FastQCFastQC Report
Tue 23 Aug 2022
HNCMMDSX3_n02_chi_011.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCMMDSX3_n02_chi_011.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences170
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATACTATACAATTCGTATCTCGACTGTACAATCTAAGATTCTTGTAAATC31.7647058823529411No Hit
ATACCAGACTGCAACATCCTACTAATCTCAAGTAACCTACTATTCAAAGC31.7647058823529411No Hit
GTTTGCTTACTGGCTTCATATAATTCTGAAAACACCAGTTTTCTCGAAGC21.1764705882352942No Hit
TTCATCGTCCTGGTCGACGATTCCTCGGACCCGGTCGATGAAGTCTCGGA21.1764705882352942No Hit
AGGCTATTCAAAACCGGGCAGAAATGGAATCTCTTCAGAAGTCCTTAAGT21.1764705882352942No Hit
ATATCATGAGGATTTAGAGTAGTTAGAGATTTGGTTTGGCATCTACAAAG21.1764705882352942No Hit
CTTCCCTAAAGGTTCTTACTTTCGAGACAATCTCCGAGACCTCCTAGGAG21.1764705882352942No Hit
GTATAAGAACTTAAACAGCAACACGATCTTATAAGCCTAGGTAGTGTTTC21.1764705882352942No Hit
CAAAGCCAAAGACTCATATGGACTTTGGCTACACCATGAAAGCTTTGAGA21.1764705882352942No Hit
CCATTTACCTGCTGCCCATAGGCTCTTTTGTGAAATGGTTGGTCAAGGTT21.1764705882352942No Hit
GTATAAGAACTTAAACAGCAACACGATCTTATAAGCCTAAGTAGTGTTTC21.1764705882352942No Hit
GTGTCAAGGTAGTGACCTCGTCCATCCCCATAAAGCCTCCAGAGTTTGCC21.1764705882352942No Hit
CGCCAGATATGCTCATCAGAAGTTGATTGGAGCTATGCAGAGCCAACGGA21.1764705882352942No Hit
CTTCTGCAAAGCCCTTTTATGCGATTATCCACAGGGTTACAGGGAGCATC21.1764705882352942No Hit
AGAATACACAAAGCCAAAGACTCATATGGACTTTGGCTACACCATGAAAG21.1764705882352942No Hit
TCATCAAAGAGGACATTGACGTGGGGCAACTTGCAAGTTCTTATAAGTCT21.1764705882352942No Hit
CTATGATACAGATGGTCTCATCAAGAGGTTTGGTTAGACGAAAACCATAG21.1764705882352942No Hit
GTCATGGGCAGGGGGTGCTGTGGCTCTGGGAAGAACTGTACTCCCTGTCT21.1764705882352942No Hit
GAATTGTGAATCTTGATTGCTTTGTTTTACTTGATAGATTTATGCAATTT21.1764705882352942No Hit
CTTATGTTGATTATAGTCTTACCAGAAACTTGCATGTTGTTAAAGGTCTC21.1764705882352942No Hit
GGCCAGGCAGNTCAATTCTTTGAATAGAAATGCAGTCAATGGAAGTTGCG21.1764705882352942No Hit
GGCGTACGTTTGGAGAACGAATGGACCAATAAGCCAAGAGCTTGATTCGG21.1764705882352942No Hit
GTGTGATAATGACATAAGCCTTCTCCGGTTTAGCTCATCACCGTTGACAA21.1764705882352942No Hit
TAATAATATTTCGAATATTCGATTACTTATTTACTTTAAAAAAATGATAA21.1764705882352942No Hit
ATTTTAGACACTTCTGCAAGCACCGGAAATGAAGAAGATGAATCTGCGCT10.5882352941176471No Hit
ATTGTTGTCAGGTTTTCACCATCTATGTATTAATATTTTTCACATGTTCC10.5882352941176471No Hit
GCGGTCCACCACCTCGGAGCGCACAAAGAAGTCATTGCCGTCACCATTCA10.5882352941176471No Hit
CAATAATTGCGAAATTGGTGTCTTTTCCAAACTCACAAATGCTTATTGTC10.5882352941176471No Hit
CTCATATGGACTTTAGCTACACCATGAAAGCTTTGAGAAGCAAGAAGAAG10.5882352941176471No Hit
GTGTTGGGGGGGGGCGGTGGGGGGGGTGGGGGGGGGCGGGTGGGGGGGGG10.5882352941176471No Hit
CATATGGACTTTGGCTACACCATGAAAGCTTTGAGAAGCAAGAAGATGGT10.5882352941176471No Hit
GACCTGCAGGCTTGCTTTTGAGAAAACCGGTTTCTCTCGGTTTGCTTCCA10.5882352941176471No Hit
GTCTTTTATCCATGTTGAGTTGTATTCAAATCGATAACTTCTGTTCTGTA10.5882352941176471No Hit
GTGACTGCAATGAAAACACTGTGAATGCAAGAGAGTCCAGTCAGCGTAAA10.5882352941176471No Hit
ACTTATAATAAATAGGCTTTGGCCCATAAGTGAGGCTCTGGCGGGAAAGA10.5882352941176471No Hit
GTTCTCATCCTTCAGAGACTACGAGTGTCATAGGAGCATCCGTCGACAAA10.5882352941176471No Hit
GTACTTATGAAACCAGTCAAATCATAAACCTTCAAAAACAACACAAAAGT10.5882352941176471No Hit
AAATATGACTTGATGTCATGTGTATTATTGAGTATAAGAACTTAAACCGC10.5882352941176471No Hit
GTTCGAGGCAGCCGTCAGGGTCGGAGTAAGAGCAGCGGCAGTAACCTGCG10.5882352941176471No Hit
AAACTACACAANCCAGAAACTTGATCAAACCTATACACTGAGAACCAAAG10.5882352941176471No Hit
GATGATGATGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.5882352941176471No Hit
GCAATAAGAAGGTTGGTTAGTGTTTTGGATTCGAATATGACTTGAGCTCA10.5882352941176471No Hit
CTCCTAACGGTGTTATGCATCAAAGTTTCTATAAATGCTTAGTTCCCCAG10.5882352941176471No Hit
GCTCGGACACATTGAGTACATCCTATACAAGTATCATAAATTTTTACTGA10.5882352941176471No Hit
AGTATATTCTCTCATGCACTTAATTATTGTTTGAGATCAGCAAATGCATG10.5882352941176471No Hit
GCGGTCGACTCTGAATTGCTGTACGCTGTGGGGGGGTCTATGGGGCCAGT10.5882352941176471No Hit
ATCTAATGCCCTTTGCCCCCGTGTCACTGCTGCTTTCGAGATAGCTGCAA10.5882352941176471No Hit
GGCTAAATTTGTTAGACCTGCATACTTTACTTTTATGTATAGAGCTAAAT10.5882352941176471No Hit
ACTATATTCTTCTTAAAATGTTTCTTAATTTAATTTTCTATATGCTCTGT10.5882352941176471No Hit
AGGTTGGTTCGAGCGACAAGGTGTGTGAGTCATACTGCTGCAAATTTTCA10.5882352941176471No Hit
ATGATTTACTGGTCTTGGTACCGTAAGCAGATTTCGTCACACCATTGCTT10.5882352941176471No Hit
GCTTTGAGAAGTAAGAAGAAGGTTGGTTAGTGTTTTGGAGTCGAATATGA10.5882352941176471No Hit
GCCCAAGAAAGGGACCCAAGTCCTAGTAGCCCTGCTAAATGGTGATTCAA10.5882352941176471No Hit
CTTTTTGACTAAGCTACATACTTGAAAGTGTTGGCATTTTCTGTATCCCT10.5882352941176471No Hit
TGGCTACACCATGAAAGCTTTGAGAAGCAAGAAGAAGGTTGTTAGAGTTA10.5882352941176471No Hit
GTTGTTATACTCAATGATACACATGACATCAAGTCATATTCGACTCCAAA10.5882352941176471No Hit
GTAGAGTAGTAAGAACAAGCAAAGGGTAAAAAAGTGTGTTTTGTGAAAAT10.5882352941176471No Hit
CTTTTTTGTTTTCCTAAAAAATATAATACCTTTAATAGTTATATACCTAA10.5882352941176471No Hit
GTTTTCTTGTTAGAAGATACAAAGCCAAAGACTCATACAGACTTTGGCTA10.5882352941176471No Hit
CATATGGACTTTGGCTACACCATGAAAGCTTTGAGAAGCAAGTACAAGGT10.5882352941176471No Hit
GGTGGGGTGGGGTGTGGGGGGGGTGGGTGGCGGTGGGAGGTGGTGTGTGT10.5882352941176471No Hit
GTGTATGATTGAGTATAAGAACTTAAACCGCAACCGCATCTTATAAGCCT10.5882352941176471No Hit
CACCTTAACTCAGCCAGGTCTTGAGGATCAGCGTGTGGTCTGTCTCTTAT10.5882352941176471No Hit
TTCTTAATTGAGGCATGAATTAGAGTACCTTACAATTTCACAAACATATG10.5882352941176471No Hit
CTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCATCTAGTAGCTGGT10.5882352941176471No Hit
GCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGGTAAGTTTCCCCG10.5882352941176471No Hit
CTGTTCTGGTCTATCTTTTTAGCATTATAAAGAGACTTTTGAAGCATGCT10.5882352941176471No Hit
ATATTCTCCTTCATATGATAAGAAGGATTCAAGAGATTATGATATATAGT10.5882352941176471No Hit
GACTAACCCCTGGTAAAAAAAATTGCATAATTTAATTGTTGAATTTAAGG10.5882352941176471No Hit
CCTCTTTCGTTCTGTGCAGTTTGTTTACAGTGCACCAAACCCAGGACAAG10.5882352941176471No Hit
CTTTTCTTCTGTTATTTGGACTCTTGAATCTAATTGTGCGGATGAATGGT10.5882352941176471No Hit
ATTGTGAGTGACGGAAATGAAGCATCAAAAGAATACACACACACACATAC10.5882352941176471No Hit
CGTTTGGGAGATTTTAAAGCCTTGTTACTGATCCTAAAAATCACCATATA10.5882352941176471No Hit
AGATATATCATGGCGAATTCTTCAGAAAAAATTGTGTCTTCCACAAAGGA10.5882352941176471No Hit
TAATTTTATCAAATTCATATACTTTTTTTTTTTTTTAATAGATACTGTTA10.5882352941176471No Hit
GAAGCCGGGTTACGGTGCCCAACTGCGCGCTAACCTAGAACCCACAAAGG10.5882352941176471No Hit
CCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGG10.5882352941176471No Hit
AACTAATGTAAAGGACGATGAAGGAGAAAGCAACAGTGCCGCGATAAGTC10.5882352941176471No Hit
CCATAAAATCATGGATATGTTATCAAACGAGATTGTGGAAGTCAAAACTC10.5882352941176471No Hit
CTTAATCACACTCTTCTTCTCTTTGTTAAATCTCTGTTGATTAGGGTTTT10.5882352941176471No Hit
CCTCATGCTCCATTTCTTCTTTCTCAACTGACACACTTGGCCTAGTCTGA10.5882352941176471No Hit
AGAAAATTGCAGAGATTTGTGTCCTATTTGTAGTTACTCCTTCATTTCAT10.5882352941176471No Hit
GTTCTAAGTTCAAGAAAATTGATTACTCTCAATTTTATTGATTAGTGCCT10.5882352941176471No Hit
CCTTCTTATATAGGTTTTTTTTGTTTGTTTTCATTTGATTAATATTGACT10.5882352941176471No Hit
GCGATGATATCGAATGAAAGAAATATCATGAATAACAATATCGGAGCTAT10.5882352941176471No Hit
TTTGTATACATATCATGCTTTCCTTGAAACCCTAGCCGCCTATCATTCTG10.5882352941176471No Hit
ACATTAGTTTCAAGGTAAGGATATCGAGGTCACAACAATTAAACCTAATT10.5882352941176471No Hit
ACTTCGTGTAACCGTGTTCCATAACATCCAAAGACAACATAGAGCTTCCT10.5882352941176471No Hit
AACTAATGTAANGGACGATGAAGGAGAAAGCAACAGTGCCGCGATAAGTC10.5882352941176471No Hit
GTGACTGGATCTGCGGCTGCTCGCGTGCGACGACCGGACTCGGCGCCTGC10.5882352941176471No Hit
AATTTTTACCTTGTAACCGCAGAACGATTTGATTCATGGATGGGGTCTGG10.5882352941176471No Hit
AATCTATATTTTGCTAGATATGATCTGTTTGTATGATACTTTGCAGCCAC10.5882352941176471No Hit
GCTGTCGTCGACGAAGCTTCAGACTTCTTCAAGCGTTACGGCGTCGATGA10.5882352941176471No Hit
GGCCAGGCAGCTCAATTCTTTGAATAGAAATGCAGTCAATGGAAGTTGCG10.5882352941176471No Hit
GTCTTTAAGAGTCGAATATGACTTGATGTCATTGTATGATTGAGTATAAG10.5882352941176471No Hit
GAACTTAAACTGCAACCCGATCTTGTAAGCCTAAGTAGTGTTTCCTTGTT10.5882352941176471No Hit
CATGAAGTCAGAATGCCCAATGACGCCTTCAGCAAAAGTACTCTATCGCA10.5882352941176471No Hit
ATTCACTATTAATGAGAGACTGCCTCCAAGAGAATGACCCGTGAACTGAA10.5882352941176471No Hit
CTTTAGTCCGAGGATCAAGATAAGACATTGATAATTCATTCCAAAATATA10.5882352941176471No Hit
CTAACCAACCTTCTTCTTGCTTCTCAAATCTTTCATGGTGTAGCCAAAGT10.5882352941176471No Hit
GATCTTATCTCTAGACCTCCCTCTGGTCTCATCAACATCGAGGGAAGGCT10.5882352941176471No Hit
ATATACATGGAGTCATTTTAGCTGTGTCTTCGAGTATATTCATCGGTTCT10.5882352941176471No Hit
GGCAGCGCTGCGGTACAGACGAGTTCCCGGCTGCCTTCAGGGGTGGTGAC10.5882352941176471No Hit
GCCCAGGAAAGTGANCCAAGTCCTATTAGCCCTGCTAAATGGTGATTCAA10.5882352941176471No Hit
ATGTAGACTACTGAATCTTGCTTGATTTGATGATTCTCAGATGTTTTTTT10.5882352941176471No Hit
ATGTGATCCTGCGATCTTTTGTCATGATTGATGGATTGGATGATCTTGTT10.5882352941176471No Hit
GAGATATATCATAAGACTAATAAGTTGATTCGAGATTTCGGTATCAACCT10.5882352941176471No Hit
AATCTATATTTTGCTAGATATGATCTNTTTGTATGATACTTTGCAGCCAC10.5882352941176471No Hit
CTTTAGTCCGAGGATCAAGATAAGACATTGATAATTCATTCCAAACTATA10.5882352941176471No Hit
CCATCACTCGTCCTGACATTCAATTTGCGGTCAATTTTATATGTCAACGG10.5882352941176471No Hit
CCGGGTGACGGGGGGCGTGGTTGGTGGGGGCGTAGTGGGGGCCTGGGGGT10.5882352941176471No Hit
GTTGTTGATGACAAAGATTCCCAAGTCATCAACCGTATTAGTTTCCCATA10.5882352941176471No Hit
GTCCTGTTCTGACCAATAATCCACATCGTTACATCCATAGTAGAAGTCAA10.5882352941176471No Hit
GGTTAAAGCGCCCAACTCATAATTGGCGAATTCGTAGGTTCAATTCCTAC10.5882352941176471No Hit
ATCTTAGAGTTGGACTTATTTACAACCCAATGCCATTAACATTAAATATT10.5882352941176471No Hit
GGTCCGAGACTTCATCGACCGGGTCCAAGTATTTGATTTTTTTTTGGAAC10.5882352941176471No Hit
GCGGTAAGCAATACGTTGCTTTTCAAGAAACTTTCCAACCGAACTGGTGG10.5882352941176471No Hit
TTTATCTTCAGTTCTCTCGATTTCAAACTTGTACTTGTCCTACTTCAAGT10.5882352941176471No Hit
GATCCGTCGAGGATGAGATCATCGATATCACTCGGAGTCCGATCTCGGCG10.5882352941176471No Hit
GGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGGATCAACCAGGTA10.5882352941176471No Hit
ATCTTAAGTAATGTGNGACTATTTCAAAGTGGAAGGTTGCTTAGCTGTTG10.5882352941176471No Hit
TCATACGCTAATATCGATTGATTTTGTTTATCCCAGATTTGGACCAGTAC10.5882352941176471No Hit
GATGTTACGTTATTAAATAATTTGGGCCTACGGGGACTGATAAATTAGGC10.5882352941176471No Hit
TTGTTAAATAATTTCATTAGTGCCAAATATTACGTTGAATGTAAGTCTAT10.5882352941176471No Hit
ATATTAAACTCAAATAAAAACTTCTAGTCTTTCTNTAAAAAAAACAAAGA10.5882352941176471No Hit
TAATTGTATGGTTAATTTTGTTTATTTAATAAGATTAACCAGATTAATTG10.5882352941176471No Hit
GATTATAGCAAATTTTTGAATAACATAGGATTTGGTAAAACTTTTATTAA10.5882352941176471No Hit
GTCCTATACATATGACCCGCGATTAGAAAAAGAATTGCGATAGCTAAATG10.5882352941176471No Hit
GGGGGGTGCTGTGGCTGCTGGGTCCCTGGCGCACGAGGAGGATGTTGGTC10.5882352941176471No Hit
GTCATTTCGTTGAAGCTCAGATCCTTGAAGCAATTGGAATCGATTACATC10.5882352941176471No Hit
GTTAAAAGCTTTAAAAAAAAAGGAGCAGCACTCTTGCCAAGGCCAAAGTC10.5882352941176471No Hit
CATCTGAAACATCTGAGTAACCACCCGGTTAAAGAGAGTATGTAGGATCT10.5882352941176471No Hit
ATATAATATATATGGTAACAAATATCATTAATTTTTTTTGGTTTTGTTTT10.5882352941176471No Hit
GAGTAGTCTCGTCCTCCCACGGTGAAAGTAGCGTAACCGAAACCTCTACC10.5882352941176471No Hit
CTTTATATACAGAGTCTCTAGGTCAAAAATCAGAGTTAATGTGCGATCTG10.5882352941176471No Hit
TCTCAATATCTTAGTTCACACAACTTTCTAACAAAAAACTCAAAACTGCA10.5882352941176471No Hit
AGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTA10.5882352941176471No Hit
GAGATATGAAACTAGGAAAACAGTAACAAAACAGGAATATAAAAAGGAAA10.5882352941176471No Hit
GTGTATGATTGACTATAAGATCTTAAACCCCAACCGCATCTTAAAGGCGT10.5882352941176471No Hit
CAACTTGAACGGTTAAAACAGCGGATATTACCCACCGATGTTGTTGACGA10.5882352941176471No Hit
TTTGTAGCCACCGTGGTTGTTGTTGATGTAGCTAACAGGGAAGAAGCATG10.5882352941176471No Hit
AATTTCATCCATTCAACCAAAAAAGTTATAAAGAAAAATTGTTTAACCTT10.5882352941176471No Hit
GAATTAGCAAACCGTAACGAAGATGTTCTTGGCAACCATCTTTTGATGGG10.5882352941176471No Hit
CCCGGGAAGTCCTCGTGTTGCATCCCTCTTTTTTTTTTTTTTTTTTTTTG10.5882352941176471No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)