FastQCFastQC Report
Tue 23 Aug 2022
HNCMMDSX3_n02_chi_077.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCMMDSX3_n02_chi_077.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences109
Sequences flagged as poor quality0
Sequence length151
%GC67

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2119.26605504587156No Hit
GGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG21.834862385321101No Hit
ACTTACGAGTGAAAGATAACTTAGAACCCAAGAAAAAGAAATTAAATTAC10.9174311926605505No Hit
GGGGTGGGGCGGGGGGCGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGG10.9174311926605505No Hit
GCCCCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGCCCAACACA10.9174311926605505No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGCGGGGG10.9174311926605505No Hit
GGTGGGGGGGGGGGGGGCGGGGTCCTGCGGGCCAGGGGGGCGGCCGAGCG10.9174311926605505No Hit
TATAAAAGACAACCTAATGTAAAACCTTGTAAATCCTTTGATCCAATTAT10.9174311926605505No Hit
TCTACGATTTGTATGTGATCGGACGATCAGATTTGGTGAGATCATGCAAA10.9174311926605505No Hit
GTCGGGGGCGGGGGGGGTGGGGGGGGCTGGCGGGGGGGGGGGGTAGGGCC10.9174311926605505No Hit
ATTCGAAGGTGAGCNTTAAAAGGTAATAAGTGTTGTATAGTTCTAANAAC10.9174311926605505No Hit
AGTCATATTTGACTCCAAAACACTAACCAACCTTCTTCTAGCTTCTCAAA10.9174311926605505No Hit
GGGGGGGGGGGGGGGGGGGCGGGGGGGGGGCGGGGGCGGGGGGGTGGTGG10.9174311926605505No Hit
GGTTACCCCAGTTGTTTAAGCCATATTAAAATATTCGATATGTGGTAAGG10.9174311926605505No Hit
ATACTAATCTCATCTTAAACACTACTTTCGTTTGCGTCCCGATCTTGTAT10.9174311926605505No Hit
GGGGGGGGAGGCGGGGGCGGGGGGCGGGGGGGGGGGACGGGGGGTGGCCT10.9174311926605505No Hit
AAACTGTTGGGACCTCATCTAGACAAGGCCGTAATAATTGAATCAAGGGC10.9174311926605505No Hit
GTGTCCGTACGATTAAACAATGCTAGATAACCCAGGACATCAGACAACCA10.9174311926605505No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGG10.9174311926605505No Hit
GGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.9174311926605505No Hit
GAGGGGGGGGGGGGGGTGGCGGGGGGGGGGGGGTGGGGGGGGGGGGAGGG10.9174311926605505No Hit
CTGTTGGTGCCACGAGGGAAAAGGGCTATTCAGCTATATAGGGGGGTGGG10.9174311926605505No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.9174311926605505No Hit
CCAATAGCCTATATGTAAGTAGTTGCAGTTAAAAAGCTCGTAGTTGAACC10.9174311926605505No Hit
GGTGCGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGTGGGGGGGGGG10.9174311926605505No Hit
GCGTGGGGGTGGGTTGGGGTGCGGGGGGGGGGGGGGGGGGGGCGGGGGGG10.9174311926605505No Hit
TACTGAATCAGATAACATCCCAATAAGCAGCACGAAACCCACAAACACTC10.9174311926605505No Hit
GTGTTCGTATGCTCCAAGCTCGCGCATCGAACTACCTACCACCTATCCTT10.9174311926605505No Hit
AAGTAACTGCAGATCTTGGTGTCTATAGGATGGAACCCCGCTCACCACAT10.9174311926605505No Hit
GTGTTTGGAAACGAATATTACTTGATGTCATGTGTATGATTGAGTATGAG10.9174311926605505No Hit
GCTGGGAGGGGTGCGTGGGGGGGGGGGGGGGGGGGGGGGGGCGCGGGGGG10.9174311926605505No Hit
GGCTTGGGCCGTTCGGGGGGTGGTGTGGGGGGGGGTTTTGTGGGTTCTGT10.9174311926605505No Hit
GACCTGGGGGTAGATCACTCAAAGGGGGCAGGGGGTGTCGGGCTTCGTAG10.9174311926605505No Hit
CCAGGACGCAGAGATGTTCAACATCAGGATCCGCACCTACTCAGACTGAG10.9174311926605505No Hit
ACCTTCTTCTTGCTTCTCAAAGCTTTCATGGTGTAGCCAACGTCCATATG10.9174311926605505No Hit
GTAGGGCGGGGGCGCGGGCCGTGGCCGGGGGGGCCGGGCCCGCGGCGCCC10.9174311926605505No Hit
AGGAACAACAGCTTCAAACGGCTGCAAATACACCGAAGGATGATGATCAA10.9174311926605505No Hit
TATATCTATCTATAAATAATGGAATTTATGCGTTAAGTTTAATCATTCTC10.9174311926605505No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGGGG10.9174311926605505No Hit
GCTTAAAACTGTGGAATTAAAATCAAACACTCAAACCGTGTTTACTCCCA10.9174311926605505No Hit
TTCACATCCAGCCCGAGTCCGTACGCAGTCCATACCAAAAAAACGCAGGT10.9174311926605505No Hit
GTCTTCATATCACCAAGTGTATGACTTTTCAACAACTACCTTGTGGTTCA10.9174311926605505No Hit
AACGACAATACCCAGATATCAGTTGAAAAACAGTGTTTCCTGGAAGTTAT10.9174311926605505No Hit
ATGTTCCTAAACCAGCAAAAAACTACTAAATAAAAGACATGAAAGACTAA10.9174311926605505No Hit
ATATTAGATTGTGGGAAAAAAATAAAAATCTTTTTAAAAGTTTTACATTC10.9174311926605505No Hit
ATAAATAGCATTTAACATAAATAGTGTAGATTTGATAGTGTCCACATTTA10.9174311926605505No Hit
AGCGTAGTGGCGGCGTGATACCTCTGCAAAGTTCTTGGGAAGGAGACATC10.9174311926605505No Hit
ACCTTATGGTGCGTGGCGATCGGCTGTGATTTTCTCGGGTAATGTNGCTA10.9174311926605505No Hit
CAACTACCCTCTTGATACCTTGTGAGCATGATTGAATAGTTTATACCTGG10.9174311926605505No Hit
CAAACCAACAGAGAACACCGGTTGAGTGTACCAAAAATTCTTCGATATTT10.9174311926605505No Hit
AAAAAAAGGTGCCGATTATAATGACTAATAGCAACCAAATCCTCACACAT10.9174311926605505No Hit
AAAAAAGTCATAATGACAATCTAAATCATTAAAAAAGAAAAAGTTGACCT10.9174311926605505No Hit
GATACCTTCCANTAAAATAGGTTTGACTCCAACAATGCCTAATCTATGGA10.9174311926605505No Hit
GGGGGGAGGGGGGGGTGGCGGTGATTGGTTCGTCGGTGGGGGGGGGGGGC10.9174311926605505No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.9174311926605505No Hit
AAAAAAGGCACATTTACAAAATATAACTTTAACAGGAAATCTAACCCGCA10.9174311926605505No Hit
GGATCATTGGTTGACGAACAAGTGCTAATGGCTCGTCGGTCCGTAGGATG10.9174311926605505No Hit
GGCTATAACACGTTTGGATGACCGGGCATTTGGGTACAGCACTCTAAGGC10.9174311926605505No Hit
AGTAAATAGCTATTTAATGACAAAATATCTAACGTGAGATGTATGGGCAC10.9174311926605505No Hit
GGGGGGGGGGGGGGGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.9174311926605505No Hit
GGTGGGGTGGGGCTTGGGGGGGGGGCGGTGGGGAGGGTGGTGGGTGGGGT10.9174311926605505No Hit
TATATGTGTCCTCGTATTTACGACCTAATACTTTGGTCATTTTCTCTAAC10.9174311926605505No Hit
TCGTGTACTGGTAGGTCTCGGTAGCGTTACGCGGGGGGGTTCCCTGTTGC10.9174311926605505No Hit
GGCGGGCGGCGGGGCGGGGCGGGTGGGGGGGGGGGGGGGGTGGGGGGGGG10.9174311926605505No Hit
ATATTAGACACCAAAATCAACTTCCTGATTGACAGGTGAGAGTGTAAAAA10.9174311926605505No Hit
GTTGCGGACGGGGGGACTGGGGGGCGGTGGGGCCGCCGCCCGGGGGGGGG10.9174311926605505No Hit
GGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.9174311926605505No Hit
ATATATATCTATGTCTGTCAACCAAGCACGCAGAGTAATTGATCAAATCC10.9174311926605505No Hit
AACAAGTGAAATAATATTAATTGTATCATTAAACTAACAAGTAACAACTA10.9174311926605505No Hit
AAGTAAAAGTGTTCTTGTTGCTGTAGAACACAAACAGAACAAACAAAAAA10.9174311926605505No Hit
CCGTGGTGTGTGTCAATGGTGGGAGGAGGCTGGGGCTGTAGCTGAGCATC10.9174311926605505No Hit
AGTCAAAGGTGGACAAGCCTCCGTGACAACGGTCGGGGGTATCGTAGTTG10.9174311926605505No Hit
GACGCCACGGCCCCGAAAGCCCACGGGCTCCTCCGCAAGGTGCGTCCACG10.9174311926605505No Hit
CTAATATGCAACTATAAAAAAAATAAATATCTATTAAAACTACAAACTTA10.9174311926605505No Hit
GATCAAGCGGGGAATAACGTCTTCGTTCGTAGTTGATAAGCTTCTGGAGG10.9174311926605505No Hit
GGGCTATATTAGTCGCCCGTTAGCGCCTACGAGGGCGTCTCGGCGGGATA10.9174311926605505No Hit
GGGGGGGGGGTGGGCGGGTGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGG10.9174311926605505No Hit
TGGCAGAGGGGCGGCTGCGGTCCGGCGGGGGGGCGGCGGGGGGCAGGCCT10.9174311926605505No Hit
GGGGGGGTGGTCGAGGGGGGGGTCTGGCGGGGGGGTGGGCGTGGGGGCGG10.9174311926605505No Hit
CGCAATATTAAATTACATCACCACATTTGAGTATATAACAGTGTATGACT10.9174311926605505No Hit
GGTCGTTAGTCCTCAGGGTTCCGCGGATGTGAGGGGATGTGTTGTGGCAC10.9174311926605505No Hit
AACAAAAAACAATAATCAACGAGCTTACGAAACCCATTCAAAAAATATGT10.9174311926605505No Hit
GGGGGGGGGGCGGGGGGCAGGGGGGTGGGGGGGGGGGGGGGGGGGGCGCG10.9174311926605505No Hit
GGGATGTCGCGCAGCGTGGTCGCGCGGTTGTGTTGGGGACCAAAGGGCAC10.9174311926605505No Hit
CACTAATAATTTGAAATCTTAAAGGTATCATCGAAAGGAGATGCTGGGAA10.9174311926605505No Hit
CAATTAAATTATTATTTAAATTTATTTTCAAAAAATCAATTTTTATATAA10.9174311926605505No Hit
CTTTTGGGTTCTTTTGTTTTTTACTTTCTCTTTTCATTTACGTATTGAAA10.9174311926605505No Hit
AATATGAGCATATCGGCGATTACTAGCTCCTATTATTCGAATACACATCA10.9174311926605505No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)