATGCTTATCTCTTGTCTTCTTTGCCCAAAATGAGAAATCCTCTCAGGAC10.847457627118644No Hit
GCTTATCTCATTGCCATCATCCCCTTCATTCTGAGTGCGGGGTTCTTCTC10.847457627118644No Hit
GTGGAACAGATCTTCATGATCTCAGAGAACTCTTCTTTCTTGATCCGTCC10.847457627118644No Hit
CCCACCGAACTTCCCCAGCCTTGAAAACTTTAGAGCCTATGTAGATGGAT10.847457627118644No Hit
GTGTCCTTACGAATCCACTGTACCGGCTTCTGGTTGCCTTAGGGACAAGA10.847457627118644No Hit
GATGTCAATCCGACTCTACTTTTCCTAAAAATTCCAGCGCAAAATGCCAT10.847457627118644No Hit
GTTCATTGATGCTTAATGCTGGGCCATATCTCTTGTCTTCTTTGCCCAAA10.847457627118644No Hit
ATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACT10.847457627118644No Hit
CCATACAGCCATGGAACAGGAACAGGATACACCATGGACACAGTAAACAG10.847457627118644No Hit
AGCATGTTGAACATGCCCATCATCATCCCAGGACTCAGTGATGCTGTGCC10.847457627118644No Hit
CTTTCCCAATAGAGCCTTCCTCCACTCCCCTGGGTGACTCTCCGATTGGC10.847457627118644No Hit
TAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACTC10.847457627118644No Hit
GGGTAGATAAACTAACTCAAGGTCGCCAGACTTATGATTGGACATTAAAC10.847457627118644No Hit
CATTAGCCTTCTCTCCTTTTGCAAGATTGCTCAGTTCATATCTCTTGTCT10.847457627118644No Hit
GTTTGATCCCACAGCTTCTTTAACTCAAATGATCTTCTCGTCTGAATTTG10.847457627118644No Hit
GATTTGAGATAATTGAAGGAAGAGACCGAATCATGGCCTGGACAGTGGTG10.847457627118644No Hit
GTTAAATTCATTATTTTTGCCGTCTGAGTTCTTCAATGGTGGAACAGATC10.847457627118644No Hit
GTAATCTCGTCAATGGCATTCTGTGTGCTCTTCAGGTCGGCTGCATATCC10.847457627118644No Hit
CTTCAATGGTGGAACAGATCTTCATGATCTCAGAGAACTCTTCTTTCTTG10.847457627118644No Hit
GTGTTTATATTGAAGTGTTGCACTTAACCCAAGGGACGTGCTGGGAGCAG10.847457627118644No Hit
GTTCATTGATGCTTATCTCTTGTCTTCTTTGCCCAAAATGAGAAATCCTC10.847457627118644No Hit
GTGAGGAAGGAGTTGAACCAAGATGCATTAAGCAAAACCCAGGGATCATT10.847457627118644No Hit
CTTCTCATCCTCAAGAATTCCCCTTTGGCTTGTGTTGAGAATAGAACGAT10.847457627118644No Hit
CAATGATATTTGCTGCAATGACGAGAGGATCACTTGAATCGCTGCATCTG10.847457627118644No Hit
CTCTTATTTTCAGTGTTTGGAGGTTGCCAGTTAGCACTTCTTCTTCTTTC10.847457627118644No Hit
GATCTTCATGATCTCAGAGAACTCTTCTTTCTTGATCCGTCCAGACTCGA10.847457627118644No Hit
ACTCTACTTTTCCTAAAAATTCCAGCGCAAAATGCCATAAGCACCACATT10.847457627118644No Hit
CAATAGGGTTGAGGATTAGCTCATCTTTCAGTTTTGGTGGGTTCACTTTC10.847457627118644No Hit
ATGCTGGGCCTCTTGTCTTCTTTGCCCAAAATGAGAAATCCTCTCAGGAC10.847457627118644No Hit
GATGATGGCAATGAGATACCCAATTACAGCAGACAAGAGAATAATGGACA10.847457627118644No Hit
AATATGGAGAGAATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCAC10.847457627118644No Hit
TTTTTGGACAGTATGGATAGCAAATAGTAGCATTGCCACAACTACTTCAG10.847457627118644No Hit
ATAAAAGAACTGAGAGATCTAATGTCGCAGTCCCGCACTCGCGAGATACT10.847457627118644No Hit
CAAAAAGTACACATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGA10.847457627118644No Hit
ATTTAAAGATGAGTCTTCTACCCGAGGTCGAAACGTACGTTCTTTCTATC10.847457627118644No Hit
CAATTAGCACATTAGCCTTCTCTCCTTTTGCAAGATTGCTCAGTTCATTG10.847457627118644No Hit
GTATGGAGTTCTCACTCACTGACCCGAGACTGGAGCCACACAAATGGGAA10.847457627118644No Hit
TCATTAATCAGGCACTCCTCGATTGCTTCATATAGCCCAAGATCGAAGGT10.847457627118644No Hit
GTGAGTACCCTTCCCTTTCAAAGTCATGCCCACTTGCTACTGCAAGCCCA10.847457627118644No Hit
CAGTTCATTGATGCTTAATGCTGGGCCTCTTGTCTTCTTTGCCCAAAATG10.847457627118644No Hit
AAGCACCACATTCCCTTATACTGGAGATCCTCCATACAGCCATGGAACAG10.847457627118644No Hit
GGGGAAAGTGTGCAGGACCTTACTGGCAAAATCTGTATTCAACAGTCTAT10.847457627118644No Hit
CTGTGGACCATATGGCCATAATCAAAAAGTACACATCAGGAAGGCAAGAG10.847457627118644No Hit
GGTCTCCCATTCTCATCACAGTTTCTCCAAGCGAATCTCTGTATATTTTC10.847457627118644No Hit
TACTCACTAAGACCACTGTGGACCATATGGCCATAATCAAAAAGTACACA10.847457627118644No Hit
GGTCTCCTATATGAACTGCTAGGGAAAAATTTCTCGAATAGATTGCAGCA10.847457627118644No Hit
GGAAAGAGCCTAACATAGTCAAACCACATGAGAAAGGCATAAATCCCAAT10.847457627118644No Hit
GTATATGTAACACAACAGGGGTAGAGAAGCCTAAATTTCTTCCTGATTTG10.847457627118644No Hit
GAGATTGATTCTGTAAACAATGCTGTGGTAATGCCAGCCCATGGTCCAGC10.847457627118644No Hit
CATCAGGAAGGCAAGAGAAGAACCCCGCACTCAGAATGAAGTGGATGATG10.847457627118644No Hit
AGCAGGTACTGATCCAAAATGGAAGACTTTGTGCGACAATGCTTCAATCC10.847457627118644No Hit
GTCCCGCACTCGCGAGATACTCACTAAGACCACTGTGGACCATATGGCCA10.847457627118644No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers