FastQCFastQC Report
Tue 23 Aug 2022
HNCMMDSX3_n02_chi_017.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCMMDSX3_n02_chi_017.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTACATTGAATGTAGCTCAAAAAATAAACAGGTACACTTGTTCATGTGT11.0309278350515463No Hit
GTATAGTTCTCTGCAACATTTACCTTCCTTTTTCTATACATTCACAGTAA11.0309278350515463No Hit
GGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0309278350515463No Hit
AGGGGGGGGTGGGGTGGGTGGGGCGCCTTGGGGGGTGGGGCGGGGTGGGG11.0309278350515463No Hit
GTAATGTGTGTTTCACCATTATAGTAGAGTAGTAGTATTTTGTTTTTGTG11.0309278350515463No Hit
GGGGGGTGGGGGGGGGGGGGTGGGGCGGGGGGGGGGGGGGGGGGGGGGGG11.0309278350515463No Hit
GTTAGGGNGAGGGGGGGTGTTGGTCCGGGGCGTGGGGGGTGGGTAGGGTG11.0309278350515463No Hit
GGTGCGGGGCGGGTGGGTGGTTGGTTGGTGGGTGGGGGTGGGGTGNGGGG11.0309278350515463No Hit
GCACCCCCCGCTGCGGGAGACCCCCGGCGCGCCGAGCGCCCCCCGGGCGC11.0309278350515463No Hit
CTTCAAGCTATTCTAAAATAAATCAATTAGTTAACTAATGCAAAGATTGC11.0309278350515463No Hit
CATATGGACTTTGGCTACACCATGAAAGCTTTGAGAAGCAAGAAGAAGGT11.0309278350515463No Hit
GTTGGGTGGGGGGGTGGGGCGCGGGGGGGGGGGGGGGGGGGGGGGGGGTG11.0309278350515463No Hit
AATCAATTCACTGTAATATCAATCATGGTTGACCACTGTAAACATCTTAA11.0309278350515463No Hit
GGGGGGGGGGGGGGGGGGGGTGGGGCCGGCCGGGGGGGGGGGCGGGGGGG11.0309278350515463No Hit
AAAAAAATAAAATTAAAAAAAAAAAAAACAAAAGTGGAAATAAAAAATTT11.0309278350515463No Hit
ATCCGCGGGGGGGGTGGGGTGGGGGGTGGGTGGGGTGGGGGGTTGGGGGG11.0309278350515463No Hit
ATAATAAGTGACTAGAAGTAAACATTTATCATAAAAAAGGGATTAGAAGA11.0309278350515463No Hit
TTTTATGGCTGTGGCATCGGGGGCGGCGTTGTGATCGTGAATGTGGCTGT11.0309278350515463No Hit
GTGGAAGTTAGTGATGTGCCTGGTGTGTGTCTATTGCGAGTGTGTGGATA11.0309278350515463No Hit
GATCTTAAAGGCGTAAGAATTGTATCCTTGTTAGAAGACACAAAGCTAAA11.0309278350515463No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGCGGGGGGGGGCGGGGGG11.0309278350515463No Hit
CTCTCATTCTTATATCAGACATGATTGCTATTAAGTACAACAGTGGGTCT11.0309278350515463No Hit
GGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGG11.0309278350515463No Hit
AGGAAGTTATACTCGTCATGATGCAGAAGCAGCAGTATCTGAAAGGGGTA11.0309278350515463No Hit
CTTGTTCGACAATATATTTTGATTCTGCCCTTCTAAACGGGACGTCAGCT11.0309278350515463No Hit
GTATCAAGGAGAAGATATAAGTAGATGTTGACAAAGCTAACCTCGGGTTA11.0309278350515463No Hit
GGGTTGTTGTGNATATTCTGTTCCGTGGGTGTGGGGTGCGGGTGATTGTT11.0309278350515463No Hit
GAGTTATACAATAACTAAGGCAACGGTATGGTTGATTTAAGGATGGTCGG11.0309278350515463No Hit
GTCTCGGACTGTCTACACAAACAGGATATGGGTTTTCAATTCAGGGTTTT11.0309278350515463No Hit
CTTCTCTTCTAAAAAATAACAAAAAATCAAATCGCCATAATACTCAGCTA11.0309278350515463No Hit
GTCCCACCCGCCATGTAGGGATACCCCATCTAGTCTTAACAAGCTTTGAT11.0309278350515463No Hit
TCGGGGGTGTTATGGGGGGTGAGTTTTGTGGATGAGGATTAGGTTGGTTT11.0309278350515463No Hit
CGTACACATGATATCAAGTCATATTCGACTCCAAAACACTAACCAAGCTT11.0309278350515463No Hit
GTAACGGAGCAAACCGTTCCGCAGATCGATTCGGGGCGTGGACCGACGCG11.0309278350515463No Hit
GGGGGCGGGGTTGGGGGGGGGGTGCGCTGGGGTCCGGGGGTGTGGGGTGG11.0309278350515463No Hit
CCACTGCTCGATTTTGTAATGCGGTTTTGGAGCAGGTGACACGTCGTTGG11.0309278350515463No Hit
GGGGGTGGGGGCGGGGGGGGGGGGAGGGGGTGGGGGGTCGTGGGGCGGGT11.0309278350515463No Hit
ACAATGGACAGTTTCCCCTTTTGGTTAGTGATATCTCTTCATCCAATACT11.0309278350515463No Hit
GTGTTTACCGTCTGGAACGGCTACCAACGAGAATCAAGATCAGTGCATCA11.0309278350515463No Hit
GGGGTGAATTTTAGTTGTTAAATGAGGGATATTTTTGTTTTATTATATGA11.0309278350515463No Hit
ATGTTGTTGCGTGGGTCGAAAGGTGGTTGAGATATTTCTGTTGTGGTCCA11.0309278350515463No Hit
CCGTTAGGGTCTTGAGCCGAGGCAAACACTAGCACTCCGCCATATCCGTT11.0309278350515463No Hit
GGGAGTCGTCCGGGGTCTGGACCCAGCAAGAAAACTAACGACGTCAAGAC11.0309278350515463No Hit
CGTGTGTCCTTGATCCAAAGGGATTCCGCATGGTAGAGTGTTATATTAGC11.0309278350515463No Hit
GGTGGGTGGGGGGGNGGGGGTGGGGTGCGGGGGGGGGGGGCTGGGGTTGG11.0309278350515463No Hit
CTGTTTTGAACCAAAAAAGCAGCAAAGTAAATAACAAAGTTGTAAACAAG11.0309278350515463No Hit
GTTAATATTAGTTGTGCCCTTGTTAGCGTGGAACCAAGGCTAGTTAACGT11.0309278350515463No Hit
ATGATACACATGACATCAAGTCATATTCGACTTTAAAACACTAAACAACC11.0309278350515463No Hit
GTGTGACGGGGGGGGGGTGTGGGGGGGGGGCGGCGGGGGGGGGGGGGGGG11.0309278350515463No Hit
CCCATCTTTCTTTCTTACCAACAAAACAGGACTAGAGAAGGGACTAATAC11.0309278350515463No Hit
GATGGGGATAGATCATTGCACTTGTTGGTCTTCAACGAGGAATTCCTAGT11.0309278350515463No Hit
GTGGTGATCGGGGCTGGGCTTGCATGCGGCCCGGTGGGGGTGCCGCGGAG11.0309278350515463No Hit
GGTGGGGCGGGGGGCGGGGTGGGGGGTTGTCGGGNGGGGGTGGGGGCGGG11.0309278350515463No Hit
ATGGGGGGGGGGTGGGTGGGGGGGGGGGGGGGGCGGGGGGTGGGGGTGGG11.0309278350515463No Hit
TCCTGCCATTCNCAGTTTCGGTTTGCTCGCGCGCCATCGGGTCGAGTGGG11.0309278350515463No Hit
TGGTTGTGAGCGTGGGGCATTGGGAGGCTGTCGTTGTGGGCGGGGTTTGC11.0309278350515463No Hit
CGTTTTATTAGNGGGGTGGTTGGCGGTGTTGAGGAGGGGGCATGGTGGGG11.0309278350515463No Hit
GCGATTTTCATGTGGTACAGGTCCTTCAAAATGAGGCCCGACTGCGGAGT11.0309278350515463No Hit
GCTCTGGGTTATCGTTGACTGGGGTCATGTGACGTTGTGCTGCTGCAGAG11.0309278350515463No Hit
CCATGTTCTGGTCGTCACATGTGGTGGGAGTGTCTTCCTCTTGGGCTGAT11.0309278350515463No Hit
CGCCGTATGTGTCTATCTTTGGAGATCACTACTTGTCATTTGTCTGAAAT11.0309278350515463No Hit
AGATTTGGTTGTTACTCTTACAATCTCCATCGCACTAGGTGATTAGCAAA11.0309278350515463No Hit
GGTGGGGGGGGGTGGGGGGGGCGGGGGTGGGCGGGGGGGGCGGGGGGGGT11.0309278350515463No Hit
TCATTGGACGCGGGGAGGGGGACTCTCCGCCACCGGGGGGGGCGTGGGCG11.0309278350515463No Hit
GTGGCCTCGCACCATAACTCGGGTCGAATCCATCATCCACCACTCTCTCT11.0309278350515463No Hit
GAATTATAGTTTTTGATCCCCATATCAAACTAATTCAACTAAAACGACAA11.0309278350515463No Hit
GTCTCTGGGCGTGTGGGGGGGGGGGGTGGGTGGGGGNGGGGGGGGGGGGG11.0309278350515463No Hit
GGCTGGGGGGGGTGGGGTTGGGGGGGGGGTGGGGGGTGGGGGGGGGGGGG11.0309278350515463No Hit
CTCTCACTCTCTCTCTTACCTCTTCTCATTTGTTCTTTCTCCTTCTAAAT11.0309278350515463No Hit
ATGTTGGCTTGGTGGGGTGGGGGGGGAGGGTTCGGGGGGGGTGGGGCGGG11.0309278350515463No Hit
GTGTTGTTATGCGGGACACAGGGTGAGTCGGTGGCGCAGGAAGCGCCGCC11.0309278350515463No Hit
GATCACCAACAGAAGCCTCTATACAATCTTTCTAGACATTTTCCTCACCA11.0309278350515463No Hit
ATGACGGCTGAGTTTGTTTATGTTATGGCTGAGTTTCTGTTTTGATATAG11.0309278350515463No Hit
AAAAAAATCTGAAAAAATTTAGAAAAAACTAGAGTTGACTTAAGAAAATT11.0309278350515463No Hit
GCTTCTAATAATTCTGTCTATTCTAATTTGTTGATTCACTTATCATTAAT11.0309278350515463No Hit
CACCTATACCGTCATTAGGGAATTGGATCGCAAGGTTTGGCCCACTAAAA11.0309278350515463No Hit
CTTTGATACACTGGCTTCCATCAAAGATTTGTGTTCTTGCATCCGATAAG11.0309278350515463No Hit
AGATGAGCGTATGTATGGCGGTTCCTGTTGCTTCCCGAATGCGTAGCCGC11.0309278350515463No Hit
ATATATGCATCAGTCTCTCATTGTATAGCAAATTTATCGTGGGTGGTATA11.0309278350515463No Hit
GGGTGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.0309278350515463No Hit
GGTGTATGGGGGGTTTGGTTATGTTGATTAGGTGGGGTGGGGGGTGCTGG11.0309278350515463No Hit
GGCTTGTTGGCCTGTGGGGCTCGGTCGCCGGGGGGCTAGGTGGGGCGGGC11.0309278350515463No Hit
CCTTTACGGGCTCCAGAGCAAGAAATAATATGTTCTGTTAAAGACAGTCC11.0309278350515463No Hit
GCCCTTTCTTCCGGAGCGGGGTGCTGGTTGGCTCCCCGGCTGGGCGTGGG11.0309278350515463No Hit
CGTTGATACACTGGCTTCCATCAAAGATTTGTGTTCTTGCATCCGATAAG11.0309278350515463No Hit
ATGCATACCAAAGGTAAATTGTCCAAGGAATTCGAGACACTTCAAAACTA11.0309278350515463No Hit
CCTGTACAAACATCTAATAGTGTCAAAAGATCCTCCTAGCATCACCAGTC11.0309278350515463No Hit
ACTCCACTCATGTCTAGTTCATTATCTCTTTCAAACTTGTGTTTCCTTTT11.0309278350515463No Hit
GTTTTGGTGTGAGCGTGGGGTGTGGTGTTGGGGGGGGTGGTCGCGTTGTT11.0309278350515463No Hit
CTACTAGATGGNTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAA11.0309278350515463No Hit
GTAGACAGGTANAGGGTACAAGCAATAAATTAGGCATTGCAGTACAATAA11.0309278350515463No Hit
CTAGGTGGTCGGGGTGGGTGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGG11.0309278350515463No Hit
GTTTAGTTGTCCAATGANATATAAAAGAAAAAAGTACATATTTTTCCCAT11.0309278350515463No Hit
TCTTTGAACATAGTGTTATTAATCTGTACTCATTTCTTTTGGTATGGGTT11.0309278350515463No Hit
AATTCTGGAGCCAAATAGCCTCTCTCGCCGCTTCTATCCGAGCCCTAATG11.0309278350515463No Hit
GGGGGGGGCCGNGGGGGGGGGGCGGGGGGGGGGGGGTGGGGGGGGGGGCG11.0309278350515463No Hit
ATGCCTCGTCGTCTGGTGGGGCGTGTGGGGGCGGGTGGGGGGTCGGTTGG11.0309278350515463No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)