FastQCFastQC Report
Tue 23 Aug 2022
HNCMMDSX3_n02_chi_057.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCMMDSX3_n02_chi_057.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences83
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAACGCTCGTTGCTTAATGAGGGAAGAGCGAGTTCGAAGCTCATCGGAT11.2048192771084338No Hit
GGGTTCAAAGCTGGTGTTAAAGAGTATAAATTGACTTACTATACTCCTGA11.2048192771084338No Hit
CACCATGAAAGCTTTGAGAAGCAAGAAGAAGGTTGGTTAGTGTTTTGGAG11.2048192771084338No Hit
TATTTTAGTTAATGGTCGTATAGTTGATATACCAAGTTATCGCTNCAAAC11.2048192771084338No Hit
ATTTTTTGCCGGCATCTTGGCCTGGGCCTGGGGAGGATCGGAGCTGCGGA11.2048192771084338No Hit
GCATATCCGGTTATGCGTCCCATTTATTCATCCCTTTAGCAACCCCCCTT11.2048192771084338No Hit
GGTTATCTCAATTCGGACCAAAGCTTCTGCAGACGCTCTCAATAGTTCAT11.2048192771084338No Hit
CTTCNTTTAGGGAAGCTTGTTTCCAAGCNGCAAGATGTTCAACGCTCACA11.2048192771084338No Hit
GTCGTAATACGAAGCTGTTGAGGCGCATGTTTTCGGGCCGGGGGGGGCGC11.2048192771084338No Hit
GTAGTTAATTTACTAAATTACCCATGTAAAAATTTATTTAGTTAATTTTA11.2048192771084338No Hit
CGGTCGCGCTTGGCGGGAAGGGTTACCGTGGGTGTGTGTGCTGCGTGGGC11.2048192771084338No Hit
GATTTCAGACAGGTGCTTCTAGTAATTAATGGTGCAGGGAGAGCTGAAAT11.2048192771084338No Hit
CCATTAAGTCCAGGATCCGTTATAGAACTAATACCTATAATTATAAAACC11.2048192771084338No Hit
GCGGTAAAGACTCCAGTAAACATCTATCGGACGATTCTCTTCAAGATACC11.2048192771084338No Hit
GCTGTTTGTGAAGGGCGAGTATACGACCGGGGTCATTCACGACGACTGTC11.2048192771084338No Hit
GTGGCTATGCGCCGGGAGGCGCAGCTTGTCAGGCGATGCCGTCCGCACCA11.2048192771084338No Hit
AGGCCATTCCGAAATGGTTTACGTTGTGAAAGTAATATCGTGCCTTATTT11.2048192771084338No Hit
TAATTATAGAGATGAGTTTGGGCTCTGTTCCTCGTTTTTGTTTCTGGTGT11.2048192771084338No Hit
CGCTCTGGGGTTGTGTTCTTTGTTGGTCGTGCATGTTTACTTCATGTTAT11.2048192771084338No Hit
ACTTTATTTCCCCTATGCGGGAGAAATAACATTAATGAACCAGCAGATAT11.2048192771084338No Hit
TCTATAGTTGTTGCTATATTTTGAACTTTAATCCAGATTTTATAAAATGG11.2048192771084338No Hit
TCACAAACAGTGTTTCGTAGTATAACAATGACTCGGTTGGCATTAGTAGC11.2048192771084338No Hit
GGTGCCCCCAAGGATGCTGTGCCTGCCGCATCTGAGCACGCTGAAGCTGG11.2048192771084338No Hit
GGTTTCTCTTGGCTATATGGTTCATCCGGGGTAGAGATTGAGCTTCAAGA11.2048192771084338No Hit
CGTTGTCGTTGCGGTGCAATGGCAATCTCTATAGGGGCCGAGTGAGGGCC11.2048192771084338No Hit
ATTTTGACGTTTTTGGCCTATATGTACTAAATATTTTATAGTAAATTCAT11.2048192771084338No Hit
ACAAAAGTCCAATATATAGTTAACATTTAACATTTGATATATACATATCT11.2048192771084338No Hit
GATGATGTTTGNTCTCTTGANATTGNCCCTTTTGGTTTCACTATTAAGGA11.2048192771084338No Hit
GGGCAGGNGGGTTGGGTGGGCGTTGCGGCGGCGGGGGGGGGGGGGGGGTG11.2048192771084338No Hit
CTGGGGGTCTAGGTGGGGGGTGGGTGTGTTGCACCCTGGGGCGGTGCGGG11.2048192771084338No Hit
GGGGGGCGGGGGGCGGGGGGGGGGGGTGGGGGGGGCGGGGGGGGGGGGGG11.2048192771084338No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGTGCG11.2048192771084338No Hit
ATATTTGTACTCACGTCAGTAAACCCTTGCGGGGCTCTCGCTGGGGGTTC11.2048192771084338No Hit
TTCCTATTCCGCCTAAAATTCGTGGAATTCGTTGAGAGTTAGAATAGATT11.2048192771084338No Hit
GGATCACGCAAGTGTGCCGTTGGGTCCCCGCGATGCTGCTGGTGCTGGGG11.2048192771084338No Hit
ATATCCTTGTTAAAAGACACAAAGCCNAAGACTCATATGGACTTTGCCTA11.2048192771084338No Hit
ACAATATAGGTGCAGCACTACCCACACCGGTAAGCGATGGCCTACCCTCT11.2048192771084338No Hit
GCAAAAAAGTTAAGATCCACCAAAATAACCTATCATATCAATCATCAATG11.2048192771084338No Hit
GCCCTCAGCCATATCCTTCCGTATCGGGTGGCGTTTGTCTCATGGGGGTC11.2048192771084338No Hit
TCTTCTTGCTTCTCAAAGCTTTCATGGTGTAGCCAAAGTCCATATGAGTC11.2048192771084338No Hit
GGGTGGGGTGGGGGGGTGGGTGGTGCGGGGTGGGGGGGGGTGGGGGGGGG11.2048192771084338No Hit
TGGGTGGGTGAGGCGCGGGTGGGTGTGTGGGTGGAGGCCGGGGTGGGGCG11.2048192771084338No Hit
AGGTAACAAAAATCGATTCGGAAAAAATAAAACAAAGGAAAATAATTAAA11.2048192771084338No Hit
GGCGGGGGGTGGGTGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGG11.2048192771084338No Hit
AGTTGCGTTTGGTGGCGGTGTCGCGTAGCATTCTGGGGGGGGGTGGGTGT11.2048192771084338No Hit
GGTTTTGCAATCTCAGGGATGGACTCTGTTTGAGATACTAAGATATGCTC11.2048192771084338No Hit
ATAATAGTCGAATCTTTCATATTCAAACAGATTTGCATACCAACATCTAG11.2048192771084338No Hit
TGGGTCTGACATCTCTGCGGTGGGTGTGTGGGCAGGGGTCGGAGGGGGGT11.2048192771084338No Hit
GTATCCGCGTTGTTGGGTAGATTGGCTTCTGCTGTGGGTGTTGAACCGAG11.2048192771084338No Hit
AGCGTGGGGGTGGCGGGGAGGGGGGGGCGGGGGGCGCGCGGGGGCGTGGG11.2048192771084338No Hit
TCATGGTGTAGCCAAAGTCCATATGAGTCTTTGGCTTTGTATCTTCTAAC11.2048192771084338No Hit
CCGGGGGGTGGCGCGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.2048192771084338No Hit
CATCTCTCGGTGGTGTGGATTGGGCGTTTGAGGTTTGGGGGGTTTTTCGG11.2048192771084338No Hit
GGGGGGGGGGGGGGGGGGGGTGGGGAAGGGCCGGGGGGGGGGGGGCGGGG11.2048192771084338No Hit
CGCGGGGAGGGTGGGGCGGGGGGGGGGCCGTCGGGCGGGCGGGGGGGGGG11.2048192771084338No Hit
AGTCATATTCGACTCCAAAACACTAACAAAGGGTCTTCTTGATTATAAAA11.2048192771084338No Hit
TTTCACAAGTGTTTTGAGCCCATATATCTGCCAAAGACAACAAGTCAAAA11.2048192771084338No Hit
ATTTGAGTGTGGGGGGTTGGGGGGTGTTGGGGGGTGGGGGGGGTGGGGGG11.2048192771084338No Hit
GGGGGGCCCCGGAGAGCCGGGCGGTCCGGGGCGACGCCCCGCCCCCCCCC11.2048192771084338No Hit
GGGGGGCGCCGGGGGGGGGGGGGGGGTGGGGGCCGGGGCGGGGGGTGGGG11.2048192771084338No Hit
CCTTAAACCACCTACTACTCATGATAATAGGTTTTTAGTCAATTAATCCT11.2048192771084338No Hit
GAATAAAATAGAATGGACGAACTCGATTCATTATTTACAAAATATAGATC11.2048192771084338No Hit
GGGGCTACTTAATATGGGGCTTGGGCTTATTTTCTGCCGAATAGTGGAAG11.2048192771084338No Hit
CGATGGTCTAGTTGCTCTTATATCAGACGAGTTGCTCATAAATGATCTGA11.2048192771084338No Hit
CGGTTTGTATGGAGGTGTCGCTTGCGGTTTGATTGGGTGCGGTCGGGGGT11.2048192771084338No Hit
ACGTTTTCTCTCTTACCTCAAAATATGTTTGTCTATGTTTCAGTTTAACA11.2048192771084338No Hit
CCATGGTTTCGGCGGATAAGTTTCCTGTGTGCTAGGTGATGGCTGACTCT11.2048192771084338No Hit
ATCATATTAAAATCGCTAAATATAGAAATACAATTCTGAAAAGAAATGTT11.2048192771084338No Hit
GGTTCGCGGGTTCGGGATGGGCCGCGCGGTGGTTGTCCCGTTCGCGGGGG11.2048192771084338No Hit
TATATATATATTTATTGCGATCGGTAGCCTTCAAGAATTTGATTATATGA11.2048192771084338No Hit
CATGTAACTGTTTTGTAGTTAACAATTATATTCGTATCTCTTCGATGTGT11.2048192771084338No Hit
CGTGTGTACCANTCCATCGCAATCGCTCTTCCTGATGGTAAAGTTCTCGT11.2048192771084338No Hit
GTTCGTGAGATGGGTTCAGAACGTAGTTAGACAGATCGCTCCATATCCGG11.2048192771084338No Hit
CGGGTCATAATGTAGCTCTGTGTGTTTGGGGTGCGGGACGGAGTGGCGGG11.2048192771084338No Hit
ACCACATACTTATCAAACTCTTCGTCTCTAGAATCATCACCACCACTGTG11.2048192771084338No Hit
GGGTGGACGCGGAGAGGGGGTGGGCCGTGTGGCGGGGTGGTCGAGGGGGG11.2048192771084338No Hit
GGATTACTTTGCAGGGCAAGGGCGTGCTGGTGGGTGTGTGCGCGGCGGGG11.2048192771084338No Hit
CGGTTTGGGGGGGTGGTGGGTTGGGGTTGTGGGGGGTTGGTGGGGGGGGG11.2048192771084338No Hit
GGGCCCGCCCGGGGGAGGCGGAGGTGGTCGCAGTGGACGGGGGGCGGTGG11.2048192771084338No Hit
CCAACTATTCTATAATTAATTGGGCTAACCTAAAAAAGAATATTAAAAAA11.2048192771084338No Hit
ATTGTCGGGTATATCTGTGGTTGCAAGGAACTGTGGCAATGACATCATTA11.2048192771084338No Hit
GTGGGGGGGGGGCGGGGGGGTTGCGGGGGGGGGGGGTGGGGGGGGTGTGG11.2048192771084338No Hit
CCTGTTGCGGTGTGTTTCGTTGGGGCGGGTCCGTTTGGTTCTGTATGGAT11.2048192771084338No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)