FastQCFastQC Report
Tue 23 Aug 2022
HNCMMDSX3_n02_chi_064.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCMMDSX3_n02_chi_064.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATACTCAATAATACACATGACATCAAGTCATATTCGACTCCAAAACACTA11.36986301369863No Hit
TAGTAAGCCCGTGCATCACCAAGAGACAGCTTTAAGAGTCCAAGTTAAGG11.36986301369863No Hit
CAAAACATTGCATCATATCCAATGATTTTCGAAAGTTATTCGGCAACATT11.36986301369863No Hit
CACCATTCTTCNTGTAGTTCCATCCTAATAAATCTGGGAAAGACTTCAAA11.36986301369863No Hit
GGGTAGCAAAACCAACTCATTTATTTGATTAATCAAAACAAAGTTTTTAG11.36986301369863No Hit
TTGTAGAACGCTTGAAGAGGAGAAGAGAAAAGGAAGAGAAAGGGAAGAGA11.36986301369863No Hit
TCTCAAAGATTCATTATAGAGGTTGGTTTCTCTTTGGACATGAATAATTA11.36986301369863No Hit
ATAAAATGTGAAAGTAAATGATTAAGAAACATGCTCCCACAACGAAATAA11.36986301369863No Hit
ATTAAATACTATTCGAAATTCAGAAGAACTGCGTGAAGGAGCTATTCAAC11.36986301369863No Hit
GGGCTGGTGTTCTTCACCAAAGTAAACTTCAGGTGATAGAGTACCTACAG11.36986301369863No Hit
AACGACCTCTGTGCCAGGCAGGAACCACGCTCAAAGCTTCTATAAACAAT11.36986301369863No Hit
ATCATAATCAGCTATATATGTAAACAATAGAACGCCACTAACATAATAAA11.36986301369863No Hit
GTGAAAATGGGGGGGTGCGTTGCTGTGAGGTTGGGGCGGTGTAACTGGTT11.36986301369863No Hit
TTTTCTTAGGTTTCTAATTTTTTTTTTTCCCTGGAAAGATTATGTTTATT11.36986301369863No Hit
ACCATAGGGACACATTTATTTCTGATTTCGATCGGTTAAACAAAGTTGCA11.36986301369863No Hit
ATTGATTAGTGATTATGCTGCAACATGGATGCATGCAGCATGCCTGTCCA11.36986301369863No Hit
GTCTTCGTGTTCTCTTAGAGAACGTGTTTTGTCGTCAAGTTGTTCTGTTA11.36986301369863No Hit
CATAATATGGCCATCTTGGAGACTGACCAACCATCACCTTTTCTTCAATC11.36986301369863No Hit
CACATTACACATATGAGTAAATCTAATATCATTAGCCGGAAGATATGCGC11.36986301369863No Hit
CCATTACTTCATCAAGACCATAAATACGAGCGATGCCATCGCCCACTTGA11.36986301369863No Hit
AATTAGGAGTATATACAAATTATTGTTTAATGACAGGTCTGCATGTGCAG11.36986301369863No Hit
ATCATACACATGACATCAAGTCATATTCGACTCCAAAACACTAACCAAGC11.36986301369863No Hit
AGTCTGCCCCGACGCTCGCCCGGCACGCTCGCCCGGTTGGGTCGGTTGGA11.36986301369863No Hit
ATGGTAGCCCAGGTGTTTAAAACGTGGAACAGCTACGAGACTTCATCGAC11.36986301369863No Hit
CTGTATGATTGAGTATAACATCTTAAACAACAAACCGATCTTGTAAGCCT11.36986301369863No Hit
GATCAATNATANACAATTAGCCAAGTTCAGTTTTCATTAATTAGATTTAT11.36986301369863No Hit
GCAATCAATCGCATGCATCTATAAATATGAATAGTCAGGCATAGTAAGGG11.36986301369863No Hit
ATTCAAAAATTGAATGTCCGAATTAGAAACGCTTTAAACCTGGACAAACC11.36986301369863No Hit
ATCTATATGATGGTAATTATCTACAGAAAGATTTTGCCTAGCGTCATTGG11.36986301369863No Hit
AGATCAAGTCATATTCGACTCCAAAACACTAACCAACCTTCTTCTTGCTT11.36986301369863No Hit
ATTTACTTGTTATAACTTCAGCAATCGGATGATTAACAAGACTGTGTTCT11.36986301369863No Hit
GTATATAAAGAGAAAGTTAGCGATGTAAGATGAGATCTTACTAATGAAAA11.36986301369863No Hit
ATCTACATTGAATGCATATCAAAACACACCTTTAATCTTAACAACAAAAC11.36986301369863No Hit
GGACTATGGCCGTTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTG11.36986301369863No Hit
TATGAGTCTTTGGCTTTGTGTCTTCTAACAAGGAAACACTACTTAGGCTT11.36986301369863No Hit
ATATATAGGAGGAGAGAGGAAGAGATAGTGGGCAAAACCATAGATTGGGT11.36986301369863No Hit
AGTTATTCTGAAGATAACACCATATTCAGATAAAGAAAACAATAATCCTA11.36986301369863No Hit
CATGAGATCAAGTCATATTCGACTACAAAACACTAACCAACCTTCTTCTT11.36986301369863No Hit
GTAATACATGCNGCAAAATGACTCAACTAGTCAAGAAACCATTGAGATTC11.36986301369863No Hit
ATATGAAGCGGTTTCGGGTCAACAGATAAATTTTTCAAAATCTTCAATTC11.36986301369863No Hit
GGGGTAGTGTTGCGGCTTGGTAGTGCAGGGAGCTTGATCCAGTAGTTGAA11.36986301369863No Hit
AGTCATAACTATCTTGATTTTTAAGCGAATTTTTTATGAAGTTTTTAGTT11.36986301369863No Hit
GTCAAAATAGAGAGACTAGAAAGACGATTTATCAAATAAGCTTGTAGTAT11.36986301369863No Hit
GAGGNTTGGTGGGTGTTGGGGTGGGGGGNGTGCGGGGGCGGGGGCTGCGG11.36986301369863No Hit
ATGTTCTGCGCGGGCGGGGGCTGGTTGAACACGGGTCATGGGCGGGAGGG11.36986301369863No Hit
CTATATATTATACAATTAATATCTTAACCTCTCTATATATATATGGCATT11.36986301369863No Hit
AAACAAATAATACTCAGAATAATATACAAAACAAAATTTAGCAGACTTTT11.36986301369863No Hit
CGGGCACGCGGGTTCGGCGAGGGGGCGCGGCAGAGGGGGGCGTTGGAACG11.36986301369863No Hit
GTTATTGGCAGGAATTGATTGAAACTTTAGCGTGGGCTCATGAACGCACA11.36986301369863No Hit
CCTTCATAGCGGGTGGGACCCACGGCGAATGGTTCATCAAGTCTTCAAAA11.36986301369863No Hit
GCGTTTCGGCGGGCAACGAAATTCAGTCTCCCGCCCACGAGATGTTTTTT11.36986301369863No Hit
GCTTCAAGCAACGCGCGCGTAGTACTGTGATGGGGGTGGTCGGCCGGAGG11.36986301369863No Hit
ATATACCACAAACCTAATAACATTAAAATATACCAAGAGTTAACTAATCG11.36986301369863No Hit
TAATACAAATAAACTATACAGAAAAAAAAGAAAAATACAACAAAAATCTA11.36986301369863No Hit
ATAGTATAGAAAATATTTCTGAAATAACTGTACCATCCTCTCCACCACTG11.36986301369863No Hit
GATTATAATTAAACTGAATAATAAATTACAAAAAAAAGTAAATATACATA11.36986301369863No Hit
GGATTAAAGTGATGGCCTTTTGCTGCTCTGTATCGCAGAGCTGAGCGTTC11.36986301369863No Hit
GTCTCTCATCTTCTTTTCGCAGATGACAGCATGTTCTACTGTAGGGAGAC11.36986301369863No Hit
GGGGGCGGGCTGTGAGGCTAGTGGGGGGCGCGGGAGTGCGAGTCCTTATC11.36986301369863No Hit
GATATGGTATGCTAAAAGTGAATATTTTAGAAAAGAAATGAATAATAATA11.36986301369863No Hit
CAGTTAGAGGGAGAACAAAATCGCTCACCTTCTCCAGATCTTTCAGATTA11.36986301369863No Hit
GGTTCAAGCCCATGTTTAGGAGAAAAACTTAGATAAATGGCGAGAGAAGA11.36986301369863No Hit
GAATTTAAATGTGAAGAGATATATAAATTTAATTTTAAACCAAAAAAAGT11.36986301369863No Hit
TTTCTATCCATATGCCATTTTTCAAAGAATTTTTTTAGGCAAAGACTCCG11.36986301369863No Hit
ATGATCGTCGTCGTCTTCAAACTCGCCTAACCCCGCCCAATTCATCGTCA11.36986301369863No Hit
GTGGTGTATTAGGAGGGTCTACTCGTGGTTTTTTAACTTGTTGATGCAGT11.36986301369863No Hit
ATAAGGAGGGAATGGCGATATTTCGCGGTCGGGCAGCATGGAATAGATAA11.36986301369863No Hit
CCATTCTCCAATACTAATCCGATATAAACACGACCATAATCTCCTTTAAC11.36986301369863No Hit
ACTTAAGCTTTTCAGATCGGGTTGCGGTTTAAGTTATTATACTCCTGTCT11.36986301369863No Hit
GTGTTTTGGAGTGGAATATGACTTGATGTCATGTGTATGATGGAGTATAA11.36986301369863No Hit
GCTAACCATTTAAGTGTTTCTTCATGTCTGTTTGAATCAAGAGGTATCTA11.36986301369863No Hit
CCATATGAGTCTTTGGCTTTGTGTCTTCTAACCAGGAAACACTACTTAGG11.36986301369863No Hit
CGGCTCTTGGGATTCTAGTCATCACCGATGTTGTTAACATCTGTCTCCAA11.36986301369863No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)