FastQCFastQC Report
Tue 23 Aug 2022
HNCMMDSX3_n02_chi_029.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCMMDSX3_n02_chi_029.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences117
Sequences flagged as poor quality0
Sequence length151
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTATAATCTATGATTCCAAAACTGGTTTGCTCGGATCATGCATCATAAC10.8547008547008548No Hit
ACATACATGTTTATATACACCATCAATCCCATTTAAAACAAATATTAAAT10.8547008547008548No Hit
GCGCATACGTTTCCTTTAAGCAAAATACTAGGCACGGGACCTGTCTCTTA10.8547008547008548No Hit
CTTGTTAGGTGTTTCTGGAAAATTTCAAGACGTGTGATGAGAGTAAGTAG10.8547008547008548No Hit
GATATAGACTGGCTTCCATCTGTTGCCTCAATAAACGGTCACCATGGCTG10.8547008547008548No Hit
CAAAAAACATGAAAAAAATTCACAAAAAAAAAAAAGTTTCTGAAAATAAA10.8547008547008548No Hit
GTGATTATCTACACGCATAAGGATACTCTATTAGCTAGGCTAACGGCTTC10.8547008547008548No Hit
ATATTGGTGGGGGAAAGCGTAACCGGTGCGCTGCTTTCGTGGGTAAGCCG10.8547008547008548No Hit
ATATTGGGCTTATATTTGGCTATCTCAAACAAGTTGGCCCAAACTTTAAT10.8547008547008548No Hit
GATGAGATGAAATGTCCACAAACTCCTTATTTGCAAGGCTTTAGACATGC10.8547008547008548No Hit
CATAATAGAGTAACATTCAACAATAAAATTTTCAAATTTTAATAAAATAT10.8547008547008548No Hit
ACCCGCACACATACGACACCTGCACCAGGACCGCAGATCAGGCCAGTGCC10.8547008547008548No Hit
GGTCGCAGTTGCATTTGTGCTACTAGCACCAAGTTGTGGAGCGACGGCGG10.8547008547008548No Hit
ATGTCGTCGTTTGCGACAGGGGGAAAGCCGGCGGTAGTATCAGAAGTTCA10.8547008547008548No Hit
AAATATAAAAATTATGACCTAGTAAGAAAAGAAAAGATGATATTAAGTTT10.8547008547008548No Hit
ATATAAAAGTATTAATTATCAGAAACAAAAGACGTAATATTATTTTGCGT10.8547008547008548No Hit
CTAAAAAATCACCTGTTTCATCCAACGATCCTAGCATCACAATTCCATAT10.8547008547008548No Hit
CAAGAACCACCAAAAACTTCGTACTAGACCATCATAAGCTACTGGAATCA10.8547008547008548No Hit
AGACCACATTTTTCTTCATCTTTTGAAAAAGATATGCTCAAGTTAAAATT10.8547008547008548No Hit
TCCTACAACATTGAATACGTGTGCACACCATTAACATAGCTCTAAACAGG10.8547008547008548No Hit
GTTTTTTCAGACACCACATGAAAGGAATACACAAAAAAGATCTTAATGAT10.8547008547008548No Hit
CTCTAATGCTCTGTACAGCGCAACACACAGAGCAGACTTCTTAGCTCAAG10.8547008547008548No Hit
CTTTAAAAGTTCCGATTACAATCTTCTCCATTACTTCTCGACAATAAAAA10.8547008547008548No Hit
ACATCAAACACCAGAACTATAATGGGATAAACACACCGCAGAAAACCTAA10.8547008547008548No Hit
GTCGAAAGTGTGATTCCAAATCTTCTCCATCTCAAGCCAGTTGATAAAAA10.8547008547008548No Hit
AGCGAGGGGTGAGTGTCGCCCATGGGCATCGACACCTTGCGGCTAGGAAC10.8547008547008548No Hit
GTAGTAGTATCCTAAGGGGGCCGCTACTATGGTAGAAAGAGATCTCGTTC10.8547008547008548No Hit
CAATAAACTCAATACGATAAAAAAAACACAAATCAAAACCAGCAGTAATT10.8547008547008548No Hit
TCGGGCGGATCGGGCTGGGTGTCAGTGTGTGGCTCCCCTTGGAGCCGGGC10.8547008547008548No Hit
TGTGTTGGTTATGTTGGGAGCAGTGTCCATAGCTTTTGGATGCGGTGAAT10.8547008547008548No Hit
GCATAAGGCGGTCTCGGGTGGATCGTCGGAGAGGAAGAGCGGTGCGGGTA10.8547008547008548No Hit
CAAAAGAACTCAAAACGTCATATCCTACCCAGAAAAATTTTACATAAGAT10.8547008547008548No Hit
GAATTGGACATGTGGCTGCCCTTCTACAGAATGTTATTGAAGGTAAGCAC10.8547008547008548No Hit
TCAAATGNCAACTTGTGCAGACCACAGTGTCCTATAATATAGTCAATCAT10.8547008547008548No Hit
CCGATCAACAGTAACAATCCATTCAGATGAAATGTCAAAGACAAAATATG10.8547008547008548No Hit
ATCTAGTATGTGCACCTTGTTTATCTTCGGAGTGTGGGTGTTGCGCGCGG10.8547008547008548No Hit
ACCGTGACCAGCCCATATATATTTCTCATTAGCTAACTTTTAAAACACAC10.8547008547008548No Hit
ATGTACAATAGTTCCGCCTCCATACTGTGCTATGAATGGTATTGTTGGCT10.8547008547008548No Hit
GTTAATTTTGTGCTCCATAGCGATTCCATGGCTTCGTTAATGGTATCTCT10.8547008547008548No Hit
AGTCCTCACTTCGCAAGGCCCTGGACCTTCCGCCCAATTTGGGAATGACT10.8547008547008548No Hit
GGCCAGTGCTATGGCAGATTTCTGGTGGAGCGCTAATGATCATCAAAGGA10.8547008547008548No Hit
ATATATTAGTGTTCAGAATATTTTATATAAGAAAGAAAATACTATCAAAT10.8547008547008548No Hit
ACGTCGCGCGGTCTGCGTGTGGCGGGGGTGCGGCGGGGTTGTCGGTGTGT10.8547008547008548No Hit
GCCTAGTGAACAAGAGCACAGATAAGAAGGTGAAGCAGACCAAGTACAGG10.8547008547008548No Hit
TTAAAGTTCAATTCCCGAGGAAACACGTCGGGAAGACCCGCTTCTAGACA10.8547008547008548No Hit
CAATAGGAAAATGCTAAATATGAAATAATATTTACATATATATCTTTATT10.8547008547008548No Hit
AGGCTGTCCCGAGTGTGAGCGAGGTGTGAGTGTCGCCCATGGGCATCGAC10.8547008547008548No Hit
CTACTCGGTTGCGACACTGTAGGGACGTTCTCGTGGCCACTTCTCGACGG10.8547008547008548No Hit
GATTGTAAAACCATCACAAACCTCCCTGTTTTCTTTTCTAGTTCAATTTC10.8547008547008548No Hit
CGCTGCAGCACATCCACATGGAATGCCCGCCGAGACTGTCATCCTAGCAG10.8547008547008548No Hit
CAGCTCGTGCTGTCGCCTCTCCAGTGTTTGTCTCGCTCGCTTGTTGTGGG10.8547008547008548No Hit
GGGAAGCCTTGTTCGTGTCTTTTCCTCCGCTTAGGGATATGCTTCAACTC10.8547008547008548No Hit
AGTAAGATTCTCTGTTGATTGATGACTGTGAACGAGGGAGAAGGAGTTGG10.8547008547008548No Hit
AAGAGATGCAGTATGCGTTACTAAATTTTTTGATCTTGTCCTCATTTAAA10.8547008547008548No Hit
GCCTTGGGTTGGGGCGGTGGGGGTGTCGGGGGGGGGAGGGGTCGGGGGGT10.8547008547008548No Hit
TTTACTCCCTTATGCCGCGTGCTTGAGTGGCTCGACCGCGGGGACGGTGG10.8547008547008548No Hit
GGTAGTAACGTGAAAGGAGAAAGGGACGTGTTGAGGAGCAAAAATATTAT10.8547008547008548No Hit
ATACTCAATCATACACATGACATCAAGTCATATTCGACTCCAAAACACTA10.8547008547008548No Hit
ACTTTGGGTCATCTACAGCTTCCGGACAAGAGCGACCGATAAAATGTAAT10.8547008547008548No Hit
TATAACAGATGGGTACGAAAACACGACAAACATGACATAAATTATGAAAC10.8547008547008548No Hit
CGTATAGTCAGTTCCGAGTCTTCGCGATACAGACCGGGAACTCCTTCGTT10.8547008547008548No Hit
ATTGAGCCGTGGCTCCTACGGGGGGGGGGGTGCGTATTGGCGGCGGGACG10.8547008547008548No Hit
GACTTCACTGANCTTCCCTCGCAAGAAATATGGTGATGTCATGGGCCAGA10.8547008547008548No Hit
CTTTTAAGAATAAGAACAGTTTGCTTGTTATATGAATCAAATATTTACTC10.8547008547008548No Hit
CGCGTGGGGGGTGGCCGTTGGGGAGCGCGGGGGCCTGGCTGGGGGGGGCC10.8547008547008548No Hit
GGAGTTGGTAGAGTACACTGAGGGTATGAATCTTGAACCTCTTAATGGGA10.8547008547008548No Hit
ATAAAATATAAAAGGTGCCTCCCATTTTTACAAATGTAATATTTACAATG10.8547008547008548No Hit
TGTTAGAACAATCGATCTGTATGTGAAAATCAGCTCACTTCTTGTCAAAA10.8547008547008548No Hit
TAAGCAATCCTTTGTTGAATCCGGTCCCGGCGGGGATCACCCCACCTAGA10.8547008547008548No Hit
GCATACGCCTCTAACTCGGTTCATTCCCTAGGTACCCATTCTTGGGTTCT10.8547008547008548No Hit
CTCACGGTCTAAAATATAAGGAGTCATAAACATAAAAACAAAAAAAAAGA10.8547008547008548No Hit
GTTTTCGGCGATGTTCGGATGAGTGTCCGTGGCCGGCCGTTGCTGTGGAC10.8547008547008548No Hit
ATTCCTCAGTATTTATTTTGTCCGGTTCTAGCAAAATCTGAGTCATTCTA10.8547008547008548No Hit
GAACCCGCGCCCACGTCGTTGAGGGGGCACGATTTGCGTCATAGCGCTCT10.8547008547008548No Hit
ACCCTTTTCTTTGGTTCTGTCTTATTAACTCTTACTAATAGGCTTAACCA10.8547008547008548No Hit
ACACCATGGCTGCGAGACAGTAAGCAGCGGTGAGCGGGTGACTAAGTGCG10.8547008547008548No Hit
ATACAATATACTACACTATGTTAGTTTTGGAAAGCAGATTAAGATCGATC10.8547008547008548No Hit
TTTTTGGCATTTGGGTGGATGTGTATTCTTGGTGGCCTCTGCCCAGGGGC10.8547008547008548No Hit
AACCATTTTTTTTATATGAAAAAAGGACACAGAAGTGGTAAGCAAAAAGG10.8547008547008548No Hit
TAAATATAAATGACTTATAGACTTCTACTTCTAGAATATATTACAAAAAT10.8547008547008548No Hit
GCTATACACGGTCGGTGGGGCAGACGAATGTCCCTTTGTGTCTCCCGAGG10.8547008547008548No Hit
CTTCACCAGAGAGCAGCGTAGACTCGCATGACATTCACCCGTTTAGAGTT10.8547008547008548No Hit
GATGAGTTGCTCTGTGACAAAACTGATGGGTTGCTCACAAGAGGAGCTCC10.8547008547008548No Hit
CTAAAGTAGTGTGTTCCGAGGTTATTTAAGTCGCTCTTTCATTTAGTGAA10.8547008547008548No Hit
TAACAATAATGAAACAATCACAAAAACCAAAAAAAATACACTAGAACGTC10.8547008547008548No Hit
GAATAGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCTCGTTGCGCCC10.8547008547008548No Hit
CAAGACCATTGATAAGAAATTCAGAAGAACTAAGCATAAGTTTTGTGTCT10.8547008547008548No Hit
GTATCTAGTAAATGCATTTCCTCCGTCAAGAGGTCATCTTGATCAACGTT10.8547008547008548No Hit
CTATAGACTTAGACACAAGCAATATACCACGATGAAGAACATCAATATAC10.8547008547008548No Hit
GTCCTGACAAAGGAAATGACAACAATNGTGTGAGATTGGACCACACAAGA10.8547008547008548No Hit
TGGCATAAGTATGAAAATAAGAATGTGCAGATGGGTTAAATAAGGTTATA10.8547008547008548No Hit
ATAACCATAAAACCCATTGACCGAAAAGACCCAAAAGGAAGGAAAATCCA10.8547008547008548No Hit
GAGGGGCGGCGCGCCCGGGGGCGTGAGTGGGCAGCGCGACGCTCCGGGCG10.8547008547008548No Hit
CATTCTTGTATNGCCTCAGTAAGGTAAGACCTATTCATGAAAAGAAACTC10.8547008547008548No Hit
TTTTCGCAACTCCCTCCCCTTCAAGTTCGTTGACACGGCCCCGGCCTGTC10.8547008547008548No Hit
ACACATGCACCTGGGTAGTTTTCACGATGGGAGCACATACAGACTAGCCC10.8547008547008548No Hit
TATTCATTCACCCTTGATGAGGACACTACTAACTATGGAACATATGTGAA10.8547008547008548No Hit
GTATGTATAGAGATTTACGTCAACCAAATGTGGATTTTGGGTCATTGTGT10.8547008547008548No Hit
AATCAATACCAAGATAAGGAAAGTATACCAATGTAATAAATTCACCCACT10.8547008547008548No Hit
ACACTAACCAACCTTCGTCTCGCTTCTCAAAGCGTTCCTGGTGTAGCCCA10.8547008547008548No Hit
ATTCCCCACGGTGCAGATGTGGAGAATGTGTATGATAACCCTTGGAATAG10.8547008547008548No Hit
TCCTCCGGCTCAGCGCGAAGCGACTACCCACGTTAGACCGGGGGGCTCTC10.8547008547008548No Hit
GTATGCTATCTTAAATTATAAATGAATATATGCAAAAACCAAAGACATAA10.8547008547008548No Hit
AATATATCTGATGTTTTCTTGCGAAAAGCATGTCTCTCGGTTAGCACCAT10.8547008547008548No Hit
ATTCATATGGGTGGTTTGCTCCATGTGTGGGGCGTTTTGTGGGAATCAGG10.8547008547008548No Hit
AAAAAAAATCTCTATAATGACAAATAAATTAAAAAACTCCAACAATTACA10.8547008547008548No Hit
AATCTAAAAAAAAAACAAACACTCATCCCGAACAAAGACAACCGCACCAA10.8547008547008548No Hit
AAGTTATCAACCTGGGGCTAGATTGACGAAGGTGAAATAGTAGCTCTCGC10.8547008547008548No Hit
ACTTAGTAGAAATACAAGACAGCCACACCGAAACGTCACGAAATCCCCAG10.8547008547008548No Hit
CCAGTAGGATAAAAAATAAAAAATTAAAAAAAAAACCTAAAATAAAAGAA10.8547008547008548No Hit
TATATATTCTTTTTTGAATTCGTTATGACCCGTTAGCCGTGCGTCACAGC10.8547008547008548No Hit
CACCTGGCGGATATTGGCAGGAAAATTCCCAAGATTCAACCCAAGATCAG10.8547008547008548No Hit
GAGGAGATTTGAAATGTAATGAAGCACAAAACCGGCGGTAAAATCAATCA10.8547008547008548No Hit
GCTTTAACTTCACAGCCTTTGTAAGTTTGCCAGTTGAATCATGCGAGGGT10.8547008547008548No Hit
GTCTACTATCCAGCGAAACCACAGCCACGGGAACGGGCTTGGCTGAATCC10.8547008547008548No Hit
AGTGGGGATTCGCGATGGCGGGTTCAATGGCCGGCGTTCTCCGGTGGTGC10.8547008547008548No Hit
CCCTACTTTTAATCAATAATACTCGGTCCCCATATATTCAAATTGACTGA10.8547008547008548No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)