FastQCFastQC Report
Tue 23 Aug 2022
HNCMMDSX3_n02_chi_035.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCMMDSX3_n02_chi_035.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences155
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTTCTCAACATTATTATAAAAACGGAGATATATTTAAATTAAAGACAAA21.2903225806451613No Hit
CTCTAGCGTTTTGCTTTTTTCTTTTAATTTGTTTTAAACCAAAATAGCTT21.2903225806451613No Hit
CAAACATGCAGAACCATGATAGTGTAGCAGAAATAAGACTTTAATGCAGT21.2903225806451613No Hit
GTATTCAAGTTTGTTTGTTTCATTGTATCTTGCTCACAATATCGGCCATT21.2903225806451613No Hit
ATATTCGACTCCAAAACACTAACCAACATTCGTCTTGCTTCTCAAAGCTT21.2903225806451613No Hit
GGTTTATGATACTACGAGCGTCAAAAACTCAACTCAACTCATTACCCAAT21.2903225806451613No Hit
GTCTTTAAGTGATGATGGAGTTTTGCTTTGATTTCGTTATTGATTTCTCA21.2903225806451613No Hit
CATCATCAGGGTCTGGTTGCCTGGCTGCATTCGTTTCCCCGCGAACAGCT21.2903225806451613No Hit
ACTTTTACTGGTTCAATCAATTTTCCCCGAGTTTGAACACTGACATATAC21.2903225806451613No Hit
CGGCCGACCCATCCCAAGGTTCAACTACGAGCTTTTTAACTGCAACAACT21.2903225806451613No Hit
GGAACAAAGGAAGTCAGACGTTATGGGGAGAAGCTAGTACATGACTTACG21.2903225806451613No Hit
ATATAGTATATACTATTTTAAAATATAGATGGTACAGAAGTAAAAGGCAT21.2903225806451613No Hit
GACCCGGGTTCGATTCCCGGCTGGTGCAATAGAGCTGTGATGAAATCGGT21.2903225806451613No Hit
CCTTTGCAGAGGCCTTACTCGACCTTCGGGATAGAGTGTTTCCGACAGGA21.2903225806451613No Hit
CTCCTGGTAATTATATTGAAGCACAGAATTGGTTGACGATCACGAGGCGC10.6451612903225806No Hit
CTTCTACTCAATCATACACATGACATCAAGTCATATTAGACTCCAAAACA10.6451612903225806No Hit
CACTAAAATACGCCGTTAACGGAAAACAAACATTAACGGTAGCTAAAAAC10.6451612903225806No Hit
CATCAAAGGAGAACTAAGTACATCATTAAGTGAACAAAGAAAAAGCTATT10.6451612903225806No Hit
TTTCATGGTGTAGCCAAAGTCCATATGAGTCTTTGGCTTTGTGTCTTGTA10.6451612903225806No Hit
GGGTTCGTGGGATCTTTGATCCGGATCGAAGTCATCCACCTAGTGGGGGG10.6451612903225806No Hit
CATTTCTGTATAAAAGCATCCCCACCATCGAAACGGCAAAGACCGAGGTA10.6451612903225806No Hit
GTATAAGAACTTAAACCGCATCCTGATCTTATAAGCCTAAGTAGTGTTTC10.6451612903225806No Hit
ATTTATAATCTTTTCATAAAACGTGAGAGATTATATTTTTGAGAGCCCAC10.6451612903225806No Hit
CATTTCAGGAAGAACACAAGCAAGAGTGGTAGCTATGTAATAGCTTAAAC10.6451612903225806No Hit
GTATGATGAAGCTAATAGATAATTCATCAATTCATAGTTTGGAAACTAGT10.6451612903225806No Hit
GATTTTGGAGGTTAGTTATGGAAAAGCTTAAGATTAGACGCAATGTATTT10.6451612903225806No Hit
GGATTTTTGTNTGTTTTAGTTTTCTTACAAAGGGACACTTTTTATTCCAA10.6451612903225806No Hit
ATATATGCATTTAGGTGGATCAAGAGACGACGATCATCAGCATCTTCATG10.6451612903225806No Hit
ATCAAAAGAGCATCCAATGGAGAGCGGTAAGGAGAACAAAGGCAAGTCCG10.6451612903225806No Hit
ATATATTAGTTACGTAATATGCATATGTTTATATTTACTATGTATATATG10.6451612903225806No Hit
AGTTGTGATAGTCCGGACAGGACTAATTATACCATGGGAGACACGGGGTT10.6451612903225806No Hit
ATGTAATCACAACACAACACTCATCTATGTTTGACCAATTCACAACAGAG10.6451612903225806No Hit
GATGTATTTCTCGTGCATCTTATAATTCTTGTGGCTCTTGAGCAATCCAC10.6451612903225806No Hit
GCTTTCATGGTGTAGCCAAAGTCCATATGAGTCTTTGGCTTTGTGTCTTC10.6451612903225806No Hit
AGATCCGAATCATTCTCAACGAATCCATAAGAAGTGATCCTATTTTTTTC10.6451612903225806No Hit
GGTTACAACCAAATTTATTTATTTTAAAATAAATCTTACATATCTAATCA10.6451612903225806No Hit
GGCAATACTACAAGGCCCGTCCGCAGAACTGCACCGGAAATTGGAAGAGA10.6451612903225806No Hit
TGATAAGACTTCTTGCACTTGCAGAGAGTATGATGTGAGTGGGATTCCTT10.6451612903225806No Hit
GCTCCTCTCTAATTCAGCAATTTAGATAAGTCTGTTGCAGAGAATACCAT10.6451612903225806No Hit
GACCACCTCATGGTATCCAAGTTGAAAGAGATAAATTGAACAAGTATGGA10.6451612903225806No Hit
ATTATATGTTTTGGGTATTTATTTTCTGTTGTTATGATCTCCCGTAATGT10.6451612903225806No Hit
AAATTGTAACAGGTGTACCTGACGCTNTTCCGGTAATAGGATCACCTCTT10.6451612903225806No Hit
GGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCG10.6451612903225806No Hit
GCTGCCTCCCGNAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGAT10.6451612903225806No Hit
CGGTTGTAGGTAACCGTAGTTAGCAAGGGTCGGTTAAGCATGGATGTTGG10.6451612903225806No Hit
AACGTATTCTGGCCGCGTTGTACTGTTCACGAGGGAGGCGGGGCACCCGG10.6451612903225806No Hit
CACTCATACACTGTGCAAAGAGTCATCAAACCTCGCCCAACCTGACCAAC10.6451612903225806No Hit
GTTCCAACAGTCATGTATGATCGTGATGCACATCCGTATTTTGATGACCC10.6451612903225806No Hit
GATGCAGCCAATGTCCTTTGTTTACCCTCCTCCTTACAGTCAATCAGTCC10.6451612903225806No Hit
ATGTAATATCATAGGTGAAAATGAAATTACTTTTTTTTTTCTAGTCTTTA10.6451612903225806No Hit
TAGGCTTAGAAGATCGGGTTGCGGTTTAAGTTGTTATACTCAATCATACA10.6451612903225806No Hit
ATACATATCAACTTGGTCATATACTTAGGCGGAAAATTTCCCTCCCAAAA10.6451612903225806No Hit
TCATTATCATCTCGTGCCTCGTCTGCGCCAATCCCTGTCTCTCTCTTTGC10.6451612903225806No Hit
CCACTATCTCCGCTCCTACCGTTTCCACCACCGCCTAGTGTCTTCACACT10.6451612903225806No Hit
CCACATTGGGAGCCTATGCATCTCTCCAACCAAAGTTCTGAACTCCAAAC10.6451612903225806No Hit
CATCATATCTCTAATCATGTTAGGGTTTTGAGCTAGTTGTTGCTGTGTCT10.6451612903225806No Hit
GTGTAATTATTAAAGAGATTTTCTGAAAGTAATGGTGATAAATCATCTTC10.6451612903225806No Hit
GATAGAAAGCATCTCTCTTTTGTCTCTCCTGACCGAACCCGCCAAAAAAA10.6451612903225806No Hit
ATGCTACGCGCATCCGGAATACCATGGGATCTTCGTAAAATTGATCGTTA10.6451612903225806No Hit
TTACTATCCTGATGGTCTTAGCCCATGTAACACTTTCAGTGACAGAAGAT10.6451612903225806No Hit
ATGTAGATTCCTTTCCTTATTCCCTTTCTGGTAACCATAACACGTCCCTG10.6451612903225806No Hit
ATATCTCACATGTGAAATCATCATGATCAACTTCTCTCTCTGTCTCTTCC10.6451612903225806No Hit
GCCAAGAGTACCTATATATACTTTTCTTTCTATGAAGTCAAGGAATTTTA10.6451612903225806No Hit
GGTCATATTCAACTCCAAAACACTAACCAACCTTCTTCTTGCTTCTCAAA10.6451612903225806No Hit
GACTTTGGCTACACCATGAAAGCTTTGAGAAGCTAGAAGAAGGTTGGTTA10.6451612903225806No Hit
GTCCAGCGGATCATCTGCCATCACACGCTCCTGACCGCTTCGCGCAGCCT10.6451612903225806No Hit
GAATTGATGTCCTTTCATTGATTCCTCCTAAATTGCATTGATTTATCCTA10.6451612903225806No Hit
CTCTCGTCGAACCCAACAGCTGTCGAGCTGGTTGCAGATGAGCTTCCTAA10.6451612903225806No Hit
AATCAGTATAACTGGACAAAATGAAATACTAAAAACGTGAAAATTGAAAG10.6451612903225806No Hit
GTTATTAAGTTTAAAAACAACTAGGATTTAACCCGTGGTTTACCGCGGAC10.6451612903225806No Hit
CTCTTCTCTCTCTTCATATTTTTTTCATATATCCATCCTTCAAAACTAAA10.6451612903225806No Hit
GAAGAAGAAGCTTTGTTTTTGGGTTTAGAGTGTTTAGTCACGTCTTTGAG10.6451612903225806No Hit
GGGAAACAGATCATCTGGTGGTTTGAAATTTGTCACCACCTGCTACGGGA10.6451612903225806No Hit
GGCGTAAGAATTGTATCTTTGTTAGAAGACACAAAGCCAAAGACCCATAT10.6451612903225806No Hit
GTCTACATAACCATTTTTTTTTTTTTTTTTGCATAAATGAAAGTGAATGG10.6451612903225806No Hit
GTATATCATTAAGCATAAATGTCTAAAGAGTATATGTAAAATATTAAATA10.6451612903225806No Hit
AATATGACTTGTTGTCATGTGTATGATTGAGTATAACAACTTAAACCGCA10.6451612903225806No Hit
AAACAAAGCCATTACCAAGCGAGGAAGAACTGGCAGCTTATAAACACGCT10.6451612903225806No Hit
GATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTT10.6451612903225806No Hit
TCACAAATGTTATTATGAGATTTAAAAGGTAAGTGTTTTTGTTTAGCCAA10.6451612903225806No Hit
GGATTTTTGTTTGTTTTAGTTTTCTTACAAAGGGACACTTTTTATTCCAA10.6451612903225806No Hit
ATCATACACATGAGATCAAGTCATATTCAACTCCAAAATACTAACCATCC10.6451612903225806No Hit
CTACAGATCTCTCTGTTGCTCTTTCCTTTCGTTTGCTATGTCATTTTCCC10.6451612903225806No Hit
TTTTGTTAGTCCTTGAGCTAACCAGATGATTAAGAGAGAGTCTGTCCTTT10.6451612903225806No Hit
GTTTTGGAGTCGAATATGACTTGTTGTCATGTGTATGATTGAGTATAACA10.6451612903225806No Hit
ACTCAATCAGACACATGACATCAAGTCATAGTCGACTCCAAAACACTAAC10.6451612903225806No Hit
TTTCTAGGCTTTGGCTGACATGAGATCAATCAACCTTTTCGGGGTTCAAC10.6451612903225806No Hit
CTGGTAACCATAACACGTCCCTGCTTTTTTCTGTCGTTGACTGCTAGAGC10.6451612903225806No Hit
ATTCTAATTGGTCAATAAAAATATATTGAAAGGCTAGTTCTTTTGTTTTT10.6451612903225806No Hit
CTTTTAGATAATCTATAATGGCATTTTTAGACTGAACATCAACACCAACG10.6451612903225806No Hit
GTCTCCCTGATCAATTCAGTTGGTTAACAAATCTCAATTAAGCTATCCCA10.6451612903225806No Hit
GTATGCATGTATGAATGTATGAATGTATGCATGTATGCATGTATGGATGT10.6451612903225806No Hit
ATACTCAATCATACACATGAGATCAAGTCATATTCGACTCAAAAACACTA10.6451612903225806No Hit
CTGCTTCCCTATTGCTTGAGAGAATGGATGGTTCAAGATTATATATCCGT10.6451612903225806No Hit
CTCAAATCTAGAGAACTAATAATTAAGAAATCTAAAGCCTAATAGATAGT10.6451612903225806No Hit
ATATTACATATTACACGTACATGGAAATTGTCAGCCACATATAAAATGAT10.6451612903225806No Hit
GGGTTACTAACATATAAAGTATTAGGCTCCCAAAGATCATGCGAATAATT10.6451612903225806No Hit
GTGTGCGCTTCGTTGAAGAAATTTTGAAATTTGCAGAGAAATTTGCGGAG10.6451612903225806No Hit
CACATACACATCTGTATTTATTAGTTTTGAAATAGTAATATTTATTGATT10.6451612903225806No Hit
GAGCATGATTTTCCTACCCCCCCGGAGGGAAAGGTCCTTCCCTTTTGGGC10.6451612903225806No Hit
GTTTGGCTTTGTGTCTTCTAACAAGGGTACAATTCTTACGCCTTTAAGAT10.6451612903225806No Hit
TTACTAAACCATGTCCCGTGCTTGCTCTTTGTGACAGAAAGGAAAAATCA10.6451612903225806No Hit
ATAATTATACCGTGGGAGGTAGAAAGCTTCCGGCTTTATCACATCCCATA10.6451612903225806No Hit
GTGACTATCCAGTATATGATCAAGGGGGTAGCGAAAATTCGTGGAACCAG10.6451612903225806No Hit
GCTTTCATGGTGTAGCCAAAGTCCCTATGAGTCTTTGGCTTTATGTCTTC10.6451612903225806No Hit
ACAGTCAGTGGGTTACTGAAATTGGGGGGGGGGGGGGGGGGGGGGGGGGG10.6451612903225806No Hit
TAGCTAATCCCCTGAAGCGAGTGCTACCAAATTTTGTTGTAGGAAACCAA10.6451612903225806No Hit
GTTCAAAATCGAATCCCAATCCCAACATTATTCACAAACAGAAGAAGTCG10.6451612903225806No Hit
ATCTATATGAAGAAGAAATCATGTAACGAAGGGGATTCTTATTTGTACAA10.6451612903225806No Hit
GTTTAGCAGAAAGACGGATATTCCTTGCTCATTATCAGACAATCACTTAT10.6451612903225806No Hit
ATATATGAGTCGGCACTATACAGATTTAATTGATTTATATAAATAAAATC10.6451612903225806No Hit
CTTCGACACGCCTCCACTCATCGGAGGCTTTGTAACCTGATCTCCTCCAG10.6451612903225806No Hit
TTTGAATACTTATGTTATATTCTAAGAATTTTAACGCATACGTGTCACGT10.6451612903225806No Hit
ATAACAAGTTTTGCTAAAGTAATAGATCGGTTTCTGTCCTTCGTGATCCT10.6451612903225806No Hit
GAAATATTAGGCTCCACCTAATAGGCTAATACCCATTGTTATAGACTACC10.6451612903225806No Hit
CTGGTATTAAACGCGAGCTACGAGCAAATAGAACACCTTTCAACAGTATC10.6451612903225806No Hit
CCCTGCTCTTAGCCATTCCAATCTAACAGTAAAGACTCTTAAAATTTCCT10.6451612903225806No Hit
ACCTTCTTCTTGCTTCACAAAGATTTCATGGTGTAGCCAAAGTCCATATG10.6451612903225806No Hit
AATTATTATAATTTAATTAATATTCCTAATTATTAGCATTTCCTTATCTA10.6451612903225806No Hit
ATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGGTTAACCGTA10.6451612903225806No Hit
AGTTCGTATGAGTCTTTGGCTTTGTGTCTTCTAACAAGGATACAATTCTT10.6451612903225806No Hit
GAAGATGCGTTGCTGTTGAAATCGGGTAAGAAGGTATCGCCCTTGAGAGA10.6451612903225806No Hit
CACCAGTACGCATTTGATTTAGTCCACCATTACTTCTCACTGTTATATAA10.6451612903225806No Hit
CTTAAAAAAGAATAGATACGATTGCATTGCATATACTAACGGATGCGATC10.6451612903225806No Hit
GCCTTTCCCCAACTCGCTGCAATTAATGGGCAGCTGGAAGTTGAAGCTCT10.6451612903225806No Hit
TGACTAAATAACATAACGAAAACGTAGAAAATAACGTGATACTATCATGC10.6451612903225806No Hit
GGCCTAAATCCGAGCCAAGGACGCCTGGAGCGTACCGACATGCGGTGGTG10.6451612903225806No Hit
CATGTGTATGATTGAGTTTAAGAACTTAAACTGCAATCGGATCTTAAAGG10.6451612903225806No Hit
CCCTTCTGTGATATTAGCTGCAGCATATGTAGCTGGATGGGGACCGCCTA10.6451612903225806No Hit
GTATTATATTTTGTGTGGAACTTAACTTGTTCACACGCATAGCCTTGAAT10.6451612903225806No Hit
GTATCGGATATCGACACGAGGAATGACCGACCGTCCGGCCGCCGGGATTT10.6451612903225806No Hit
TATATATATAGTTTATTGTATATTATTGGTTGTGATATACCTGACCAGAA10.6451612903225806No Hit
TATTTATATAGAGGAAGCTTTTAAGTTGGTTTTTACGTGCCACGTCAGAC10.6451612903225806No Hit
GACTTGATCTCATNTCTNTGATTGAGTATAAGAACTTAAACCGCAACCGG10.6451612903225806No Hit
GGTTAGAATGACGACGATGTCTGATCTTGACGAAATTATGGTAGCTGAGA10.6451612903225806No Hit
CGTTCTTGTCCTTGTCGGAGAACGCCATGGCGCTCAGCAGGTTGCTGTCG10.6451612903225806No Hit
GGTCTGTTCCAGTGTAGAGGAGATTTAAGTAACCATGACTGTTACAACTG10.6451612903225806No Hit
GACTTTAATCAACAAGCACTAAATTTAAGATACTGGTGTTGTGTAATAAT10.6451612903225806No Hit
ATTATATTCAGAATAAACCATAACAAAGGATTAAAAATTACACAAGACAA10.6451612903225806No Hit
CTTTTACAGGAGATGGTTAAAGAATCCGAGCTCGAAGCTGCTTGTCATAT10.6451612903225806No Hit
TATTATGGAGTCTAGAAAATGGCTGTCCCCTTATTAACTTATACTTAAGA10.6451612903225806No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)