FastQCFastQC Report
Tue 23 Aug 2022
HNCMMDSX3_n01_chi_061.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCMMDSX3_n01_chi_061.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGATACACACCCTCCACTCTCCCAGGGTAGTGGGGGCGGCGGCGGCACT14.545454545454546No Hit
GTACAAGACCCTTTACATGTAAGACCGATTGCTCATGCTATTTGGGATCC14.545454545454546No Hit
GAGTACTCAGGACAAATCCAATCACAGAAACAAAAAATGAAGAAACAAAT14.545454545454546No Hit
TATATATATATATTGATAAAAAGAACGAGTAAATGATATTGGGGATACTT14.545454545454546No Hit
ATCAAATAGCATAAACGAGGGATGATTTGATACGAGGAGTGTGTGACATT14.545454545454546No Hit
CTATTGTGTCAGCCGGGGAAGCAGGAAAAGGGAAGGAAGTGATTCCCCTT14.545454545454546No Hit
ATATTCCACACCTAAATCTTCTGAGTCAAACAAATTCTCAAACCCATCTT14.545454545454546No Hit
TAGTTATGAGAATCAGTGTTCTGGCAACGATACGTGATCTTCAACGAAAT14.545454545454546No Hit
GTCCTTTAAGTCATTCGAGACGTGAGTAAAACCCAGATTGGAGACGAATC14.545454545454546No Hit
GTTTTCTCAATCTTCGGAACTTGAGCTCCTAAACTGTACACGATAAGACG14.545454545454546No Hit
AAAATCTACAGATGTTTGAATTCTAGTGATGTGATGATTGGTGTTCACGG14.545454545454546No Hit
CCTCCTAGAGTGTTTGTTGATTATCAGGTATTATTTGCTTTCCATGAACC14.545454545454546No Hit
GATCTCTCTCAGTACAGATGTCTGTTTATGATTGGCTTCGCTTTTGAATT14.545454545454546No Hit
GGCCAGATCTTCGCCAAGTGGGGCGAAGAGGGCGTTACGTACACCCGTGA14.545454545454546No Hit
GAAGGCAGGGCTAGTGACTGGAGTGAAGTCGTAACAAGGTAGCCGTACTG14.545454545454546No Hit
GATACATACAGACTTGGAGCCCACTCTTCATCAGATGCACCAGATGTATG14.545454545454546No Hit
CCCGTCCGCCACTGGAAACACCACTTCCCGTCCGACTTGCATGTGTTAAG14.545454545454546No Hit
TTTTAGAAGTGGTAAAAATTATAGTATTACCATTGATGTTGTAGAAAGAT14.545454545454546No Hit
ACCTGAACCTGACCCTAACCCTAACTCTAACCCTATACAACAGATATTGT14.545454545454546No Hit
GTTTTAAAATTGCCAAACGTCTTAAATACATAAACTACACAACAATATGC14.545454545454546No Hit
GGATTGACATCCTAAAATACTACAACGACAAGATAGTGTTTTAGGGATTA14.545454545454546No Hit
GTAAAATAATTATGTTAACCTACTCAACGACATGACTCCAATGACAATTC14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)