FastQCFastQC Report
Tue 23 Aug 2022
HNCMMDSX3_n01_chi_059.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCMMDSX3_n01_chi_059.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences125
Sequences flagged as poor quality0
Sequence length151
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATAATATTCTGGATCAAGATGACAGTCAGAAAGTATTCACTGTTGCTACT21.6No Hit
CTGTAATAATATCTCGGGGTTTGCAGCGATAACTTGGTATATCAACTATA21.6No Hit
CATGGGGAACATGACCAATCCTCCCAACTTCAAATCCTCTTTTCCTTGCT21.6No Hit
CAATCTTGGTTACTTTTTTTATCACACGGCCTTGTTTAAAAATAAAAAAA21.6No Hit
CCTCAAAATCGTTAATATTTTTTACCCCATAAAACTCAAAATCACCTCAG10.8No Hit
CTTCTCTGCAAGAGAATTGTATCTTTCTATCCATGTTTTCCTAAATTTCC10.8No Hit
TTCATTCACAGCGATTTTTATTGGTATTTGTCGATTCATATATCAATTAA10.8No Hit
CTATATAACTATTGTCTAATCCGAAGAGTAATTGGCGAGAAAATGTATTT10.8No Hit
CTGGTTTCTTCTGTATAAATCACTCACAACCTGTAAAAGAAACAGAGGAG10.8No Hit
TCACTACCTTGAGACAATAATAAAAAAAGATCTTTTATTTCCTCTTAATG10.8No Hit
AAATAAGAGGAAGAGAGGATCATGGCACGTGAATGTTGATTGATCCATTC10.8No Hit
GAAAATGCAAGCATTGTATATACCAAGTAATTTGTGTATATCATGTCAAG10.8No Hit
GTGTTTAACATCTCGACAAGCATCGTCGGAGCTGGAATTATGGCGATTCC10.8No Hit
ACTTCTTCAGGCTCTCCCTCAAGTTCGATGCCATCCCACACATTTTTTTG10.8No Hit
ATTACANGGACATCATCGTGAGCTTTGTTCAAGTCACTGGTCTCTTCCTG10.8No Hit
GTATATATCTATAACTAGGTTGGTAATATAATTCTGTTGTACGTGAATAT10.8No Hit
ACATAAAGTCATATTCGACTCCAAAAAACTAACCAAGCTTCTTCTTGCTT10.8No Hit
ACATACAACCTCTGACTGGTATGTTGGTTTTTTCTTTCACGTTTGTGTGG10.8No Hit
GTTTTACAATTCTGTTTCAAAGATTGATCAAGTTTCTGAGAGCTAGGAGA10.8No Hit
CGAGAGAGAGATTGGGTGTGTGTATGGCAAATTTTCAGAAAAATAAAAAA10.8No Hit
ACATTGTACCCATCAAGTACTGACCTAACCAGCGGTCTTATGTCTGAAAA10.8No Hit
CTAAACGACATTGTTTCACCTGCTAAGTGTCTTTTCTCTGTTCTCTTAGG10.8No Hit
TATATCAGCTTAAGCTCTAACATAAGGGGGAGAGAAAAACATACAAAAAT10.8No Hit
TGTATATATACATAGAATGTTTGGTTTTGTTTAGACTTTAATTGATAAGT10.8No Hit
CGAATTTTCTATAATAATTCGCAAATCTAAATCGGCTAATTGTTCTCGGA10.8No Hit
GTGTATGATTGAGTATAACAACTTAAACCGCAACCCGATCTTAAAAGCAT10.8No Hit
ATCATTAACTATATCTTAATACAAGCTTTTTTAGTCCTTTTATTCGCGAG10.8No Hit
CCGAAGGAATAGCTTACCAGTGGAATTACATGGTGGAAAATCAATGTGAG10.8No Hit
GAGAACGCTCTAATCGGTGCATTTGCTGGTTGGTGACATACCTTATATGC10.8No Hit
TTCTTAAATATTTAAAATTAAAACGAACAAAGTCAGCTTACTTTTGTTAT10.8No Hit
ATATAACACTCCTAAGAATTAAGAATCCATGTTTCGTATAGGATTTCTTG10.8No Hit
CCCTCTTCACAGTTCCACTGTACATTGCTGAAACTTACGAAACAGATGTT10.8No Hit
AATTTGAAACATGTAGCATTTTGGCAAATGAACTTATAGAATGCGGACAA10.8No Hit
TGTTTCTGCAAAACTCTCTCAGTGATTTACAGTGTTTTCCTATGGCTTGT10.8No Hit
CTTGTCTGCAACAGGGACTCCGGCCTATTTTATTATTTAGCTTCGAGTTG10.8No Hit
CTCCTACTAACCTGAAACAACGATGATTTCAATGAAATATTAATCATCAA10.8No Hit
TGTTTGTATATCTTTATTGTATATTCTATCAAATTCCCATTTTGTAGCTG10.8No Hit
TTTAATAAGTTCTAAGGATTTCGATATAACTCAAAACTACAATCAATTGT10.8No Hit
CTATTAAACGACTTATTAGCCGATTAATAGATCACTTCGGGATGGCATAT10.8No Hit
ATCCTTTAGCATATGAGAAATTGGACAGATTTTCTTGCATTTTGTGCAAA10.8No Hit
CTATTCGAGCAGTAGTGGATCAAGGTATGCAACGAGCTGAAGTAAGGATA10.8No Hit
CACTGCTTCAGTGTATGTGAGAATCTGCTTTGCTGCGTTTCCCTCAAATA10.8No Hit
GCCTTAGTAGTGTTTCCTTGTTAAAAGACACAAAGCCAAAGACTCATATG10.8No Hit
GATATATTTTGAGACTATCATGAGAATATTTTGAGACTATCCTATCCTCA10.8No Hit
GCTTAAACTCACTAATTTATTACCCATATGCTTGTTTTTTGGACCATCTG10.8No Hit
AATTAAAATAATAACTAAACATACAAAAATGCATTTATCACGGCTCATGC10.8No Hit
CATGTAAGTTCTCAAATTATCTTGGTGAAAAAGAGTTTTGATACTCTTTG10.8No Hit
CATCATAGAATTGTACCAAATTTTGATGTCCAGATAACGCCCGCAGTATT10.8No Hit
CTCTTTATGGGGTAAAGAAGAAGAAAAAAAACTTAATAAAAATTTTGGGT10.8No Hit
ATTACAACCAGTCTTTGCTCAATGGATACAAAATACCCATGCTTTAGCAT10.8No Hit
GGTACATTTTCTTCATTTTCGCCTTCCAATTCTTCCAACTCACTTATTAA10.8No Hit
AGCTTAGAGAAGCTAGAAGAAGGTTGTTTAGTGTTTTGGAGTCGAATATG10.8No Hit
ATTCCACCCTGTCTACGCGAAGCCAATCAAAAGCTGTTTTCATCTGTGAA10.8No Hit
AATTTATGTTATGTTCGTAATTTAATAATACAAGAGAATATAATCACAAC10.8No Hit
GTCCATGAATGAAAAATCATAGATCGAACTGCCGAATCGGAAAAATTGGG10.8No Hit
ATCTAAACCACATTTCCAAAGTTTTAGTTTAAATTTATTTAGCTAAATTT10.8No Hit
ATATAAATGGTTCATGCTTGGACATTGAAAACCTGTGGGTCATTTAGTCA10.8No Hit
GAAATACTACCTATATAAAAAAAAACTTTATTGGTAACTTTTTTTTTTCA10.8No Hit
GGTGTACTTCACGTTCGGAGATTCAACCTTGAAGCTTTCGATGAACATTT10.8No Hit
CTCATTTGTATGATTGAATATCAGAACTTAAACCGCAACCTGATCTTAGA10.8No Hit
GCTAAAATGATATCAAAAGCTTCTGCGGTTGCTTCCTCGACATCATACAC10.8No Hit
GTTTTTAGTGATCATCTCAGAGAGTGTGGAATTATTTCACAGCTGACTCT10.8No Hit
GTATTAGTGGATAAAGAGAAACGTCTTGTTTAATTTGTTGAAAATTCTGA10.8No Hit
CATCTAGTCTTAACGAGCTTTGATGCATGAAAAATATTCGAAAACAATGC10.8No Hit
ACATAAGAAACTTGAGAGCTATCGCATTTTATTCTGAATCTTGTTTTCCA10.8No Hit
GCTATGAATATCCTTTTAGTGAGAAATATGTACGATTTGGTAGTTTCTGA10.8No Hit
AGAACGTAGAGGAGGTAGGATGGTCAGTTGGTCAGATCTAGTATGGATCG10.8No Hit
CTCAGAATCCAGAATCCAATTCATCATCAGATCAAACCTGATCAATTGGT10.8No Hit
CCAAATACTTTTCCTAAGGATTCCGTTAAATAGAAATAAAGAACGAAGTA10.8No Hit
AAATGAAACATTATTCGGAGAAAGATTTGCTGAAGCAATGCAGATAACGG10.8No Hit
CTCTTAGACACACCTCTCTCTTAGGTTGTTTACTCAAATTTTCCAAAAAT10.8No Hit
GTTTTGGGGTTAGAAATGATGAGAATTGAGAGGAAGGGAAGAGGAAAAGA10.8No Hit
ATATATATACGACTTTTTTATGCCATTTTTTTTATGAACCATTCTTTGAA10.8No Hit
CTCTTGGTCAAGGGCTTGAAACCAGCACATACCCTGGAGAAGTTATATTC10.8No Hit
AGGGGATATTCTATAATTTCGCATGTNAGGGGTTATTTCTTGGTTTCGTC10.8No Hit
GTAGCAATATGAACGTAATAAGCCAACTATATGAGTGTTCATCAAAGTGA10.8No Hit
CTGTTAAGAAGAAGAAGAAGAGTAGAAATCAACCCCTTGTGGTTTTAGCT10.8No Hit
ACTCTCTTATTCTTCGATTTCATAGGTGGTCTCAGATTGCAGCACGATTG10.8No Hit
AACGACACGTGCCTTTGGGAGCCTAAGCTCCTACTGAGGGTCGGCAATCG10.8No Hit
CTCATTTGTATGATTGAATATCAGAACTTAAACCGCAACCGGATCTTAGA10.8No Hit
TTTAATAATAGAAATAAAGCACTTTTGATAATAAAAAATAATTGATTTTT10.8No Hit
GTCTTTGCGTCTTCTTCGATCAATTTATCAAATTAGGGTTCCAACCTTTT10.8No Hit
TGTTGTGAGTATTAGCTTCACTTCATTTCGTTACAAGTGCAGGATTCCTC10.8No Hit
CCTCAAACCCACATCTTCTTATCGCCAAGCTTGTCTCAAAACTTTCTCAG10.8No Hit
CTTAGGCAGTAAATTTATCGACTGAAACATAATTGTTGGTGTAGTACTTG10.8No Hit
ATATTATACAGGTGCAAGCCTATCTGTTCGTTTAGGGTTTTATTTTCTTA10.8No Hit
TTTTTAAATTGGTTTATTCTGCTGCAGCGAACGCTAGTCACAATAAGGGT10.8No Hit
TCCCATCCCCTAGCGAGTGAAGTGCTTACGCTCCGGGGCGAGCAAAAGAG10.8No Hit
GTTACATTGATTGTAAAACAATAAAAAACAAAAAATATTCGTAGTTAGTA10.8No Hit
ATCCTACTGATTCTATCATTTTTGCTCGGTGTGATGATACTCTTTCTAAG10.8No Hit
GATTTAGATAAATGGGCAAATCACGACTGGATATATATTAGTGCTCTAGN10.8No Hit
ATTATACCCTCCATAATATTATGCGTCAAATTGTTCACAATGGAATCAGA10.8No Hit
GTTTTGNAGTCGAATATGACTTGATCTCATGTGTATAATTGAGTATCAGA10.8No Hit
GGATCAAACTATGTGGATTTCAAAAGTTTGTCTTGTGACTTATTCCAAAA10.8No Hit
GACCAGGAATGCTTATTCCCCATTTAGCGTCATCAATGGAATCGAGGACC10.8No Hit
GTCCAAATAGTAAATCAACTTGAGTTTCACAAGGTACTGAAAGTTCATTG10.8No Hit
GCATCATTTACTAAAATAGTGATTTCATTATTGCCTATTCTAGCAAAACC10.8No Hit
GAATCCCCGTGAGTAATCCATAATCAATTGTCTCATTCTGCTTTATGTTA10.8No Hit
ATATTTTTCTGGTCAAACATACTAACTCCTCAGTTAAAAGGTGGTCATTA10.8No Hit
CATATGAGTCTTTAGCTTTGTATCTTCTAACAAGAAAACACTACTTAGGC10.8No Hit
GTCCAAATAGTAAATCAACTTGAGTTTCACAAGATACTGAAAGTTCATTG10.8No Hit
ATTCAAAGGTTTTTTTCTTTCTTTAACTAACTACAAGGGTGATGGGTTTT10.8No Hit
GATCGCAATCAGATAATGGCTATAGTGTTGTTCTTCCCGAGAAATTGAAT10.8No Hit
GAATGAATCAAAGAACTGAATACGTTTCCAATACCGATAGCAGCTCCCGC10.8No Hit
GAAATTTACAGTTTTTGGTCAATATTCTTTCAATCTTTTGTATAAAATTT10.8No Hit
GCGGTTTAAGTTCTTATACTCAATAATACATATGACATCAAGTCATATTG10.8No Hit
AGTTCACATGAGTTAAAATTAACTTATGAGATTACAAAATATAGTTTTGA10.8No Hit
GAACAACCGAGAGTCTTGATTGCATCGGATACAGTATGTAGTTTTTGGTT10.8No Hit
GAATAGGAATGGTTTAAAGAAACTTGCAGGAGAAACTATCCAGAAAGAAA10.8No Hit
CCAGCAAACAACACACGTAGTAGATACACCGAAAGTAAGAAAAAAAAAGC10.8No Hit
TTCATGATGTTTATATGAAGCATGCATATTGATGATGGTAGGTAGTGGTG10.8No Hit
GTATCAAGTTCTAACACTAGGAACTGGAAAGCTGTCATGGAGAATGATCA10.8No Hit
GACCTGTATAACAATGGAGTATGGAGGTGGCATATTAAGTTTGGGTCCAT10.8No Hit
TCCGAATCCCTTTCAACACTTTTGTATTGAATAAAATATTAAATATAAAT10.8No Hit
GTAATGTGCACGGAACCAGGGCCATCGCAGAATTTGGAGTAGTTTTCTTG10.8No Hit
CTCCACAACACAAACNTACTTTCCCATCTCATGCCTTTGATTGCATAGAG10.8No Hit
CTTCTTCTTGCTTCTCAAAGCTTTCATGGTGTAGCCAAAGTCCATATGAG10.8No Hit
ACATGAATATTGCCACTAAAGTTGCTTTCGCGAAGATCCAAGTATCTTAG10.8No Hit
GATTTTTATAATTTTCTAAAGCGTACAAAAATTTTAAATATTTCTTAAAA10.8No Hit
ATACAGAACGTCTCGAAATAATACCTGGGGCAGGAGATTCAATTAACCGA10.8No Hit
GTATTTGCCATGGTTTGGACTTGAATTCTCGTTTTTCAAATGCTTCCCCA10.8No Hit

[FAIL]Adapter Content

Adapter graph