FastQCFastQC Report
Tue 23 Aug 2022
HNCMMDSX3_n01_chi_057.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCMMDSX3_n01_chi_057.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences83
Sequences flagged as poor quality0
Sequence length151
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTAAATAAAAAATCAACTACGTTAATAAAGATCATCCACGTGGCTACGA11.2048192771084338No Hit
ACATTCAATACAATGTAAAGCCAATTTCAGAGTATTCAAAAGCTCATCAC11.2048192771084338No Hit
ATGTGACTCGCACTGGGATCCCGAAAGAAGTTCTTTGTGTCCCCCGGGCA11.2048192771084338No Hit
GAATTCATCCATGAAAATGAAAAACAAGGGGGGTTGCTAAAGGGATGAAT11.2048192771084338No Hit
ATATATATCTATGTTTTAATTCCTCTACAAATAATTTTTTTTTTGTCAAA11.2048192771084338No Hit
CTATTTATCTTGTTCGTTTTAGTTTTAAAGGTTAATATCATGATTTATCT11.2048192771084338No Hit
ATATATAGTCGAGTACTTTTTGGGGCCGAGATGTCCTCTAGTCTATAGCA11.2048192771084338No Hit
ATAAAAAAGGGTCCGTTGAGCACCCTATGGATATGTCATAATAGATCCGA11.2048192771084338No Hit
GTAATATTTCTTGTATCATATCAAATTATCAAGTAACACCATGGCATTGA11.2048192771084338No Hit
ACCCAGACTTGGCAACGGGTCACCTGTCAGGACACTGCAAGTAGAAAATT11.2048192771084338No Hit
TAGTTTACCTTGCAAAAATTATGCATGCTTTTAACACATAAACTGTCCAA11.2048192771084338No Hit
GTAAAAATAAAAATAATTCTACAAAAAATAAATCCAACACCAAAAAAAAA11.2048192771084338No Hit
TTGTTATACTCAATCATACACATGACAACAAGTCATATTCGACTCCAAAA11.2048192771084338No Hit
AGTGTGTAACAGTCAAAACATATATATAAGAGTTACTAACGTAGAAACCT11.2048192771084338No Hit
CTCAACCCATATGCTGATGATCCCTATGCATTTGATTGAAGTCTACCTCG11.2048192771084338No Hit
CTTCACACCAGAAACAAAAACGAGGAACAGAGCCCAAACTCATCTCTATA11.2048192771084338No Hit
GTATGATTGAGTTTAAGAACTTAAACCGCAACCGGATCTTAAAGGCGTAA11.2048192771084338No Hit
AGTTGAGGCTCTACTCTCGGCGATGAAGTGTATAATTGGTGGCGACAATC11.2048192771084338No Hit
GAATTGGTATCCGTTGTTGGTGTTACTTCCACCGACGAGAACTGTACCAT11.2048192771084338No Hit
CTTTGGAACTATGGAATATNCGATTTCGTAAGTTTAGTGGGCAACTTTGT11.2048192771084338No Hit
ATGTAAGCCATAAGATATTTTAGATTTTTGAGTTGTGATAAGCGTAATGA11.2048192771084338No Hit
AGTTATGACCTACGAGATTCTATTTGTAAAAATCTAAGAAATCAAAGTAT11.2048192771084338No Hit
GGTTACTGTTTTGGAGTCGAATATGACTTGATCTCATGTGTATGATTGAG11.2048192771084338No Hit
GAACGTAAACCGCAACCCGATTTTAAAGGCATAAGAATTGTTTCCTTGGT11.2048192771084338No Hit
ACCCTGTTGAGCGTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGT11.2048192771084338No Hit
GGATTTTGGTTGNCTTGGACTCCTTTTGGCATGAAAACTGATAAATCTTC11.2048192771084338No Hit
CAAATATCCTTTACCCCGGAGAGATGAGTTGATGGATCAACTTGGAGGTG11.2048192771084338No Hit
TCTCTGACGTAGCGTTAACGTCCCGAACATGACCTATATATTTGACAGAT11.2048192771084338No Hit
CTATGAGGGTATATATTAATAAAACAATATTATATTTAAAAATAAATCAC11.2048192771084338No Hit
CGCACATTTCCCGCGGAGATTCGCCGAAGCAGCCTTATCCTCGAAAATAG11.2048192771084338No Hit
CTATTGGTAACTTGTACAATTCACATTCTTTGGCTCTACCCCATGAATAT11.2048192771084338No Hit
ATCAAGAAGATTTTGAACCAAAGTTCTAGGGTTTTGTTCATCCTTCACTG11.2048192771084338No Hit
CCCATAATATGTGGAAGTATCGACGTAATTTCATAGAGTCATTCGGTCTG11.2048192771084338No Hit
CCACAACAATAGAACGAAAAATTAGGTGTTTAACGTAAAGCTAGTAAAGA11.2048192771084338No Hit
GAGTATAAGAACTTAAACCGCAACGTTATCCTAAAAGCCTAAGTAGTGTT11.2048192771084338No Hit
TGTCAACCCAAGATGTATCTCCTTCTCCAGGACTTCGAAAAGGTACTTTT11.2048192771084338No Hit
TATTACTTCTTCCTCAGCTCCTCTTCGTCTCCTCTTTGCTTATGAGGACT11.2048192771084338No Hit
TAATTTATCTTCTCGTATATATATAGGCATTACACATCTTACTTATTACA11.2048192771084338No Hit
TATATAAATAAGAAGCAAAGAATCATCGCTTTCTAATTCGTGTGGATACG11.2048192771084338No Hit
CATTAGTTGGGATCTCCCATCCTTTCGGAACAAAATCAGCCTCTCCAGGC11.2048192771084338No Hit
GGATAAATATAGTCAACTTTGAATTCTTTAACACGGGAATATGTTCCTTT11.2048192771084338No Hit
ATATAAACCTTAAAACCTATATCGTTTAACTTGTATTGCTCTTCTCTTTC11.2048192771084338No Hit
GTTGTTGGTAGTCGGTACAATCCAAATAATTTATGCAGCTTCAACATCTC11.2048192771084338No Hit
TGGATAATCCAAGAAACAATGAGACTCCAACTATGGTTATGTTCCTAAAG11.2048192771084338No Hit
CTTCTTGCTTCCTTAGGGTACGTCCCCTATCGCCTTTCAGTCGGAAAAGC11.2048192771084338No Hit
TGCCCAACCTGATTATACGAACATCAACTCGGAACCAGCGTTGTGTCCAA11.2048192771084338No Hit
CGTTAAGAGAATAAAGTTGGCTCAAGGAAAAGGAGGAAACCGACTCTGTG11.2048192771084338No Hit
CCACTTACCAGCTAAGCTCCGTCTATTTAATTCCATCTTCCCATTTTAAG11.2048192771084338No Hit
ACTTTAACACCTTGCAGTGATCCCAAAGAAACGAAGCATTAAGCGATGAC11.2048192771084338No Hit
GTCATGATTCGATGGGTTAGGGCCACTTACTTTTTCTTTTGGATTTGTCG11.2048192771084338No Hit
GTTACTCGGAATGCTGCCAAGATATCAGTATCCTTGGTTTCATATTCAGG11.2048192771084338No Hit
GTCGATTTATTCCTGCCTGGATGCCTTGCATTTGCCACTCAAACTTGGTG11.2048192771084338No Hit
GAACAATCCCTTGATGAAGAAATTTTTTATTTTTATTTTCATGAATTCGC11.2048192771084338No Hit
ATTATAGAGTGATGACCATTGACCATTAAATTTTTCAAAAAATAGAAAAT11.2048192771084338No Hit
GTTTTTTCATGTTGTCAAAGTGTTGAACAATGGTTTTTTCGTGTTGTCAA11.2048192771084338No Hit
AATGGATTGTTGACTTCATCTCACAATTAAGCACACAACTAATTAGAAAC11.2048192771084338No Hit
GTCATTCAGACCACTTGGAATTCAGTTTAATTCTCAGTTCAGTGGTAGTA11.2048192771084338No Hit
CTGCATCATTTACTAAAATAGTGATTTCATTATTGCCTATTCTAGAAAAA11.2048192771084338No Hit
CCACCATACACCGGAGTCTCTTGTACCTATTTATCAACCAGTGGGAAACA11.2048192771084338No Hit
CAATTATTTTTGAGAAACAAAGAACGAACATAAATACGGCAACCAATCAT11.2048192771084338No Hit
CATATATATTGAACCCTTGGAATCAATATNATAGATTGGGCTTTATTTAT11.2048192771084338No Hit
ATATAATTCGTCTATATCTATATAGAAATAAAAGAAAAAGAACATGTTGA11.2048192771084338No Hit
TTGCAGAGCTTTTATGCATAAGAGGAAGTTTTATGAGCTTCTCCTTTAAG11.2048192771084338No Hit
CCTTTTACCACGATTTGATATGACGAAACTGATTTCTCCCAAACCCGAAC11.2048192771084338No Hit
AAATATATAACAATTACAATATCAAAGAAGTAAATGACAATATACTAACA11.2048192771084338No Hit
GTGTAGGCAAAGTCCATATGAGTCTTTGTCTTTGTGTCTTTTAACAAGCA11.2048192771084338No Hit
GCTTAGGACTGCTAGAACACACCAAAACCTGTTATTGCTTGGCTTGACTT11.2048192771084338No Hit
ACAAAAACCTGAGCTATCCAATCTCCTACAGAGTAGACAACTCCACTAAT11.2048192771084338No Hit
ACCTTATTCTTGCTTTTCAAAGCTTTCATGGTTTAGCCAAAGTACATATG11.2048192771084338No Hit
GTTCAAATTAAGGGTTTTGAAATTATTCGCCGTCGCCGATGTCGGGAAAC11.2048192771084338No Hit
CCCAATAGGTCCAGCATACATTCCTCTATCAAATGACTCTGGAAAAAGAA11.2048192771084338No Hit
ATATTCCCCTTCTTCGTTTCCTAAACATGTCCTTGCTTTATTGTGGCATA11.2048192771084338No Hit
CCCATAGCTTACAGAGTTTTTAATATTTTGCTTTCAAGATACATATTTCT11.2048192771084338No Hit
GATTGCTAGCATCACACCCATTTGGATTGACAACCTTCAGTAATACAACG11.2048192771084338No Hit
CTACTTGCATAGTGTATATACACACGTATGTATTTGTTTCAGCGAGACAT11.2048192771084338No Hit
GCGTCGGGAGAGGGTAGGCCATCGCTTACCGGTGTGGGTAGTGCTGCACC11.2048192771084338No Hit
ATTTTGATTTTTCCAACAATTCAAAAGATCCAAAAAATCTTGACGTATGA11.2048192771084338No Hit
GTGATGAATATAAGCGCAATTGAAATTCCTGGGGAGTTATACATTTGTGT11.2048192771084338No Hit
GAATATTGAAAATGTAGCTAAGGAAATAAATATTATTACATTTGTTAAAA11.2048192771084338No Hit
GTCTCACACCCACCCGCGTTTTTATATTCTATCCTGTGTTCGACTGTTGA11.2048192771084338No Hit
ACTCTGATGATGGAGAAGGTGGACACAGTGGTGGTGATGATTCTATAGAC11.2048192771084338No Hit
GGAGGGACATGTCTTCTCAAGAAAATTTATAAGTATAATTTTAGAATTCT11.2048192771084338No Hit
GTTTTCGACTTTTCGGAAATATATTAGCCGATGAATTAGTCGTTGTTGTT11.2048192771084338No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)