FastQCFastQC Report
Tue 23 Aug 2022
HNCMMDSX3_n02_chi_005.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCMMDSX3_n02_chi_005.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences137
Sequences flagged as poor quality0
Sequence length151
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCTAGTTTAAATTCCAAACAGGTCGCCCCCCACCCAGCGAGATTAAAC10.7299270072992701No Hit
CTGCGTTATGATTCTAATATAATTGAGTCATCAAAAAAAATTATGCATAC10.7299270072992701No Hit
TGTTTAGGCAGTTCATACCATCCATACATAGTGTGGGGATCTCAGATGTC10.7299270072992701No Hit
CCCCTCAGGAGTACAGTAAGGTTAAACAGTGGGAGACGGCGAGACGTCGT10.7299270072992701No Hit
GGAAGCAACCATGTCAGCAAAGTATACAATGGCAGTTTCCATGCTCGACG10.7299270072992701No Hit
AGTTGTCGCGGAGCGTCGCGCAGCGATTTTCGGGGGGGGTGAGGACGGTT10.7299270072992701No Hit
GCATAAGAACCGGCTGTTGATTCGCGTGTGGAGACTTCGCTGCGGTGAGC10.7299270072992701No Hit
ATACAAGGCATCCTCCGGATAATTCAAAGCTAAGCAATTAGAAGTCCGAC10.7299270072992701No Hit
GTATTCGGTAAACGAACTAAGACCATTCCAATGCTCCTTTTCGCCATGCA10.7299270072992701No Hit
CTGTGGACCGCCACGGGGGAGGATGACGGAGGCGCCCACGAGGGGGGGTG10.7299270072992701No Hit
ACAATAAAAAAAAACATCTAATAAGTCATTAAATTTTAAATACAAGCCGC10.7299270072992701No Hit
GAAGCACCCAGCCAACATCCAAAGCCGCAATCTCGAGCATAATACTCGTA10.7299270072992701No Hit
CAACAAGGCCCAAATGTTTCGCAACTTAGCTCCGAACACAAGACCCAACA10.7299270072992701No Hit
GCCAAATATAAGTCACATTTAAGATCTCTAAACAACAAAAAAAGTCATAC10.7299270072992701No Hit
GTTAGAGGATGGCCGTTGTGTGGGTGTCCCCTGCTGTGGGCGTTCGCTGC10.7299270072992701No Hit
TAATTAAGATATGTGTGAACTAACAGATCGATTAGAAAATACATACTTTA10.7299270072992701No Hit
CTATTTCACCGAGCCTATCACCGAGACACAGCCCAGATCGGGAAGCAATT10.7299270072992701No Hit
TTATGGGGGTGCTCCTTTGCTCCGATTTCGTGGCAGACACGAATGCGACT10.7299270072992701No Hit
TTTGGGGTGGGNTTCGGGGTGACTCTGGTTGGGTGAGGCGGGGCGCACGG10.7299270072992701No Hit
GTCTTCTCCCGAATCTCTTTGATCTGCTTGTTGGAAACTTCAACATGACC10.7299270072992701No Hit
GGTTTAGGAGACCTCGGTCCTATCCAGTAGACCCGGGACGCTTGTCGCTT10.7299270072992701No Hit
CCCGTGGAGGTGGGCCTGGCGCTTGCGAGGGTGCGGTAGTGTGGGACTGG10.7299270072992701No Hit
GTTTACCCTACACAGCGTCTAAAGCTAACCAACACTCCGACATTGCACAA10.7299270072992701No Hit
GAAAAAAAAAAAAAATCATCGAAAGTCATTTACAACAATCTATACAACGA10.7299270072992701No Hit
AAACCCGGTCATTTCTCAAGAACAATAGCTCAGCGACCTGATACTACCAA10.7299270072992701No Hit
GAATATAGGTGCGCTGTGAGTTGGCTAAACACTCCTATCTAGCAGTCGTA10.7299270072992701No Hit
GGATATTGCTTCAGGTTCACATCATGTAGCTGTTCTAACTTCATTTGGAA10.7299270072992701No Hit
CACCATAGTACCCCATTATGGAAATACAGATATGCCATCTTATTTTACCT10.7299270072992701No Hit
GAAAAGAGGATATGAGCACTAATAAAAAATTTTTAGAGTATAAATAATGA10.7299270072992701No Hit
GAACCGATGTGTGTCCATGCTTGCAAATCTAGTCAATGCACCGTGCGACG10.7299270072992701No Hit
GAAACTGTCCTTGACTGGAACAAACTGATCAATCGACTTCGTCAGATCTT10.7299270072992701No Hit
CGTATCAACACAAAACAATCCTAGACGCTCACAGGCCCCTGGNCGAACCC10.7299270072992701No Hit
ATCTTATCCCAGGCCGCTGATCAATTGGCAACGAGGCGACCCTTGTACCG10.7299270072992701No Hit
GTATTGCCTGGCATCTAATAACACGATTGGGTACGCAATAAGTAGCCACA10.7299270072992701No Hit
AACTTAAAGGAAACAAAAATGTTAGTAAAATAAGTATCACCTAACAATAC10.7299270072992701No Hit
ACCCGACGAGTGATGTGTATCGAATCCAGATCGATCGTACCCTGTTCGGT10.7299270072992701No Hit
AGTCCTCTCACCCCGTGACAAATTTGACTTTCTCGTTGGTGAGTCAGGCG10.7299270072992701No Hit
AACCAAGATTGAGTGGGGATACAAAAAAATAAAGAAAGTATTATGAAATT10.7299270072992701No Hit
CTTCGGGGATAACTCAATTACATAAGAAGATTCCTAAGATATATCTCATA10.7299270072992701No Hit
ATCTTGAATCTCCTTATCAAAATGATAATAGCACCCGAGGCTAACGAGCA10.7299270072992701No Hit
TTTTTGGAAAGCCCAAAGAGAGCTCTCTGATGACTGAGGAAGGAACATGA10.7299270072992701No Hit
GAATAACTGTAATGTCTGGTTCGTTTGAGGATGGCGCTTCTAATCAATGT10.7299270072992701No Hit
GGAACAAACTGCATCGACCCCATGCAAACGGTGCTATTCTAGGCCATAGG10.7299270072992701No Hit
AGAAAGTCCTAAAACATACAAGAAATCCCAAAAATAATTAAGATTTATAA10.7299270072992701No Hit
ATTTTAGGAAGTGTATTTCTTAAACTTAAAAATGCACACTTTTCAAATCG10.7299270072992701No Hit
GATTAATAATATTCAGAAGCACTAATATAAAGTGCCACATGTAATAATGC10.7299270072992701No Hit
TCGTTGGATATTTCTAGAATTATCCTACGAGTGTGACAACTAAATGCACA10.7299270072992701No Hit
AATTTCCAGTCAATAGGTAATGGGTCTTGTGTGTAGTAGATTCGATATAT10.7299270072992701No Hit
GTCTCGGGCGGGGTCGGGGCGGGTTGAATAAGAGTGCGGGGAGGCGGGGT10.7299270072992701No Hit
ATTGGGCGGCGGGAGAAATGTGACGTTCGCGATGGAGAACAGTGAGTGGG10.7299270072992701No Hit
CCAACAACTGTCACAAACGGAAACTGAGCCACCGAGTCCTTTCTTCCTCA10.7299270072992701No Hit
TAAATCCACTGGTCTAGATATTAGCTACTAGTTATGCTAACAACTACAGT10.7299270072992701No Hit
GTCTAATGCATAACACCTAAAACTTCTTGCTAAGACGGACCCCTGTTACA10.7299270072992701No Hit
TGTGACCCTCCTGGTTTATTTCTCGAGCGTCAGCTTCATAGATAAACTTC10.7299270072992701No Hit
CCTAACAACGATAAGCAAAAGACCATATGAGACTTTGGCTAAGAGACAAC10.7299270072992701No Hit
AACATAATTTGTGCCAACTTTTTTTTTTTTCAAAACATGAATTATATATC10.7299270072992701No Hit
TGCCTACATGTATGAACCAATGAGCTCAAAGAATCTGTTCCGACTCTTGA10.7299270072992701No Hit
TCTCTACTCTCGCGCGACTTCCTGGAGTAGCCTTTGGCAAGCCCGGGAGC10.7299270072992701No Hit
AAGTTACTGTTGGCGGGGGGTCATGTACTGGCGCGGGATCCCTTACCTGG10.7299270072992701No Hit
AGCTTGGTGCCATAAAAACCAGTCATCACATTAGAACTATCCAAACACCA10.7299270072992701No Hit
CTATCCTTTACACGTGTCTCCCTTGCAGCCACACAGTCCACATAAAATGT10.7299270072992701No Hit
GTCCTAGCTCTACCGTCTCTTTTGTTTCATTTCTTCTGGAACAATCACAA10.7299270072992701No Hit
GTGCTACTCTCCGCCTTACATTAATTATGTATCAACGCTCAAACAAAAAT10.7299270072992701No Hit
AAGTGGCCTGCNGACGCTTAACGTCGGGATTTGAGTTGTCGGGTGGGGTG10.7299270072992701No Hit
ATCTCTCGGCCGATAGCTAATGACAGCTGTTCAGGGACTTCAGCAGTTGG10.7299270072992701No Hit
ACATTATACAAATGACACCCTTTAAAACCTTCCTATACAAAAAAACCCTT10.7299270072992701No Hit
TTAAACAGGTTTAGAGAGAGGTGCGGGTTCGAGGATGCCTGGGCCGGTGT10.7299270072992701No Hit
AAAGCTGCGCCTCAACGAATAACCCGGACAAAAACCAAGCTAACCATAAG10.7299270072992701No Hit
ATCGTGAGGGTTCAAGTCCCTCTATCCCCAGCTCTACTCCCCGAAAAGGT10.7299270072992701No Hit
GCACGGTCTAGTGGTCCAGGGTTCAGGCTGACCTTATCCCACACAAATCG10.7299270072992701No Hit
GTGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGG10.7299270072992701No Hit
CACATAGATTCCTCCCATCATAAATAAAAAAAACACTTATGCATGTCTAA10.7299270072992701No Hit
GGGTAGTTGCGTCATTCTACGTGTGTAATTTCTTTTTTTGGCATCTCTCT10.7299270072992701No Hit
TTACAACCGTTTGCCGAAGGAACCTGAGCACGTCTCCGGGTCGGAGGGCT10.7299270072992701No Hit
TTCATCTTCTTTCCAAGGTACTAATCTTCTCAATCCTCTCGGATTCAAGT10.7299270072992701No Hit
GGGTGTGGGTTTGTGGGTCTCTTGCTACCGGTTTGGGGGGTCTTGGTGTT10.7299270072992701No Hit
CCCTAATTCTTGCTTCAATCTCCATTACCCAATCTCTAGATCCGTAATGC10.7299270072992701No Hit
GTACAAACTCAAACAAAAAGGGACTCATTATGACACGATAACGACCCCCG10.7299270072992701No Hit
ATCGTAAATCTTTTCCCTCTCTGCTCGGAGTGAGGCGTCTTGTTGTGAAC10.7299270072992701No Hit
ACCGTAATCTGATCAAGAAGATGAGCGCAAGTCCTCCAATCGGTACACCA10.7299270072992701No Hit
AAGTCGTTCTCCGGGCCGCCCGACCCCGGATCGAGGTAACCCGGTCCGGG10.7299270072992701No Hit
GAACTTACCACATCACTGAGCGTGGTTAATCTTGGTCTCCTTTTATATCA10.7299270072992701No Hit
GTTAGGGTGACTGTGGCATGAAAGGAAGCTTTGCTACGCGGGTTTCTGGA10.7299270072992701No Hit
GTGTAGAGCAGAGGAGCGCAGGAGGGCCGGCCTGTCTGGTCTCGCTCTGC10.7299270072992701No Hit
GTGTAGACTGGGAGAGCAAGGGATAATGTATTGATTAAACTCTCTTTCCC10.7299270072992701No Hit
CTGATACATAAAGAAGATAAATCAATAATCAGAATGTTCGAAAATAAATG10.7299270072992701No Hit
ACTGTGCCCATTGGGTCACTCCCGTGGATGTTTAACGAAGTCGATTGCTC10.7299270072992701No Hit
ACTTTATCCTTCACCTTGTCAATCTATTAGAGCCCAGTACAACGTTTAGC10.7299270072992701No Hit
GACGCAAGGAAAACCTGCCATCAATAACAGAATTAAGACACGGCGGCTCA10.7299270072992701No Hit
TTTGTTGAGAGCTCTTAAAGTAACTTCTGAAGAAGAATGTGAACCTCTGA10.7299270072992701No Hit
CCTGACCAGCCTTGTGTCAAGATCCGGAAGCGGTTCGTCTTCGGCTGGCT10.7299270072992701No Hit
CATCAAATAAAAAATAGGTAAGCAAAAGAAAAATCTAATCATACACAAAA10.7299270072992701No Hit
GTTTGTCAACTTAGTCTTATCGACCGAGATTCCGTTATTCACTTGAGACT10.7299270072992701No Hit
TCCCAGTGGTTACTGTGGTGGTCGAATGATTGTGTGTTATTTGTGATATT10.7299270072992701No Hit
GAGGCAACCTAGTACATGAGAGGTTGAAGTTTTTATGATCTGGTGTATGT10.7299270072992701No Hit
GTTTTTTTTCTACTCCAAATTCTGATCTTAATGTACATTTTCGTGCATTT10.7299270072992701No Hit
CTTTATGTGCTCATCGCGCTTATGGGCTCTTCTTGCGGGTTGTTTTGCGC10.7299270072992701No Hit
AAATAACAATTACAAATTTCAAAAGAGCCAATATCATAAAACCATAAAGT10.7299270072992701No Hit
ATCTAAAAGGGATAAAAGGAAGAAAAAACACTTATAACACTAAAATATAA10.7299270072992701No Hit
TGGTCATATTTTGTAGTGGCGACGCTTCAAGGGCATCTAATCGGTAGAGG10.7299270072992701No Hit
GTTGTGTGCCGGTGAGGTAGAGTTTTGTAGGCTCCAGCGGTTTCAGTTTC10.7299270072992701No Hit
ATATATAATTACAGATGTACATGTAATTAAGACGTGCGGTTATTTGGCTC10.7299270072992701No Hit
TGTTACAGAGAATCCCTCATAAACTCCACATAGTGTCCGACCCGGGTTGA10.7299270072992701No Hit
TAACTATATAATCCATCTAAATAAAAGATGACTCAAGTCTACTTGACAAT10.7299270072992701No Hit
AAGTAAAATAACTAAGTGAGGTTTTAAATATTACTAAAAAAAAATTAAAA10.7299270072992701No Hit
ACCTTATAAACCTCAAGAGTCTCATGTCAGGACTCGATAGTGTGAACCCG10.7299270072992701No Hit
GTTATTTAGTGTGAATCGCTGCCAAGTTTCTGTGTATAAACAGCACATGT10.7299270072992701No Hit
ATGCGGGTGGGGCTTGGTAGCTCGGGGGGGGGGGGCGGGGGTGGGGGCGG10.7299270072992701No Hit
AAAATTAGTCATTTAAAAAACCTATAAAACTGGTAGTACTAAATGCAAAA10.7299270072992701No Hit
GAGACGATTATTATGAACGAGGAAGGAGAGGAATTGGAGCACACGATGCA10.7299270072992701No Hit
CACCAGGGCTGGGTCGTGGTACAAGTAGTGGCCCACCCCCACTGGGAGCA10.7299270072992701No Hit
ATGAGTATGGANAACATATTAACGAACACAAATTCTCCTCTTAGTCTAGT10.7299270072992701No Hit
CTTCTGCACCAAAACACTCTCAACAAATAGAAGAAATTACCTTACACCGT10.7299270072992701No Hit
ACATAAGTAGATTCCTAAGATTTATCTCATATTATGATATAAATAAACAT10.7299270072992701No Hit
CGTTTTTTTGTAATGGGGTTTTTATGAAGGAAAATATTAATTTCATATCT10.7299270072992701No Hit
GAGCTGTTGGTTCAGTTAATCTTGGACGTATGATTACATGCTTCTGTTCA10.7299270072992701No Hit
ATCCACCATCATCTACTTCAGAGATCTCTACTGAAAGATGTTTACCATAC10.7299270072992701No Hit
AAATATAATTATATANAATAAAGGAAGAACAGAAAAATCAACTTTAAATA10.7299270072992701No Hit
GTGAACAAAACNTTAAGCCATGATCAAAGACTGAAAAGAGCAGAGGTGTT10.7299270072992701No Hit
GTCGATCTGTCCTTGGAATCGTCGAGAAAAGTTTACCGGGGCCGAGGACT10.7299270072992701No Hit
TCATAGAATAATCCAGAAATTGAAAAAGAAAAGAAAAAAGGGAGGTTTGT10.7299270072992701No Hit
AGTAAATCCTTTGTATTTGAAAAATCTCGATATAATTGTTGAGATTAAGG10.7299270072992701No Hit
AAGTCATACATTCCTTCACCTACAAGGTGATCCACTTGATGGTGGTTAAA10.7299270072992701No Hit
CCCACCAAACTGAGCATCCAACCGTGGCAGCTTGCTCCAAAAGAAGTTTA10.7299270072992701No Hit
ATATATTTTTTTTACTACAACGTAAGCAANTACCAGAAAGTAAAGTCTAT10.7299270072992701No Hit
ACTGTGAATTCGGGGTTAATAAAAAAATTTAAAATCTACAGAAAGAAATT10.7299270072992701No Hit
GCTATCTATTGTGTCAATTCCTCACTTTAAGTCATGCCTATCATGATTGT10.7299270072992701No Hit
CAAATTAGGAAAATCTAATTTTATTTAAAATTGCTAATCATTTTGAAGAA10.7299270072992701No Hit
GACTTGAGGCGGTTTGGGCGGATGCTCGATCTTGGGGATCGAGTAAAGAG10.7299270072992701No Hit
GATTAGAAGAAACCGGACGNAGAGCGCTTGCACCATGGGCCAATGGGTCC10.7299270072992701No Hit
AAGATGTACTATCCCACAAGATATCTAAACTGATCTATACCACGACGACA10.7299270072992701No Hit
ATAGGACGCGTNCTGGAGAGGGGCAGGGTGCAGATACTGGGGCTCAGGGT10.7299270072992701No Hit
GCCAAAGCAGGTATTCCTCCCGGTGGGGGATTTTGCTTCCGGGCCGTGGC10.7299270072992701No Hit
GATATATTCTTCCATGTACATGTTGTGTTTATTATACTCATTACTTTCTG10.7299270072992701No Hit
GGTTAATAATGTTTTACAAGATTACTTCGTGGCTGGGTGAGTGAGAGATT10.7299270072992701No Hit
ATTTTTGGTAAGCCGAACTTGCCATGCGGGAGGAACCGGAAGCCGGGTTA10.7299270072992701No Hit
CTGCCAGACGCTGAATAACCACAACACGGAACATTTCATAAACCACCAAC10.7299270072992701No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)