FastQCFastQC Report
Tue 23 Aug 2022
HNCMMDSX3_n02_chi_013.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCMMDSX3_n02_chi_013.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences145
Sequences flagged as poor quality0
Sequence length151
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTACTATACTAATCAAAATATAATACCTTTAAAGCCGTCTGATGAGTTC10.6896551724137931No Hit
CAACCCAGTGAATCCAGAAAGAGGGCTCAGACAGTCAATCCTAACCAAGG10.6896551724137931No Hit
ACATTATAGTGCTCTAAGCAGTTGAGGGAGCCGATGGATAGGAGTAGAGT10.6896551724137931No Hit
AATCCAAATTACTTGTTCTATCTAAATGTTTAAGNACCTTCTCNTCTTTA10.6896551724137931No Hit
AATCAATGTGGTGTGGAGGGTTCGGTGAGATCGGGTTCGTCTCGGAGAAT10.6896551724137931No Hit
TCCTAATGCCGCGAGGACTTCTCTTCTCACTCTTAGCCAAGTGACAGGGA10.6896551724137931No Hit
GCTCAATCTCCTCGAAGATCTCGCAGACTCAGCATACATAGTGGTAAAGC10.6896551724137931No Hit
GGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.6896551724137931No Hit
CAACCACCGCTGATGATTCTTCGTCTNCTTCAGGTCAAGGTAAGATACAA10.6896551724137931No Hit
GTGTACGAATTACTAGTTAATTGTATACCACCAGAAGTCAGTCTAAAGGT10.6896551724137931No Hit
GTTTAGCCAAAGTCCATATGAGTCTTTGACTTTGTGTCTTCTAACAAGGA10.6896551724137931No Hit
CAGTTAGATATACATAAACAAGAAGAGATTACAGAAATTGAAGATAACCA10.6896551724137931No Hit
ATTATAGGGATGAATACTTGATAAAGATGGGTTATGAGCAATGTCACCTT10.6896551724137931No Hit
ATACTGATAACTCTCGGATCGAGTATTAGAACGGCAAAATCCATTAGATA10.6896551724137931No Hit
ATCTAGCTTTACCGTTTTTTCCAACTGGTCGTTTTAATCTGTGGTGAAGT10.6896551724137931No Hit
ATCTTCAGTGGTTGAAATGGCGTGCAGATCGGGCTAGTGACCCGGTTGCG10.6896551724137931No Hit
GAGTACCAATATATACTTTAGTTTCTATCAAGGAAAGGAAATATAAATAG10.6896551724137931No Hit
GGGCACTGGCACACTGCCTTCGAAGTAGTACTAGAAATACAAATGCCGTT10.6896551724137931No Hit
AAAAAACACATAATCGTAATTCAAGAAAGCACCCACAACAGGCAAAACCC10.6896551724137931No Hit
TCTTTTACCTGTTACTTGAGGTTTATTGAACCAATTTCACCGTAGAATAA10.6896551724137931No Hit
ATACTCAATAATACACAATACATCAAGTCATATTCAACTCCAAAACACTA10.6896551724137931No Hit
ACATCATGCGACGGGGGTGGGGTTGCGTTATCTGGGGGGGGGCGCGTCAG10.6896551724137931No Hit
AATACAAAGAAACACGCCCAAACACACTCAAGAAAATTCTGAACAGATGA10.6896551724137931No Hit
ATGTTAAAGTGGTGTGGGCCAGTAGGAGTAATAGGGACCCAGTCCGAGAA10.6896551724137931No Hit
GTAATATCTCGTGGTGGCTGAGAACGGACTTAAGCTAGAGAAAGGATCAG10.6896551724137931No Hit
AAATCAAATCTTATCCTCTAATTGAACATTCTTCTTAGGTGGTCTCACAT10.6896551724137931No Hit
CACCTATTGTGAATGAACAAAATGAATCTAAAAATCGAAGGCTCAGAAAA10.6896551724137931No Hit
CTGATCCAATTTGCGTACCTCTACAGGATATACCTCAACAGACAACTGAC10.6896551724137931No Hit
AATCTCTACTAATTAAACGGAAATTAGATGGTTCACTGTTAGTGTATATA10.6896551724137931No Hit
GAACGTATTGAGTTGACCCCATAAGCGGGATCACCACCCCATAGCATGTT10.6896551724137931No Hit
AAGGCGTACAACCACTACATCACCTCCTTGCACGTTGCTTCAATCGTGGG10.6896551724137931No Hit
CTATACGCTGACTATTTGCAAATGGCATGAAGTGCGCCACTCCTGGTTCG10.6896551724137931No Hit
AAATCAATGTAAGAACTTATAAAAAATTAAGAACACACCAAAGTGTTCAA10.6896551724137931No Hit
GTCACATTAACTTGTTATTCTGTTTAGTATGCGAACAAGAATTTGAAATG10.6896551724137931No Hit
TCGCATCGCCTCTGTGCTGGCGTCCCAGCTGTCCAAGTTCGGCGCTATCC10.6896551724137931No Hit
ATCATACACATGATATCAAGTCATATTCGACTCCAAAACACTAACCAACC10.6896551724137931No Hit
GATTAGGGGGACTCTTGGGAATATTAAGACCATCTCCAATGGCTAAGAAG10.6896551724137931No Hit
TTATTGGAATTAGTGATTTCTCTCCTCATTGGAAGGGTTCAGAGTGGCGC10.6896551724137931No Hit
ATCTATGATAGCAACGTCCCCCGGTCTCCGGCGCGGCGGGGGAGCGGCTG10.6896551724137931No Hit
ATGATAACCGCACAAATAAGGATCAGGATCTCATTATTAACCACCTCACA10.6896551724137931No Hit
GTAAGAGAACATCAATTATTTCTTCAGGTTTGGAAAATGCATCCTAATAA10.6896551724137931No Hit
GATTGATAGTTTCTTCGACTGAGTGCTTTCCTGGGAGTTTTGTGGCGCGG10.6896551724137931No Hit
CGTCCTTCAAGATGCTAAGACCATTCCTCTTCCCGTCGATGGACCAGAGA10.6896551724137931No Hit
CTCAATTAATAGATACCATTATATCAAAATCACAACATAGTCCCTGTCTA10.6896551724137931No Hit
AATTAAGAGAGTAGCTTCTGCTTCAAATCTCTTAGCGTGTGTACCTTGTC10.6896551724137931No Hit
GGGTCGGGGTGTGTGGGCCCTCGTGCGGGGAGCTCGGTGGTGCGCCCCGG10.6896551724137931No Hit
CGTTTTCTGCCNACACCAAGGAGCTTGGTCAACTATTCTATCAATAGATA10.6896551724137931No Hit
TTTTCGTACTTTTCCACATGAAGCTCATGTTGTAAGATTGTTTTTATTGC10.6896551724137931No Hit
CTATAACATAGCCCCGACACCAGCATTAATTTAATGTCAAATATGACGTC10.6896551724137931No Hit
AAACCACTTAAATCCTTTCTTAAAGTAATATTTCTATATTCAGAAGGGGA10.6896551724137931No Hit
GTGCCTATGTGTGAATATAAATGACATCTACTCGTGAGATCTCATCTGCT10.6896551724137931No Hit
GGTGTGGGTTTTATCCGCGAGCATCTGGCTGGGCGGGGGCGAGGCGGGGT10.6896551724137931No Hit
AATAAACAAATCACCTCCATTCAAATTGTTTGAATAATTAATGATTAAAA10.6896551724137931No Hit
CAATTATACACATGACATCATTTCATATTCGACTCCAAAACACTAACCAA10.6896551724137931No Hit
TGTTGGAACAGTGAGTGAAATTTCTGTGAAGAATGCAGAATGACCAGTCA10.6896551724137931No Hit
AAGTCAGGGGACGTGGTTCGCCTACTGCTCTGCCGCGTTTTCCTGGGAAC10.6896551724137931No Hit
ATGATCACCGGCTCGTCGCGCGGTGGCCTGCGCTTGAGGGGTCCAGCCTG10.6896551724137931No Hit
ATCTCACATCTGATTAGTCATGATAAACCAAACACCAAAATTTTAACATA10.6896551724137931No Hit
ATTACGGTGTGTGCGTTTCTCGTGTGTCTAAGATATGTGTCTTAGTATTA10.6896551724137931No Hit
TCTGTCTATCTGTTGAAGCTTGGAGGCGGGAATTCATGGGGGAACGGAGG10.6896551724137931No Hit
CCACATATTATNTTTTTCATGTATGTGTATGGTTTGCGTTAATGGATACT10.6896551724137931No Hit
AGCAGGAACAGTTGGATAAGACAGGCTAGCGGGGCGTGAGTTCGAGGACG10.6896551724137931No Hit
AGTCACGAAAGTATGGTTTTTGGGTCAGTTTGTGCTGAGCGTTTAGCAGT10.6896551724137931No Hit
CCTTGTTCAGTGCCATTCGTGGTCCTCAAGACAGCTTGCTGGCAGGGGGG10.6896551724137931No Hit
ATATTCATTTGGTGGTATTGAATGTGAGTTTTGATCAAGTGGCTGGCAAG10.6896551724137931No Hit
ATACTGTTAATACCTATGAAGAATATAAAACAAGTTAACAATACAGCATC10.6896551724137931No Hit
TGGAGTATCAGTAGATTTATGGAGTGTGGGATGTGTTTTTGCTGAGATTC10.6896551724137931No Hit
GGCCAGCCTGTTGGGCCGGTCTTTAGGGTTTGGGCGCGCAGCGTGTCAGG10.6896551724137931No Hit
TTTTAGGAGTTATGATTCAAATTAGGCATTGGTTGGGGGGGAAAGTAGAG10.6896551724137931No Hit
TTCTAAGATAGAGTATCTCTTTAATGGACAGCCAATCCTCTGGCCGGGGT10.6896551724137931No Hit
GTCTTACGGTTGGAAGTGGAATGTTGACACTTGGCAGTTTTATTTGTATT10.6896551724137931No Hit
GGGGCCAGTCCAGAAGACCACCCTGCCCGGTCGCGGGGGTGTAGGGAGGC10.6896551724137931No Hit
CCCAGGTAGATCAACACTTGCGATAGAGACATTTAGACATCTAAACGATA10.6896551724137931No Hit
CAATATTATCAATATTTGTATTGCCTCATCATTAGATGGCAACCAAAGAA10.6896551724137931No Hit
GAATAGGGTTTTGAGTCTGTTTACAAATATCCAAATAGGTAAATTACAGT10.6896551724137931No Hit
ATATCTACAGAAAAATTCTCCAAAAAACAGTATAGCACTAACTCTCATAC10.6896551724137931No Hit
ATAAAAAACATGAAATAAATACATAATCATAAACAAAACACAAACCAACA10.6896551724137931No Hit
ATGCAGGTAAGAATCCGCCAAATTTGGAAGATAGGCCAACTCTAATTTTA10.6896551724137931No Hit
ACCCTGAAGTGTGATAAGTGTGTATTTTGCATGTTTTGAGCATCCATTTG10.6896551724137931No Hit
ACACCACGTTGGTGTCGGTGGGACAGCCATATCTCATTACATCTCTGAGG10.6896551724137931No Hit
GTCGGGGGCATTGGCGGATGTCCTCCACCTAGTCCTCCGGATACCACCGG10.6896551724137931No Hit
GTCACTGACGTTATCCTTTGTTGGATNCTTGCAAAGAAGGGGGAGTGGGT10.6896551724137931No Hit
CGTTATAAGATTCTCTTAACAATACAACGGAGCTATTAGATAGATAGGAG10.6896551724137931No Hit
TTAGAAAAACTTATGCAACTTCTCCTATTCATAATGACTTTATGAAACTT10.6896551724137931No Hit
GTAGTATAGGGAGTTCCCTATTTTGAGAATCCTAGACTGGTTGTCTTGTA10.6896551724137931No Hit
ATAGAGTACTGGATATGCGATGACATTATAGGTGGGTTTTAAGGTATTGA10.6896551724137931No Hit
ATTTTGTGTCATGCAAAAAAAAGGGGGAATTCTACTAGCAAATTTAATAT10.6896551724137931No Hit
AATCTGGATAGNTCAACCATAATCTATTTCTGAATATATGGAATTATTTA10.6896551724137931No Hit
AGGTTGATGAACGTAGAGGTCGGGCGGCCATATTACAACCTCACTCAGAG10.6896551724137931No Hit
TGTTAGACATTTGGGGTTCGTTTTCTTGGGTCACAGGCAGGCGTAGGGCG10.6896551724137931No Hit
ATTTCGTATTTTACTATGTTCTACTCGCTGTATTCCTCTATCCGTAGAGT10.6896551724137931No Hit
AACCCGAGCTCATACGCGACCCGCCAGTCGAGTGACGTTGGAGCCCGGCG10.6896551724137931No Hit
GGCTTTCGGGGTGAGGGTGGCGGGTGTGGGGGTCGGGGTTCGGGGTGCTT10.6896551724137931No Hit
GACTAGGTGCGAGTGTTGTGGGAGTTGGGTTGGTATCGGGGAGGTTGTGT10.6896551724137931No Hit
TGATTGTACTCCGAGGTACTTCTTAAGTTCTTCCTCTATTTGCTCTTTAC10.6896551724137931No Hit
AACTACCGTGGCCAATGTGCGCTTGTTACGCCTTAGGCCATATGGCGACG10.6896551724137931No Hit
GAAATCTCCTAGCCATAGTGATAAGCAAAGCTACTCAACTTTGAATCGTC10.6896551724137931No Hit
AGGATAATCTTACTACAGGACCTAAAGTAAAAGAAAAGGCACTTCCAAAG10.6896551724137931No Hit
ATATATCTGTGATCTATCAATACATATCTAAGTGTATTATGCCAGAGATA10.6896551724137931No Hit
GAATAGCTCTAACAAAAACAGAAAGCTTTTGATGAATAAAGTGGAGAAGG10.6896551724137931No Hit
GTGTCAAATTCTTCACTGGCGTCGAGGTCATAAGGAAGAATGTCGATCGC10.6896551724137931No Hit
GTTCTATCTCATTCTGGGCTTGAACTAGCGGTCACTGACAAACTAAAATA10.6896551724137931No Hit
TCAATATATTGTACCTGAAGGAAGCGAGAAAAAAATGGGAAAGCAGAAAC10.6896551724137931No Hit
GATGTGTATTTCGAGGCACACATATGACAACAGAGTCCGGATGTGATTCC10.6896551724137931No Hit
GGCCAAGTCTTGGAACTTAATTTAAAAAAGCCTAAATAAGACTCTATAAA10.6896551724137931No Hit
ATCAAACCCTCGTCGACTCACAGTAATAGAGAATGTGAATCACGTTTTAA10.6896551724137931No Hit
GCTCCCTTCTTTTTGGGTGTGAATCTGTGTCAATACTAAATACCCAAGAA10.6896551724137931No Hit
CTAATAATGGTATCCATCATCAAACCATTGTTAGTAAGACAGAACAACTC10.6896551724137931No Hit
CCACAATAGGATATAATATCCAAGTTTGTAGTAAAATAGAACCCCTGTTT10.6896551724137931No Hit
GCCAACCACCCGGGTCGTACTTCTGTCCATCTTGTACTTCAGTGGGTTTG10.6896551724137931No Hit
AACCGCCCGGTATACTTGGACCTGGGTCCGCCATGACCTGATCCCTTGGA10.6896551724137931No Hit
AAAGAAAGACGTGGCCAACAAAAAGATAAGCTACGCATGACTTTTTAATC10.6896551724137931No Hit
GGTGGGGGGCCTTGCGGGGTGTGGTGTGGTTGGGGTTGTGCGTTGGGTTT10.6896551724137931No Hit
TCTCAAGTTTTGCAGCGGCTAGTAGGCCGATCTCGGCGACAGCTAGTCTT10.6896551724137931No Hit
GAACAGAGACAACCTATGCCAGAGCGAGAATGGTTATGAGACCCGTACAT10.6896551724137931No Hit
AGAGTGACTCGGAGGGTAATAGAGGTAAGAAGGAAGGGGGAAGGTCAGAG10.6896551724137931No Hit
AAAAAGTGGCTGGAAAAAATCTTCAATAATACAACATAAAATAAATAAAA10.6896551724137931No Hit
GAATGTAAAGCAAACAACCCGCGATCCATACAACGATGTCTTTCCCGTAG10.6896551724137931No Hit
CACCAATCTCAATCAGTATAAAATTATTTTCAAATCACGATCGAATAATT10.6896551724137931No Hit
AATTTAGGCTATATATCTGGTTAAAAAATAACCTCCATACAAGTAAGGCA10.6896551724137931No Hit
GCCTGGCAATCTGCAATGTGGTGGGGATCACGGGGCGGGCCTTCCGGGTG10.6896551724137931No Hit
TATCTACCTAATGAACTCCAATAGCTAGAAAGAAGGAAAACTACCCCGGA10.6896551724137931No Hit
GGCTGTTAAACAGAAAAGATAACTCTTCCCGAGCCACCCGCCGACGACTC10.6896551724137931No Hit
TTGTTATTCTTTTACCGAGCAAACTTAACTGATCAAGCATTATCTCAGCA10.6896551724137931No Hit
TATTTGAACCGGCGCTGAATGTGTGTCTGTTGGTTTTCGGCGCCGGTGGC10.6896551724137931No Hit
ATATTAATACAAAATGGTATAGTACAGGTGAAACTCTTAAATTAACAATC10.6896551724137931No Hit
GCAGTATACTACGCCTTCTAATTCTTTAAGAGGGTTATCTAAATGATTCG10.6896551724137931No Hit
CTTTGCAGGTAGAGAATTGGGTTTAAGTGAGTTTCTGTTTTTGTTTGTTA10.6896551724137931No Hit
GGGGGTCGGTCCGGGGGGAGAAGTTATAGTCACCAGTCCGGTCGTTGTGT10.6896551724137931No Hit
GGTTTTGGTATTGGGCGTCCGATGAGAGTGGTACGAAGTACTTCTTGGCG10.6896551724137931No Hit
AACCACAACGGGGGGATAAAATCATTGTCGTGGCGGCCAAGCTTTTTGCG10.6896551724137931No Hit
GTCAAGCATACCTTGCTAGATCAATCTCATTCAACGCTAGCAAGTAGAAA10.6896551724137931No Hit
CCATTAGTTTCTTAAAATTTGACTCTAAAGACAAATTATAAAGTAAGATT10.6896551724137931No Hit
TGGGGGGGGGGGAGGCGGAGGTGTGGAGGCGTGGGGTGGGCGAGGGGGGG10.6896551724137931No Hit
GTGCCTACATTATCAATAAAAAGTCCTCCTTAGTTTACTAAATTTGATAT10.6896551724137931No Hit
CAATCATACACATGACAACAAGTCATATTCGACTCGAAAACACTAACCAA10.6896551724137931No Hit
GATATATTCTTTAACTTGGATTGAAACTAAAGGAACATCTCTATGTATAT10.6896551724137931No Hit
GTTTTATGATTAAATCCTTGTGAAAATTTATTACGTTTCGGCTTATTAAC10.6896551724137931No Hit
CTCGTAGAGCGCATATTTCTCTCGAGGAGGTGTGTCTCTTCTAGTTCGAC10.6896551724137931No Hit
CTTCTTAAGAATAAAACAAACAAATAAAACATTTTTCTTTAGTATTATTA10.6896551724137931No Hit
ATATGCACCGCCTCCGGGCGTAGCGACACCTCCGGTTAACATCGCTGGAG10.6896551724137931No Hit
ATCATGTGTAATGACTAATTTTCTTATATGTCATATTTCTAGCTGTCCTT10.6896551724137931No Hit
AACCTGTCTCACGTCGGTCTATCCCCCGCTCTCGTTCGCGCGTGGGGGGT10.6896551724137931No Hit
ATCAAACACATCACATCAAGTCATATTCGACTCCAAAACACTAACATACG10.6896551724137931No Hit
CAGGGGGGTTGAGCGGGCGGCTGGTTAGTCTCGTTTCCTCTTGCGGGCGG10.6896551724137931No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)