FastQCFastQC Report
Tue 23 Aug 2022
HNCMMDSX3_n01_chi_041.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCMMDSX3_n01_chi_041.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCTTCCCCAAGAGCTCACATCGACGGGAAGGTTTGGCACCTCGATGTC21.9801980198019802No Hit
CATTAAGCCTCGTGGATATCATGGGATAACACAATAATAATAACAGGCGA10.9900990099009901No Hit
TCCCATGATTATCCTTGTAAATAATTTTTACTGTCTTGTTATTTTTTATT10.9900990099009901No Hit
TATTCACCGTTCTCCAAGTGTCGTTGAGCTGGTCGGAGCCTAGAATCTGT10.9900990099009901No Hit
ATGTATATCTAAACCTAGATCGAAACTTCCGATGGGAGTTGGTGGTAAAG10.9900990099009901No Hit
CCTTTAGAGTTATGCACCATAAGATAGACCATATGCTTCTGATTCTTAGT10.9900990099009901No Hit
ACCAATAATATGCGGGATTTTCTTAACTAACTATATTTAGTCATATTTCA10.9900990099009901No Hit
GCATCCCGATCTTATAAGCCTAAGTAGTGTTTCCTTGTTAGAACATACAA10.9900990099009901No Hit
CACTTGACCATTCACTCTACCAAGTTACTCGACCCCCAGGTCGAGTATCA10.9900990099009901No Hit
GTCTACCGCGGGATAAAATCTAGTCTCTATAGATGTTCAGAGCAATAATT10.9900990099009901No Hit
ATTGCAAGTTACGTAAACCCATCTCTTCCCTAGATTCACTTTCTGCAAAT10.9900990099009901No Hit
ATATATGCTGGTCCAGTGGAAATTTGATAAAGCTATTAGACCATGAAAAC10.9900990099009901No Hit
GGAACTTGGCAGTGTACCTAAAAAGTAAAACAAAAATAAATATGTTTCTA10.9900990099009901No Hit
GAGGTGGCTTGTCATATTCAGCGGGAATAATGGTACGTCTATCTATGTTT10.9900990099009901No Hit
ATAAAAGAAAACAAATTCATTGAGATAAAAAAACAACATTCAGAATCAAA10.9900990099009901No Hit
GAACTTAAACCGCAACCGGATCTTAAAGGCGTAAGACTTGTAGACTTGTT10.9900990099009901No Hit
CTTATAATCTCTTCGTCTTTCGCTTTCAGCTTTTTCAATATCGCGTTTTG10.9900990099009901No Hit
GTTGAATGTCAATGTTACGAACTTACCTAAAGATACAAAAATGAAAAGAC10.9900990099009901No Hit
CATATTTTCAGATTAACGTCAAGGGTTTTATATGGGCCACTCATTCTTAT10.9900990099009901No Hit
ATCGTGTTACCTTGCAGATTGGGCGAGAAGGATCTTTCAAGCTGTCTCTT10.9900990099009901No Hit
CCTCTTCAATTATTCGACAAACTAGCAATTTCCGCATCTCTTACACAATT10.9900990099009901No Hit
ATATATGATCACATGGATTATCTACGATTGTGCATCTTATTGGTGTAGTA10.9900990099009901No Hit
GTTTAGTTGGGATCCAAAACTAAAATGTAAAATTTAAGTAAATAAGTAAA10.9900990099009901No Hit
TAATGGTCCTGCTCTCCACTGCGGCGTTTTCTGAACTCCACAATGACCCC10.9900990099009901No Hit
AAACATGGTGGCTTGAGTTATCATATCATATACAAATTCTGAGAGAAAGA10.9900990099009901No Hit
GCATAAGACAGAACTAGGTCTCCTGTCTGCAGACAGACGATTATCAGCAG10.9900990099009901No Hit
TTTTAATGGTTACATAATCAAATTAAACTGATCTACATGTTAATAATCTA10.9900990099009901No Hit
ATCGTAGATGAGCCTAGTATTTAGATGCGTGCTNGCNTCCATTACTTAGG10.9900990099009901No Hit
GACAACAAGTTCAATAACATATTAATTCACTACCGTGATAGAAATCCTCA10.9900990099009901No Hit
GTCACTGACTTGCGTTACCGCGGATCTGGCATTACAGAGTCTAAACGCTG10.9900990099009901No Hit
CTCCTATCTAGTCCGAAAAATACGAACTAGAACTACATGAGACACTATCT10.9900990099009901No Hit
GGAAGATATATCCTTCTATCAACAATATGAAGAATATTTAATGTATTTAA10.9900990099009901No Hit
GCTTTAGTCGGTGACTCTATGCCCTCTTCCTTCCGCTTGCCACCGTGATC10.9900990099009901No Hit
GTCCTGGTCGACGAATCCTCGGACCCGGTCGATGAAGTCTCGGACCCGGT10.9900990099009901No Hit
GAATTAAGTGATACTCAATTTAATGGGCTTGGGCTTTCTTAACTTCTCAT10.9900990099009901No Hit
CAATCAATATTATGTTGGAAATATATATGAGTCAATAATTTTCAGTATCA10.9900990099009901No Hit
CGCCTATGCTTCTTCCCACCTTCCTGCACATCCTCTTCATGATTCTCAGT10.9900990099009901No Hit
GAAAGTGTCCCTCGCAAATATTGCTACGGTTGTGCAACGCGCGTCTATTT10.9900990099009901No Hit
CAATAATTGTCCCCGTTTAGTTGCTCATGTGGTTCAAGATGATGAAAAAG10.9900990099009901No Hit
CCTCAAGTCTCTGTCTAAAGACTTGTCATAACCCAATCCAATGTTTTGTC10.9900990099009901No Hit
GGTTTTGCTTCGGACAAAGCTCTATCCGGTGGCCATATTCCCCACAGTCA10.9900990099009901No Hit
GGTTCCATCTTTGATTGCAGCTATCAGTTCAGCCAACTCTTGGGGAGTGA10.9900990099009901No Hit
TCTGAAATGGTTTCACGGGATTCAGCCAATTGTCTTGATCGTGGGATACG10.9900990099009901No Hit
GAGATACGGTGTATCGGCTAATTCACCTCAGCCTCAAGTTGTTCATAACA10.9900990099009901No Hit
GATACAAAACATTACCAACTTTCAAGTAAGGAAATAAAAGAAATATTTCT10.9900990099009901No Hit
GTTGGATCTACATTGGATCTCACCTGAATCGCCCCATCTATACTCCTGAG10.9900990099009901No Hit
CTTCTAGGCACCTTTAATATTTGATTACGACGAAAAGGCTTATGTGAATC10.9900990099009901No Hit
GCTTACTAAGAACATCTCATTTTAACTCTTATATAAGAGGCATTTGGTCA10.9900990099009901No Hit
GATTAAGATATGAGCATAGAGTTGAGATGTTTTTCCAGAATTTGTGTGTT10.9900990099009901No Hit
CTACTATATGTATCATAACATGTTAGATTTCTGTTTTCATTGCTGCATCC10.9900990099009901No Hit
TACTTATAAGGAGCTTCTCCTTCTCTTAGCTAACCAAATCAACTCCTTTT10.9900990099009901No Hit
CTGGAATATGGCGTCAACTGCCTTCCCACTAAATATAACGACCATGTCAA10.9900990099009901No Hit
GTAGTCAAAGTCCATATGAGTCTTTGGCTTTGTGTCTTCTAACAAGGAAA10.9900990099009901No Hit
CCCTGGAAACGGCTCATGCGGAGGTAGGGACCAGCGGCTGGAAGAGCACC10.9900990099009901No Hit
GGTCACATCACATCATTGACCTAACTGACCACAACTCGTGCACATGAAGA10.9900990099009901No Hit
ACCTCTTTGGGCTTGAGTCTGTAAAAATGGGACACAGATCATTTGATTAG10.9900990099009901No Hit
ATTTTTTTGGTTGCTAGATTCGAGACGAGCCAATATTTTGTGGCTTTCTG10.9900990099009901No Hit
AACAACTGCATCTAATATCCATTCATCTATTAACACGACATTTCACAAAT10.9900990099009901No Hit
GAATTGTCGTGGTGCATCGTGATTTNGTTTATGGGGTTCTGCTCGCCGGT10.9900990099009901No Hit
ATCTTTGAATGGACTGGAATTTCAAACTTAGCTCTGGTTATTTATCTGGA10.9900990099009901No Hit
TTTGAATTCCATATTCGAAGTTGCGATCAGGTCTCTTCATTAAAAAGAAT10.9900990099009901No Hit
CACAATGGTAAAGTGTTAGCCATTTCGTCGACGCTACACCTAAACGGCAT10.9900990099009901No Hit
CTTAAACAGTATGACTCTGTCTTTAAGACTCAGTTTCAGATAGTAATAAT10.9900990099009901No Hit
ATCTAACAGTTATATTTGAACGAGATAGATAGACGAGTATTAGACTGTAG10.9900990099009901No Hit
ATGTGATACGATGAGATAGAATGCAATAGAAACAAAGACACAGGGAACGG10.9900990099009901No Hit
AGCTTAAACCGCAATCGGATCTTAAAGGCGTAAGAATTGTATCCTTGTTA10.9900990099009901No Hit
TTTTCCTCAGGTATAATTACCTCCTCCTCTATTATCGATCGATCATGTTT10.9900990099009901No Hit
CACACATATAGAGAAAGATACACTCTTAACAGAGTTGAATTTGAGTGTTC10.9900990099009901No Hit
GATAAATGCTTGGATTTTTGTGATTATTTTTTAACAGAGGTTGTTGAATA10.9900990099009901No Hit
AAACTTAAATAATCATATCAAAAATGCACCGAGGAAAAAAAAAAAGGATC10.9900990099009901No Hit
AATTTAATGACCAAGATTAACTATAAAAAAAAAAACCACAACAATATAAA10.9900990099009901No Hit
GGTTTCGATATTTCCAATAATTAGCAATCGTGTATCTTCGTTAGCATCAA10.9900990099009901No Hit
ATTATATCATTGACTTGTCTCTTTGTTTCTGATCACTGATTCAGTCTCTC10.9900990099009901No Hit
CAATTCGAACGCCGAAGACGTCCGATTTTCAAGCTGGGCTCTTCCCGGTT10.9900990099009901No Hit
ACCAACACAGTCCTCGGTTCTTGGAGCAGAAGCTATTTGCTTAGCTTTAC10.9900990099009901No Hit
GACCAGATCCTATACAAGAAGATAGAAGTAGTAAGACTAATGTTAATTGC10.9900990099009901No Hit
AGTATGGATCTCCTTTAGCTGGTGAGAGGATTGATATACCCGATAGCAAT10.9900990099009901No Hit
TCATTTCAATCTCTTCACCCGGAAGACTTGTATTGTAGTATCTTTTTAAN10.9900990099009901No Hit
CTTTGATAGTTTCTTCGCTATGTACATTGCTACAGAAGCTGATGAACGAA10.9900990099009901No Hit
TGTAGAAATAAATATAAGAGTGCATAACTAAATTTTTTTAATTAAAAAAA10.9900990099009901No Hit
GATTTTTCAACATCAGTCGGTTCGGACCTCCACTTAGTTTCACCCAAGCT10.9900990099009901No Hit
CGCGTATATTATTTACCTTCCTACANAACGGTAAGCGTATGTTCTACTCC10.9900990099009901No Hit
GGGACCCACGGCGAACGGTTCATCAAGACTTAAAAAAAGAATATATACGA10.9900990099009901No Hit
ACATTATATCATATCATTGCCTCACTTTATTACATTTTTTGTAACGTTAC10.9900990099009901No Hit
GGATAGAATTTTGAAGCTTCAGGTATTCTCTAAACTCTATCTGCTCATTG10.9900990099009901No Hit
CTTGTATACATTTATCCTCTCCCACAACGTGCAAGAAAACATTGGAGATC10.9900990099009901No Hit
CGATTCATACAAGCTAAATCTTCTAATTTAAAATTGGGCCAAAGAAAGGA10.9900990099009901No Hit
CGCTTATTGATATGCTTAAACTCAGCGGGTAATCCCGCCTGACCTGGGGT10.9900990099009901No Hit
GCAAGAAGAAGGTTGGTTAGTGTTTTGGAGTCGAATATGACTTGATGTCA10.9900990099009901No Hit
CTCAACCTCACCTTCCTTGGCTACAAAACGTTCGGGTTTAAACTCCAACG10.9900990099009901No Hit
CCGAAGGTGCTCTTCCAGTCCACAAAGCAACCATGGTGCCTCGTGGTATG10.9900990099009901No Hit
AATTTAACACATTCAGCATGTCCTGTGAAAAGCATAGAGAAAGCCATTTC10.9900990099009901No Hit
GTAAGACACAAGTTCAAGCATCAACTACATTGTCGTTTCTCGAAATATTG10.9900990099009901No Hit
GTCCTTTCCTCAGCTTCATAACAATCAGGAAGAAGCTCAACAGATTCACC10.9900990099009901No Hit
ATTAGAAGATGGATTCTGGCTGACTTTCTTGGATTAGTGTTAGACAGGGA10.9900990099009901No Hit
GAACTGATGACTCATTCACTTCACTCCTACTGATACTACTCAAAAGATTA10.9900990099009901No Hit
ATTTAGCAGAAGTACTGCCTCTTGTGAATCACTTTCATAGCTTTCATCAC10.9900990099009901No Hit
CGATAGGAAGTCCAACTCCAGCAAGAACTCCTCCGGTGTCGGAGTTAGAG10.9900990099009901No Hit
ACATTAAATTTGGCAAGATTCTCTGCCTAAACAACGTAAACACCACTAAA10.9900990099009901No Hit
GTTATTATACCTATCAAAGATATTATATACATTATAGAAGGGATAACGAT10.9900990099009901No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)