FastQCFastQC Report
Tue 23 Aug 2022
HNCMMDSX3_n02_chi_059.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCMMDSX3_n02_chi_059.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125
Sequences flagged as poor quality0
Sequence length151
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTTATACCTAATCATACACATGAGATCTAGTCATATTCGACTCCAAAAC21.6No Hit
TAGCAACAGTGAATACTTTCTGACTGTCATCTTGATCCAGAATATTATCT21.6No Hit
ATATAATATTAATCTGATTAATAACTAGTAATTTTTTTTATTTCTGTTTA21.6No Hit
GGGGTCAACAGGTCAAGTTTTACTACAATTACTTGAAATGCGTTTGGATA21.6No Hit
CCTTCTTCTTTTGCAGTCCATCTACATACATTAGGATGCATACCAGTACA21.6No Hit
GTCTTTTTACTCTCTTGCACAATTGTAATATATTTAATTACATGTAGATA21.6No Hit
CTACAACCAACNTGATATGGTCTTCGGTTTTGAAATCTTTCACGTGATTT10.8No Hit
CTCTCCTTTCTCTGTTTCTCTCTTTTTAGCCAAGGACTCTGTTTTTGACT10.8No Hit
CGTGTATATAATGAGCAAATTTCACTCTTGCTCGTTGTTCGTTCTGTAGA10.8No Hit
GATGTATATATGTGATGTGATGGTAAGACCGTACCTGAGGATGAAGATGG10.8No Hit
CCTAGGACTTTGAAAGCCGCCGGAATCGCCATAATTCCAGCTCCGACGAT10.8No Hit
ATATTTATATAGAGTGATGATGAATACTGATGAATACGTGAGGACTAGTT10.8No Hit
GGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAAGCGACGCA10.8No Hit
GTTCTTATTTATGCCCATTCTAAGAATTGAGCAAATTCTGATTCCATTGT10.8No Hit
CCTTTTTCAAACTCAGTCCAACCTAGACGAGAAAGCAGCCATCATTGAGA10.8No Hit
GATTTGAGAAGTAAGAAGAAGGTTGGTTAGTGTTTTGGAGTCGAATATGA10.8No Hit
GTTGCTGATTTTACTCATTAATTGCTTCATCTGGATGTTGTTGTTTCTGC10.8No Hit
CATAATATATCTCTCTCTTCCTCTCTCTCTCAAGCATCAATTAATTCTCA10.8No Hit
TAAAATAACAATAACATACAATATGCAACACACTGGTCAATGTAGATAAA10.8No Hit
TTCCAAGTGAGATGTCCAAGATCAAAGGAACGAGGGTAAGAATCGACGAG10.8No Hit
CTATAATAATTAGCATTACTCCGATTTCACACATAGATTTCTGGTCTGAT10.8No Hit
ATCTCGTTCAAATTCATTAAAATTTCATGTACTGATTCTTGAATACCTGC10.8No Hit
CTACTACAGAACTGAACGTGAGAGTTTCTTCTCATCCAGCTCCTCGCGAA10.8No Hit
AAATAAAAAAGCATCACATAGTTATTTTAAAAAGGCCAAACACACCTTTA10.8No Hit
CATACACAAAGTTTTCTTTGGTCTTTAATAATTTAGAACATTTTTTATTG10.8No Hit
ATGTAAGTTGACTACAAGAAAACATCACGAATTTACAAAATTTCATGTTT10.8No Hit
ATTTTAAAACGTTGCACGATCGTCGCAATTTAGTCACAAAACAGTTACAC10.8No Hit
AAACAAAATATTGGCTCTTCTACCAAACACAGTTCAAAAGCAAAAAGGTA10.8No Hit
CACTTGTAGCATACCATATCTCAATAGATTGGCGTAATTTTTCTACCGCA10.8No Hit
CCTAATAGGCTGAGGTGATTTTGAGTTTTATGGGGTAAAAAATATTAACG10.8No Hit
CTTTTTTTTCTCTCTTCAGAATTGGTTTCATATAACGATCTGTGTGATAC10.8No Hit
TTTACTTTGCTTTTTGGTTTTCATTCTTTTGACGTTCAACCGGAGTTTGT10.8No Hit
GTCAGGATGATNTGGGAATCTACTAACGAGCTTGAACGGAGATTTTGCAG10.8No Hit
GCGGAGGGTAAGTTTTTTTTTGTTTTTGCCTCTTTCAATTCTCTTCAATT10.8No Hit
CATAATGAATGTCAAAACAAAAAAAAAAAAGTCCATACCATAACAAAAGT10.8No Hit
GTCAAGGATGAGGAACGTGGCTTGCTACATTAGTCACAGCAAAGAACCAA10.8No Hit
GTGAAGAACTTTAGGGTATGTGAAGCATGAGATGGTGTGCACCACCATTA10.8No Hit
AAATAGCACAACCCAATTAACTACATGTTTTGGTCATATTTTATTCACAG10.8No Hit
GGGGGGAGATCTTATAGTGGACCCTATCCCAATTTTTCTTTTGCTAGGCC10.8No Hit
GATTTAGATAGNGATTCGATTAGAAGTTCTTCCTTTTTATCTGTGAATTG10.8No Hit
CTGTACCTGTTTGAACAGCGTCAGTCAATCCTGTAGTTTTTTGCGCAGAG10.8No Hit
TTAGGAACCTTTCCAGTCTATATCTCATATGGTGTCTTATCAACTAATTT10.8No Hit
ATATTCTGATACGCACAAATTCCACCAATTATATATGCTTTATTCCTTTG10.8No Hit
CATAAACTATTCAAAGCCTCAACTTTTGATATTTCCGTTTCCTAAAAAGT10.8No Hit
ACTTAGGCTTTTAAGATCGGGTTGCGGTTTAAACTGTTATACTCAATCAT10.8No Hit
AGATTATATAGAAAATAGAGTGAAAAACCCATCACCCTTGTAGTTAGTTA10.8No Hit
GTGTATGATTGAGTATAAGAACTTAAACCGCAACAATATCCTAAAAGCCT10.8No Hit
ATTTTATGGATTTCCCTGAAATCAATAAAAAAGTTCCTCGATGGTCATAC10.8No Hit
GTGGTGGATCTTTAAGACATTTGAGATCCATGTTGATGTTGCATATCAAA10.8No Hit
CTTCTCTCTTAGACCCCTCCAAAGGTTCCTGGAGCACATTGTCCTCAGCT10.8No Hit
GTCTTTGGCTTNGTGTCTTCTAACAAGGAAACACTACTTAGGCTTATAAG10.8No Hit
CAATGACAAACATGCATAGGAAGATCATCAAAAATCAGATATTAACAAGA10.8No Hit
CCACTACTATATGTATCATAACATGTTAGATTTCTGTTTTCATTGCTGCA10.8No Hit
TCATTAAGCAATTGAAATTTTGATGGTCCTTATTTGATGACTAAGAAAGT10.8No Hit
GGTTACATTCAAATGATACTCTCAGGTACTAAAACGTCAACATCATAAAA10.8No Hit
ATGATAATGATGTTGATCTGAGATTGGCTCGTTTGGAAGAACTGATGAAC10.8No Hit
GGCTAAGGNTTTTAGTCGACGTCGATTGATCATTTTTATATTTTTAACGT10.8No Hit
ATGAAGAGGTTNCTATAAAGAAGATAGCAAACGCGTTTGACAACAGAGTT10.8No Hit
CTGTTGTAAAATGATGACTCAAAACCTCACGAAATCACAACTCTCGTTTG10.8No Hit
ATAGAATAGTATTGTCTGATTCATGCGGATAATAGAAAGTTCTTGTATTA10.8No Hit
CTACTTAGGCTTATAAGATGCGGTTGCGGTTTAAGTTCTTATACTCAATC10.8No Hit
GTGGAGGTGTATGCTAGAAAATAAATGGACAACAGAAAAAGACTAAAACA10.8No Hit
AAATTGCTTCTTCTTCTGAGAAAGTTTTGAGACAAGCTTGGCGATAAGAA10.8No Hit
GTTGGGTGATGAGGATGAGTTGTTGATTAAGTTGGAGGTATCGGACATCT10.8No Hit
ACTATACTGATAGTAACACATATAGTCAAAACACAAAAGGTGAAGATTGT10.8No Hit
CATATAAGGTATGTCACCAACCAGCAAATGCACCGATTAGAGCGTTCTCC10.8No Hit
TTTCAGCCCCTTCTCTATTATATTAGTAAAGGGAAGGGGACTCTATCAGG10.8No Hit
GAGTTGTCTTACTTAAGAATGTGTTGTGCGGTTTCCAAAATAGAAAGTTT10.8No Hit
GAACTTAGCCGATACAAAGCTATATGATAGCACCCAATTTTTCCGATTCG10.8No Hit
ATTCTAAACTTACGTTTCGCTCCCTCTCTAAGTCCCTCTCGCTCTTTGGT10.8No Hit
TAGAAATGGAGAGTAAATTGAAGAAATGACCTTAAATCTTTGTGTACTGA10.8No Hit
GTATTATGATCATATTTAGAATAAGCTTTTAAGTGGTTATAGGCATAGAA10.8No Hit
GGATCATAGGAGAAAAAAGAGTGAATATAGTAGCACGGTTTTATTTCCGT10.8No Hit
GGTCTCTCTCTCTCTCACGTTAAGAACACGATTGATTTGTGAGGCATTGC10.8No Hit
CTATAGGTATTGCCCTTAATTTAGAATCCAATAATGTTGGTGTTGTATTA10.8No Hit
GATACATACTTAAATTTAGATAGAAAAAAAACTCTTCAATAAAAAAAAGA10.8No Hit
ATGTCGAACAACAACAATTATTAACATGTGTATAGTTTGGCAAAAAATGA10.8No Hit
CACACACACACACAAATCTGAAATCTCTCTCGTCCGCCAAAGGTCGAGTT10.8No Hit
GGTTACGGTGACGAAGTTAGTGAGATTGCATATAAGATGATGAATTCTGT10.8No Hit
CCATTTCGTATGTGAAATCAAATTGTTCTAGGTATTGGCTTTACGCTGCG10.8No Hit
TTTACACAGGGATGGATCCATAGCGACATTAGCATTGTAGATTACTAACT10.8No Hit
TGATATTCACAAAATGAATGGTCACGCCACCAAGGATTGCAAAGCTCTGG10.8No Hit
ATGGAACTCTTNGGATGGTGTGAATTTTTGTTGTTCCCCAAAAGTAAATT10.8No Hit
ATCTTAAAATTACTTACAATTTTCCTACTTCACTAGAAGCCTTTACATCT10.8No Hit
GTGGATGGCAGGCAGGCCTATATTTCTTGGTTTCAATAGGACTCCTTACG10.8No Hit
GTTGTGGCTTTGGTTCTCTTTGTCGTGTTTGGATTGTTGAATTCGCTTTT10.8No Hit
AAACTATACAACGTGGCTACGTATCAATCTATGCTTAGCAAAGTCAACCA10.8No Hit
GTGATGGAGAAGAGCAATGTAGAGGAATCATCTTCTTCTGGAAATGCTGA10.8No Hit
TTTTCTCATTTTGTTCATACTTGATAAATATTGAGCAAATCTGTCACACT10.8No Hit
GGCTTCTCTGCTTCTGCTTTAACTGGTTCAGGTGATGCTGGTTTCTCTTC10.8No Hit
CCTCTTCCCGGCCCATCACAAGGGAAACGAAAACCAAGATGTGCTTTATC10.8No Hit
AATATGACTTGATGTCATATGTATTATTGAGTATAAGAACTTAAACCGCA10.8No Hit
GTAGTGTTTCCTTGTTAGAAGACACAAATCCAAAGACTCATATGGACTTT10.8No Hit
AAATTAGATTTTCCTAATTGCTCAAGAGAAATCAAAAAAATTATCAAAAT10.8No Hit
CTATATTACGGACCCAAAATTACTTTTTCAAGCATTGTTTTCGAATATTT10.8No Hit
GAATTCCTTACGGGGGAAGACCAAGTTCTTTCTTTAATCTTCCCAAGAAG10.8No Hit
GACTAAATTTGTGTTTTTTTTTTAATACGTCGCTGTTTTTATCCCCTCAT10.8No Hit
GTCAATATCTTAACCGGAACTGTCTTGAAATGGTTTACCANAACCAAAGC10.8No Hit
GTGCCACATCTATTCTGAAGTTCTCGACAGACAAAAAGACTTGGATTATC10.8No Hit
AAATAAGGGTGTAAAGTGGGACACTTGGGCCAAACCGGACCGAACCGAAC10.8No Hit
GTAATTCCTTGAGGCTTAATGTTTCCATCTTCAACTTCTTTGGACTTATT10.8No Hit
GTAGGGATTAATTACGAGAAAGGACCTAAAAAAAAAAAAATTTACACAAT10.8No Hit
TCTTTTCACTCTCATTTCTTCAAGCCGGATTGTAAGGGATTGAAGATAAG10.8No Hit
ATATTATATTGATATCACCAAGTTCATTTGATATTTTGGATTCTTGCAGC10.8No Hit
GTCCACAAGGCGTGCGTTGAATTCATGACCTGAATCAACACATTCTAGTG10.8No Hit
ATGCATATCTCACTATTTTTAAGAGGATGTTGGTAGTTTNAGCAACATTT10.8No Hit
CCCATGAAATGATGATATGTTTTATGTCAAGTGCCATTAGAAAAGAAATA10.8No Hit
ATTATGAATAGCTACATGTCACCATCTGTTTAAAGTAAGATCCAATGTTC10.8No Hit
GCTTTCGAAGTGTTGCAACCGAATGCTGCATCGAGTTTAGCTTCCTGTCT10.8No Hit
GTTTAACTATCTATTTCATCATAATAAACTTGATTTTAATTTTATACACT10.8No Hit
GCCAAAGTCCATATGAGTCTTTGGCTTTGTGTCTTCTAACAAGGAAACAC10.8No Hit
AAATAAAATAACAGATGGTCCAAAAAACAAGCATATGGGTAATAAATTAG10.8No Hit
GCATCAAGGACGGCTGTTCGTATGCGGCTCATTCGAAATGTGCAACACAA10.8No Hit
CTACTAAGGTTTCTAGATTTGCGGGTTACATGAGGACTGTGTTCGAGTTG10.8No Hit
GTTAAAGCCTATGCAAAGCATGAGCCGTGATAAATGCATTTTTGTATGTT10.8No Hit
CAGACGAGGGAACCCTAGGAGAGCCGCCGACTCCAACTACCGTCCATGTA10.8No Hit
TGGGCAAACAGGCCAATCATCGTTTTTTAGTGTTTCCCAGTACTCTGGAA10.8No Hit
CGACGTAAGAGTGTATATTTCCAAAGAAGATGATGATGCATTCCCAAGAA10.8No Hit
ATGTAACAGGTAGACTACATACTTGGGTCAAACCCCAAGAAAATGAGCTA10.8No Hit

[FAIL]Adapter Content

Adapter graph