FastQCFastQC Report
Tue 23 Aug 2022
HNCMMDSX3_n01_chi_055.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCMMDSX3_n01_chi_055.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences113
Sequences flagged as poor quality0
Sequence length151
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATCAAGTCATATTCGACTCCAAAACACTAACCAACCTTCTTCTTGCTT21.7699115044247788No Hit
GGATACAACAACGTATTGGACCTGAATACGCCGGCCCGTTGGGAATTCTT10.8849557522123894No Hit
TTCTTTAATAGCTTCCTTTTGAGGGTTTCTATATGTGGTACAATAAAACT10.8849557522123894No Hit
TGGAATTTCTATTCTGTTTACTGAATCACATGAAATTTTATCCAACTCCA10.8849557522123894No Hit
CATATTATGGGTAACGTAGGAGACATCTCTATATTTCCCCGGGGGAATCT10.8849557522123894No Hit
TAGGAGAACTCAAGCTGGAGCATGAAATACATGTATCAAATGGAACCATC10.8849557522123894No Hit
GCATTACCAATTGCATATTTGGTCAGAGACTCACAGGGTTAGTGCTACTG10.8849557522123894No Hit
GGTAATAATATCAGCCCAAGTATTAATAACAAGTCCTTGACTATCAAATA10.8849557522123894No Hit
CCTTAATAAAATTCTAAAATCACTATTCAGAACGAAATCAATAAACCAAT10.8849557522123894No Hit
GTGTTAAACAGCAACCTCTGCAGGGATGCGGTTACTATTTAATACTGCCC10.8849557522123894No Hit
GACAAAACCTTCAGCTCTCGAACCTCCTTTGCCCGGTTCACATACGGAAT10.8849557522123894No Hit
CTGCTATCCGTGGGAATCCGCCGATNAATATCACGATATTCACATCTTTA10.8849557522123894No Hit
ATTTTACCCTTTATTAGTTATATACATTAACCCGTCAAAAGGACATTTTT10.8849557522123894No Hit
CCCTACGCACAAGCAAAGTTTTAAGCAGCTCTAACATGGAAANGCTGATG10.8849557522123894No Hit
ATTCACCACTAGGCAGCAAGAGTTAGGCCAAACTGTGAAAAAAAACAAAG10.8849557522123894No Hit
GATTTTATGCAGGGCAATACTACAGGCGGCACTGATGGTGATGCTAAACA10.8849557522123894No Hit
CCATTAAACAACTTATTAGAAATACAAGACAGCCAATCCGAAACGTCACG10.8849557522123894No Hit
CCCAGAGATTCTTAATCGGATCTGACTTTCAAACTTCATCTACTTCTCAG10.8849557522123894No Hit
ATTGAGTATAACAATTTAAACCGCAACCGAATCTTAAAGGCGTAAGAACT10.8849557522123894No Hit
AGCTTGAACCACTCCGGGGAAACATTTGGATATTATACGATCGGACTTCT10.8849557522123894No Hit
ATATATCAGAGAAGATCCAACATAAAGGTCAGACCCAAGAGTGACATCCT10.8849557522123894No Hit
ATATGATATTATCATAACAACGAAAATTCCAATTATGTGACCATCTAGTT10.8849557522123894No Hit
GATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCG10.8849557522123894No Hit
GGTAAATATGATGGCTCACTAGGCATCATTTCTGCAATCTCTGCATTGAA10.8849557522123894No Hit
ATATTGTATTTTCTGAGGTTCATATATTTCCATCTGATTTGAACTAGAAT10.8849557522123894No Hit
ATAAAATACCAAACTAACAAAAAAAAAAAAACAATAGATGTTAATATAAT10.8849557522123894No Hit
GAAATATATAGGGCTTACGAAGCCAATATCTAGATAAGTGATATAGGAAC10.8849557522123894No Hit
AACCCTAAGACATAGACGAAATAAGAAAGAATCCTACAAAACTATATTAA10.8849557522123894No Hit
GATCAAATAGGAATACTCTTTGCAAAGAGGTGAATGATAATGTTTCAGAG10.8849557522123894No Hit
CCAATACGTAACAATATATCAGCAGAGATATTCAAACCAAAAAGGAAAAA10.8849557522123894No Hit
CTCCTTTACGGGCTCCATAGCAAGAAATAATATATTCTGTTAAAGACAGT10.8849557522123894No Hit
GGATGAAACAGAAAAATAACGTCTCTTACCACACCTCTTTGGCCATGCCT10.8849557522123894No Hit
GAACTTATACTTATTAGATCTAATAACTAAATTAGACCTAATAGAATTAT10.8849557522123894No Hit
AGTATGGATCGTACATGGACGGTAGTTGGAGTCGGCGGCTCTCCTAGGGT10.8849557522123894No Hit
GTTCATATTAACACAACTCTATTGACCCCTTCTTCTTGAGGTCTAATGTC10.8849557522123894No Hit
GTTGTAATTTGATTGTTAATTATAGGATTCCACTTGTAGTATATTGTCTC10.8849557522123894No Hit
TCTACAGTCTCCAAAATCAACAGCTTGAAGTGATATTTGACCTATATACA10.8849557522123894No Hit
GAAATATGTAACCATTTGCAGCCAACTATAATAGCCTAACTTTGACTCTA10.8849557522123894No Hit
GTTGTGAAAGTCTGGCTTCTCTAACACCAGCTACTCTAGATCGTTTGTTT10.8849557522123894No Hit
CCTCCGGAATACGGGCAAGCTTCGGTTGCTACTTACAAAGGCGATGTGTA10.8849557522123894No Hit
TAACTTTCACAAATGAAATTTACATGATTTGATGATATAAAGTTGAGAAG10.8849557522123894No Hit
GCTTTCGGCAGAGCAACCACACGTGTAGGGATAATCTGTAATATTGATTT10.8849557522123894No Hit
ATAAATGGATGGATAAAAAAACCAGTTTTCCTTATTCCAGGAAAAAAAAA10.8849557522123894No Hit
GTCATACATTTACATCTATAACATAGATAACCATATATACATTTACATTT10.8849557522123894No Hit
TATCTTCAGTGCCACCATTGATCTTGGTAAGGCCACAGAGCCTATCAAAG10.8849557522123894No Hit
GTCTTGTTCTCATCCAACGGTCACCTTTTTTCCGTGGTCACATGATATTT10.8849557522123894No Hit
GTAGAGCGGTCGGCTGTTAACTGATTGGTCGTAGGTTCGAATCCTACTTG10.8849557522123894No Hit
ACAACGTCCATGCACATTGTATCAGAGAAGCTGTCTCCGGACTGAGATTG10.8849557522123894No Hit
CCTTACGGGTTTGCTCACCCGTTGACTCGCACACATGTCAGACTCCTTGN10.8849557522123894No Hit
ATTAACAACTAATGTATGTAACCAAAGTCTCAAGCAACAAATCAAAACAA10.8849557522123894No Hit
GGAAAATGGTCAGATGGCAGAAGTTAAGGCAAAACTAGATATTGTGCACA10.8849557522123894No Hit
AGTAAAGACTCTGGGTTTCCAGCAAGCCACTGCTACATCCATTTCATTAG10.8849557522123894No Hit
ATATGTTATATCTCTATTTTTGTGTGTATGAAATGGATAACACGATACAT10.8849557522123894No Hit
CCATCGAGGACTTAAAAGCGGAAAAGGCCAAAACCGAGCAGGTCAATGCT10.8849557522123894No Hit
TTAGAAATCGACAAATCCAAAAGAAAAAGTAAGTGGACCTAACCCATCGA10.8849557522123894No Hit
GTATAAAAGCAATCTTGATGAATGGGAATCTGATCNGAGAGTGAAATGTG10.8849557522123894No Hit
TCTTACTACTAACCATACTTCCTCTTGTTAATTGCCGTATCTCTTTAAGA10.8849557522123894No Hit
ATATATATGTGTGTGTGTGTGTTGTTGTGACTGGAGAGAGAGCAACACAT10.8849557522123894No Hit
ACACAAAACCAAAGACTCATATGGACTTTGGCTACACCATGAAAGCTTTG10.8849557522123894No Hit
GTATAAGTCTGGTGGAAATTCATTTTCATTCGGTTGAAAACAATTATAAA10.8849557522123894No Hit
TTATAACTCATTAGTTTATACTAAATTAATTAAAAATAGATCAATAATAA10.8849557522123894No Hit
GGTTATTTAGAGCATTAAACATCTCGACAACAACAAGTACTGTCATAGCC10.8849557522123894No Hit
CCCGTCCCCGTTCTTGTCGAACATTTGGAACACGCGTTTTAGCTCTGTCG10.8849557522123894No Hit
AACGCAGACTACTCCAAAGTATCACCATACGTTGATCTTGGTGAAACCCT10.8849557522123894No Hit
AATATATACTAATTCACGTCTCATGTTTAGTTTTGTTTCTCTTGTCCTCA10.8849557522123894No Hit
TCCATGCCAACTTCTTTGGTCGGGACAGGGCAGAACCGTGTCATTGATGC10.8849557522123894No Hit
AGATAATTGTTTAGTATCTTCATTTCTACAAAAATAGAATATTCGGGGTA10.8849557522123894No Hit
TTGAGAAGATGCTTGCTCACAGGGATTTTGTTCACGAACACCATATATTC10.8849557522123894No Hit
TCCGAGTCCAGGGCCTTTTATCCTTACTTCAGCTCGTTGCATACCTTGAT10.8849557522123894No Hit
ATTATCTCTTTTAAATGATTTTTTTATCCTGTCACAAAAAAAAACATATC10.8849557522123894No Hit
GTGTTTAGGATCAAATATAGTATGATACTTAGAAAGGCAAGANGAATCTT10.8849557522123894No Hit
AATCAATCTCACCTATCAGAAAGAAAAACAAAGCGGTGATTAAATGAATC10.8849557522123894No Hit
ATGTTGTTCCTGAACATGAAAGTAATCAGCTTGAGAAGTCAATATCAAAC10.8849557522123894No Hit
ACATGAATCTGTATATGCTGGATGCAGAAAAATACCAAATTTCTGGTAAG10.8849557522123894No Hit
CATGTGTATGATTGAGTATAAAAACTTAAATCGCAACCAGATCTTAAAGG10.8849557522123894No Hit
AAATAGTAATATACATAAAATACAATTTTGATTATTTCTTCAGTGAAATC10.8849557522123894No Hit
CATGAAAATTTGCCTAAATAAATCAGCCAAATAAAGCTATATGTTAGTCG10.8849557522123894No Hit
GAGCAGACATGGTGAGGAAGCTAGACAACAAACTTTGGCAGCTGAATTTT10.8849557522123894No Hit
TGGCTACACCATGAAAGCTTTGAGAAGCAAGAAGAAGGTTGGTTAGTGTT10.8849557522123894No Hit
CTTATCATGTATTATCACTTTCTCTAATCATTTTAAGTTAAATGAAGAAA10.8849557522123894No Hit
TATCTCTCGTTATTTGGGACCCTATTCACCTCTTTGGTTGGACTTCTATT10.8849557522123894No Hit
ACCTGGATCTGGGAGCTTTTTAGTGGTCTAACCTGGATAGTGCGGATGTA10.8849557522123894No Hit
GTATTTTAGTTTTACTGCTTCATGGTGTCTTCATAAATAGATGCGGCAAT10.8849557522123894No Hit
GGGTAATCCTTACATTATTATCAAATCAATTGATAATCTATTTTTTACAA10.8849557522123894No Hit
ATACAATACTTCGGCTTTTAAGATTCGGTTCCGGTTCTAGATCTTATACT10.8849557522123894No Hit
AACCCATGGTTATAGACTCGAATCCATTAGTATGGAACATTTTCTTTTCC10.8849557522123894No Hit
GTCTTTGATGCATTAGGCTCTTTATTTGTAAAATATATAGGTTTTGTTGT10.8849557522123894No Hit
AGTGAAGATGATCGACCAGAACTTAGTAGAGGTTTTAGATGAATCCGGTT10.8849557522123894No Hit
CTGTTCTTGAATGATGCAGAGATGCTCTATTTAAGGCGGCCATGAACATT10.8849557522123894No Hit
AAACTAAAGGATTCTGAAAATATATCAAAAGTGGCCCAATAGAAGCCCAT10.8849557522123894No Hit
CAATTTAACTGGTCTTGCTGACAATGAAGGAAAAGATGATATGGGTCATT10.8849557522123894No Hit
CATTGTTATCGTCCTCGTCTTCATCACTCTCAACATTAACAGCACATTTT10.8849557522123894No Hit
CTCCTAGAGGGGGATAGGGCTAAGCGGAGCGAAAAGGGTTTTCCATGAGA10.8849557522123894No Hit
CATGCATATTGTCTGTACATCGGGTCGCACAAATTGCATAGTATCATAAA10.8849557522123894No Hit
ATCTATAACATTAAGGTGTTCGGAAATGGTTGAAGTAGATGAATAGGAGG10.8849557522123894No Hit
CTTTGCATACAATNACATTAGACATCATGTACTTTCGGCACATGTCTACA10.8849557522123894No Hit
GTATCATGTAACCCATCCTTTGGTAATTCCAGTGTCCATGGACGAGCAAT10.8849557522123894No Hit
ATGGCTAACCGATATGGCACATCATCATTTAGCTATCGCAATTCTTTTCC10.8849557522123894No Hit
GTATGATAAGAATACGCATGTATACGCGATTTCCAATTCCTTAATCATAA10.8849557522123894No Hit
GTCTCATTATTGCCGAGATAATGGCCTACTTCTTCACATCCACCGTGCAA10.8849557522123894No Hit
ATGTATAATATCTTCGCTCTCAATAATTACAGACAAGTCTATATAACATA10.8849557522123894No Hit
ACCAAACACTTTCACACTCCCCATCGTTTTCTTGTTTTGCTTTGGTGAAT10.8849557522123894No Hit
GTCTAAACACTCCTAATCTATCTCTAACTCTAATAATTAGTCAAATGTAT10.8849557522123894No Hit
GTGTTATGTGTAACCTCTATATTAGAGAAGCTTTTCAAGATTCAGAAAAG10.8849557522123894No Hit
GATGAAGAAAGTGAGAAGGAAACTGTGTGAATTAGAGATATATTTTGATC10.8849557522123894No Hit
GTTTTATTTATTACATATTCGTCCCATTGTTTTGTTGTAATACACGATTC10.8849557522123894No Hit
GCAATATTGGAAAAGAAACAGTTAGTACTGANTTATCACCTCATCAGCTA10.8849557522123894No Hit
CACTTAAAGATCGTTTCGATCATAAAAAATATGTGATTTTGCCTAAAGCC10.8849557522123894No Hit
CTATTAATGCAAATAGTGGGATGTTGGGTACGATGAAAGAAATAACTGAT10.8849557522123894No Hit
ATAATAGAGATGATGATACCTGCACTTTACTTGTACGCATCCTTTAGAAA10.8849557522123894No Hit
AATAAATAATGTGGAATGTAAGATAGTGAGCTCACAAAAACAATCACAAA10.8849557522123894No Hit
AGATAGGACTAGGTGGGCGCTTATACTTTGGGCTGGGATGTGTTTAAAAG10.8849557522123894No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)