FastQCFastQC Report
Tue 23 Aug 2022
HNCMMDSX3_n02_chi_041.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCMMDSX3_n02_chi_041.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101
Sequences flagged as poor quality0
Sequence length151
%GC59

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCAGCGTTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCT21.9801980198019802No Hit
TGCCGGGTGTAGCCATAGTCCATCTGAGGCTGGGGCGTTGGCTGTTCTCT10.9900990099009901No Hit
GGAAGAGAAACTAAAAAAGGGAACTTCATACTACGTTGGGGACGCGGCAT10.9900990099009901No Hit
GTTTTGGCTACAGGATTTATGTTCTTAATTTCCTTGAGTGGTTATTGGAA10.9900990099009901No Hit
GGGAGAGATTACATAAGAATGAGTGGCCCATATAAAACCCTTGAGGTTAA10.9900990099009901No Hit
GATGTGTTCTAGTCGGCTGGAGAGGCTGTTGCCTGCCGGTGGGGGTGGGC10.9900990099009901No Hit
ATCATTTCCTGGCGTAGAGTGGGTCCATATTTAGTCTAAGTGGGTTCGGT10.9900990099009901No Hit
GACTTTTAACGTTGAACTAAATCCGGAACAATGAACTTGATGCAAATGGT10.9900990099009901No Hit
AGCCAGAACCAGTACCATATCTTTGACTAACTTGAGGCTGAGGTGAATTA10.9900990099009901No Hit
AGTNTAATGGTTGGTGGTGACTTTTGTGCTTAGTTTATTTATGAGTGGGG10.9900990099009901No Hit
GGGCGGGGGGGGGGCGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGG10.9900990099009901No Hit
CTGTTTCCGTTCCATACGGATCCATGACGGGAAAATCGAAACCCTAAAAC10.9900990099009901No Hit
GTTCGGGTGCGGTGGGTAGTGCCGGCGCGGGGGGTGGCTGGGGGGAGCGG10.9900990099009901No Hit
GTATGAGCATATTACTTAATAATTTAACTAAGTTATTCTCTTAAATTGAT10.9900990099009901No Hit
CACTTGCCGGTGGGTTGGGACTCGGTGGTCCAGCATCGCCGACTTCCGTA10.9900990099009901No Hit
ATATAGTATAGATTAGTTTACTGTTGAGTACAATTATTGCGCTGAACATC10.9900990099009901No Hit
TTGGGGCGCGGGGGGGACCGGTGGGGGCGCGGGGGGGTGGGGGCGGGTGG10.9900990099009901No Hit
TTTTTAAATTGTCCGTACCCAAACCATACTCTATCTATCCATAAAGAGGT10.9900990099009901No Hit
CTTCTATTGGTCTTGGTTAGTCACTCAAATAGCGTAGTGTTCTTTCGCAT10.9900990099009901No Hit
GTGCGGGGGGGGGGGGGGCGGGGGGGCGGGGGGCGGGGGGGGGGNGGGGG10.9900990099009901No Hit
CGGTGGCGGTGTGGTGGTGAGGGGGGTGGGGGGTGGAGTGTTGGGTGGAG10.9900990099009901No Hit
CCCAGAATGTTTTGTTTTTGGGGAACTTCATCGTCTCCGCGTTATCGAGA10.9900990099009901No Hit
ACCGAAATCTTCAGGATCCGTCATACGTCCTCTAAGAAAATGTCCATAAA10.9900990099009901No Hit
AAAATAATTAATAAACTTAAAACAGAACAATACAGTTATAACAATCAATA10.9900990099009901No Hit
CCTCGAAAAAATATAAAAAAAATTGAATTAAAAATACGAATTGCTGTGAA10.9900990099009901No Hit
GAACCTGGAGACGCGCAGTGGTGGCAGTTCTCTATTGAGTAACAAACTCC10.9900990099009901No Hit
GGTGGGGGGAGGGGGGCGGGGGGTGCGGGGGTGTGGGGTGGGGGGGGGGT10.9900990099009901No Hit
GTGGGGTGGGGGGGGGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGG10.9900990099009901No Hit
GGTAATGGAGATTGTCGGGAGGGTTGCGCCCGTTTCTGTGGTCGGATTAG10.9900990099009901No Hit
CTTTTAAGCAAGTGATCTTTGACATTTAAGGTCAAAATCCTCCGTAGTAG10.9900990099009901No Hit
ACTGTATGCGGTTAATTACAGTTATACTAGGATTTTTGGATAATTAAATA10.9900990099009901No Hit
AGGCGTGGGTGTGTCCGGGGGGGCGTGGGGGGCGGGAGGGTTCGGGGGTC10.9900990099009901No Hit
CTCTATATATCNCTTTTTTTTGCGGGGCGTGTTGGTCTGCGCTTGTGTTT10.9900990099009901No Hit
ACTTTGCACTGATTGATTCAGAGTTGTGAGGGGCGCGGTTTGAGGTCGTT10.9900990099009901No Hit
CAATCATACACATGACATCAAGTCATATTCTACTCCAAAAGACTAACCAA10.9900990099009901No Hit
GTGTCTGGGCTTGGGGTTGATGGCCGTCGGAGGTGTGGGGGGTGGGTGGG10.9900990099009901No Hit
GGCGGGGGGGCGTGATGGGGGTGGCGTTTGGGGGGGGCGTGGGGGGGGGG10.9900990099009901No Hit
TCTAAGCTTTGGTGTTTGTAAGAAAGTTGTGCAGGTGAGTTTCCTTACAT10.9900990099009901No Hit
CTTGAAAGATCCTTCTCGCCCAATCTGCAAGGTAACACGATCTGTCTCTT10.9900990099009901No Hit
GACGGGAGTTTAGTGGGGGTGTGTGAGTGGTCGGGGGAGGGGTTCGGCAG10.9900990099009901No Hit
CATCTTCGCTGTACTTAATCGGATTTAGCCACGTTGGGCCTGTCTCTGCA10.9900990099009901No Hit
CATACACATGACATCAAGTCATATTCGACTCCAAAACACTAACCAACCTT10.9900990099009901No Hit
GTGTGTGGGTGCGGTAACATGCTCGTCTGCGGCTATAGGGCGGTGTGGAT10.9900990099009901No Hit
TACAGATTCGGCGAGGAACGGTGTCTTCACGTTCACCTAAGTCCGCCGAT10.9900990099009901No Hit
AACCAAAGGAGATGAACTCCGGTCTTAATGTAGATGCTGGGATATGGAGT10.9900990099009901No Hit
AATATAAATCAATCATAAAAAACATATAAGCTAGATTCAAAACAAACAAA10.9900990099009901No Hit
GCTCCTGGTGCCGACACGACGAAAATACGGTCGCCGCGTGGGGACTTTTA10.9900990099009901No Hit
GGATCATTGTCGATACCTGTCCAAAACAGAACGACCCGCGAGCCAAAGAT10.9900990099009901No Hit
GGGCCGGGGCGGGGGGCGGCGGGGGGGGTGGGGGGGTGGGGGGTGTAGGT10.9900990099009901No Hit
GTATGGGTGCACTGACTGTGATATCAGCTTTTTTGAGGCGCCCTGAACTT10.9900990099009901No Hit
GTTTTAGTGGGCGTGGGGACCGGGGGGTGGGGTGGGGGCGGAGGGTGGCT10.9900990099009901No Hit
ACCCCATCATTCACGTATCCCGGGCACCGCGTTCGCGTCCCTTCGGTGGC10.9900990099009901No Hit
GTGACGGCGGGGGGCCCGGTGGGGGGGGNGGGACGTGGGGGGTCGGTTGG10.9900990099009901No Hit
GTCGGCGGGGTGGGGGGGGGGGGGGGGGGGGGCGGGGGGCGGGGGGGGGG10.9900990099009901No Hit
GCGGGTGTGTGCGGGGGTGCTTGTGGGGGGTGCCCGGTGGGTGGGGGGGG10.9900990099009901No Hit
AGTTTGGGGGGTGGGGGGTTTTGGGGGTGGGGGTAGGGGGGGGTGGGGTG10.9900990099009901No Hit
CTCAATGTGTCCGAGCATGCCCTACAGACGTATTAGAAATGATACCTTGG10.9900990099009901No Hit
AGGTTTGCGGGNTCGTTTGCGTACGGATAGTGGGAAGCTTAGGGGGTTTG10.9900990099009901No Hit
CGCGGCTGCAGCTCGCGGTGGCGAGGTCCCTGGCCTGTGTCCACAGCGCC10.9900990099009901No Hit
AGTCGGAATTTNGAGGGGCGTTGGGGGTTCGGGGTGTGGCTCTGCGAGAT10.9900990099009901No Hit
ATAAAAGTACGTAGACTTTTTATGCAAAACAACATATAATGTTTTAACAC10.9900990099009901No Hit
GGTCGACTGAGGCGGTGTGGCGGGTTGCGTTTGTGGCTATGCCTCGTTGC10.9900990099009901No Hit
ACGTGGGGTGGGGGGGGTGGGGTCGTCGTGGGGGGGGTCTGGCGGGGGGG10.9900990099009901No Hit
ATAGGGGGGGGGGGTGGGGACGGTAAGCAATCTTGCCGCTGGGGGCGGGC10.9900990099009901No Hit
GGCGCGGTTCGGTGGGGGGGGTGGGGTAGGGGGGGGGCGGTGGGGCGCTG10.9900990099009901No Hit
CAAATATTCAGTTAGCTTAACAAAGTGGCCATGCAGATCAGGAAGAACAC10.9900990099009901No Hit
GTTTGGTTTCTTGTTTCGGTCTTTAGACAACAATTACCCACAGCTTTAAA10.9900990099009901No Hit
GTCTAACATAAAAAAAAAAAAGAAAAAAAGAGGGTTAAGTTTCGTTTTTT10.9900990099009901No Hit
TTATGGACCCGAACCTGGGTGATCTATCTATGACCAGGATGAAGCTTGGG10.9900990099009901No Hit
ATACCAACCCAAAGACCTCTCCAAAAGGCACATTTTTTTTTATTATTATA10.9900990099009901No Hit
GCTTTAGCGCACCCAACCGTCCTGGGTGAAAGGTCGACCCACTCTATCGG10.9900990099009901No Hit
TGATNAAACATTCATATTGCCCTCTGACNGAAATAAGAACTTTAAATTAT10.9900990099009901No Hit
TTGTAGACAAGGAAGCGGTTGAGGAAGTGAGATCTCTTAGAGAGATTCCA10.9900990099009901No Hit
ATTTTTTAATTGTCCAGCGATAAATTCTGCAAGAATATTAAGATNCCCAT10.9900990099009901No Hit
TTGTGTGGGTGGGGGGGGGGGTGGGGGGGGGGCTGGGGGGGCGGGGGGGG10.9900990099009901No Hit
ATGANAGCCTTTTCAAGAAACAAACCTCNAACGTGACGTCATGATCCATT10.9900990099009901No Hit
ACTACAAGAGCCTCATAAATACTTGAAACAAATCAAATTTTGCAGTGTAG10.9900990099009901No Hit
ATCAATAGGTCTTCAAATCGTTCATTTGAAAAAGTTGAAACCCTTTTTCT10.9900990099009901No Hit
ATAACATACTAAGAAATAAGAATTAAGATATATAACTAAAAAATCTAAAC10.9900990099009901No Hit
GTGGTCGACCAGGAGTTGAAATCATCGACCGGGACCGAGAAGTCGTCGAC10.9900990099009901No Hit
ACAGTGGGCCGCGGGGCAGGCGTTGGCTGGGTCCCGGGGAGGGGGTTTGG10.9900990099009901No Hit
GGGCTTAGGGTGGGGGGGCGGGGTGGGGGGGGGGGGGGGTGGGGGGGGGT10.9900990099009901No Hit
ATTTCGATGCAGTCATTGGTAAGGGTGCTGAAGTGAAGTTGGCAGCAAAT10.9900990099009901No Hit
CGCGTAACATTGGTCCGGAGAAACCCCAATTTATTGCTTCTTCCCCACCA10.9900990099009901No Hit
ATATAAATATTATATATATATATATTTTTATTATATGAAACAGAGAAATA10.9900990099009901No Hit
GGATCGTTTGTTTAATAATACTGTTACCGTATTACTGCGGCGTGACCCAT10.9900990099009901No Hit
GCTTGGCCGGGGGGGGGTGTGGTGGGGTGGGGTGGGTGGGGGGGGGGGGG10.9900990099009901No Hit
ACCGCCATGTACGGATACCCCATCTAGGCTTAACGAGGTTTGATGCTTGA10.9900990099009901No Hit
AATTGTATCCTTGTTAAAAGACACAAAGCCAAAGACTCATATGGACTTTG10.9900990099009901No Hit
TGGCGGGTCGCGGGGGCTGCGCAGGGGCTCGGCCTGGGGTGGATGGCGTC10.9900990099009901No Hit
CGTCGCGGGGTTAGGGCGCTGGCCCGGGGGGTGGGGTGCGGATGGGGGGT10.9900990099009901No Hit
GTATAAGTTAAACAGAAAACTGAAGCTATATATACGATTACAAAATGCAA10.9900990099009901No Hit
TATCGATCGCGCTCCTGGGCTTCTGATCGATTTGCTGACGTGGACGTTGC10.9900990099009901No Hit
AGGGGGGTCTGGGTGGGGGGGGGGGGGGGGGGTGTGGGGGGGGGGGGGGG10.9900990099009901No Hit
AGGGGGTGGGGGGCGGGGGGGGGGGTCGGGCGTGTGGCCGGTGGGGGGGG10.9900990099009901No Hit
CAAGTAGATAGCAAACCCTTTAACGCCCACATGTCCCTCTCGTGTGTCGG10.9900990099009901No Hit
CTATCGTATTGGAAGATATATCCTTCTATCAACAATATGAAGAATATTTA10.9900990099009901No Hit
ATTCAGAAGTTGGGCTTTGCGATTCACCTACGCCTGTTCGTCGGGCTCGA10.9900990099009901No Hit
ATGTGGGTGCGGTCGCTTGGTTGGTGGGTGGGGGGGTGTGGTGGGGGTGT10.9900990099009901No Hit
ACTGTATACGCTATGCTCGGTGGTCATCGGTACGGGGGGCGGCTTGGGCT10.9900990099009901No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)