FastQCFastQC Report
Tue 23 Aug 2022
HNCMMDSX3_n01_chi_035.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCMMDSX3_n01_chi_035.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences155
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTTGAGCAGGAGAGAACGAGCAAGTTTCGAGATCGATCACAGCGAATC21.2903225806451613No Hit
TAATCAGTCTTACTATTAGCATAATCAACTGTTTATGTACTGATGTCTTC21.2903225806451613No Hit
ATATTACCCAAATTATACAGAAACAGAATATTCATAATATGACACAAAAA21.2903225806451613No Hit
CTATTAAAAGAGCTTTGTCATCTTCTTTAACAAAATCTTTCGCAATTTCC21.2903225806451613No Hit
GTATTTGACGCTGGGATTTGCATCAATGGTGTTTTGTATTATCTCGGTAA21.2903225806451613No Hit
AAGTAGTGTTTCCTTGTTAGAAGACACAAAGCCCAAGACTCATATGGCCT21.2903225806451613No Hit
CATATACTCATTTAGCTATAAACTTATTGGGTAATGAGTTGAGTTGAGTT21.2903225806451613No Hit
GCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGA21.2903225806451613No Hit
TTTTTCGGTGGCTGTTGGATGGACGGCGGTGGCTTCGAAGGTTATATTTC21.2903225806451613No Hit
CATCTTAGTCAAGTCACCATATAATAATACAACAACAAATAAAAACAATA21.2903225806451613No Hit
CGATCGATACGATGACTGGCAAAGTCGTGCATGGCTTTCAGCTGTTCGCG21.2903225806451613No Hit
AATATTTGTTTCTTCTTCTTATATATTGACAATAATGTACATGCTATTTC21.2903225806451613No Hit
ACCTTGGACAAAACCATTCCCAAATAGCCACCACCACACCTGCAACACCT21.2903225806451613No Hit
GATTTTATTCACACATTGACACTTTTTATGGTCCATATAATTTCGATAAG21.2903225806451613No Hit
AGCCGAGTGTTAAGCACGTGACCTCGCTTCGCGGCTCGAAACGCAACCAG10.6451612903225806No Hit
CCGATTGTCCGCGGTAAACCACGGGTTAAATCCTAGTTGTTTTTAAACTT10.6451612903225806No Hit
CAACCGGCCCAAAAGGGAAGGACCTTTCCCTCCGGGGGGGTAGGAAAATC10.6451612903225806No Hit
AAGCACGAAGAGTACTTGATCAACCTCTTCCACATCCAGTTTCCCGAACC10.6451612903225806No Hit
CAATCATCTGATGAAGTATCATAAAAAACTTCGATTCTTTACAAAAAGAG10.6451612903225806No Hit
GATAAGCATCTCATTCCATCGTCTAACGCTGTGGAGTCAACTGTCTTTTT10.6451612903225806No Hit
ATATTTCACAATATTCATTTCTTTAACTATATAGTTCTCCCAATATTTCA10.6451612903225806No Hit
CGACGACGGCACCGTGCTCACCAGCAACGGCTCGGACACCGGCTTCTGGG10.6451612903225806No Hit
GTACTAATTCTCTTTAATCTTATTTAATTTGATATTTATTTAGATGTTTT10.6451612903225806No Hit
GATACAATTCTTACGCCTTTAAGATCCGATTGCAGTTTAAGTTCTTAAAC10.6451612903225806No Hit
ATTCTTAGTTTTCCTGGATCCGAGATTATCACGTTGGAGATCCTGTGTGT10.6451612903225806No Hit
CCAGTGTCCCCTCTCTTCTGCGAGATTCCCTCAAAATTTATTACAAAGCA10.6451612903225806No Hit
AAAAAGCAATGTAATCATCACAGCTGTTTTAAATCGTCAAAGTAGTAGAA10.6451612903225806No Hit
GCCGGAATTCTGCATAAACCAAAAGTTCTATTTTTAGATGAACCAACCGT10.6451612903225806No Hit
GATGATCCCGTAGCAGGTGGTGACAAATTTCAAACCACCAGATGATCTGT10.6451612903225806No Hit
ATCCAGGATATCCGCCTGAAAACTGGGTCGAAGTGCTCGAGGGTATTCGT10.6451612903225806No Hit
CTGAATGACATTCTCTCTGTGCCTGGCAGAGAAGCGTGGTGTTGTGTGTG10.6451612903225806No Hit
GTGTAATACCACCCCTGTTCAAAAAAGTTTCGGATGTTTTACTTCGAATG10.6451612903225806No Hit
ATATTATATATATTCTAAACGTTTTTCGTTAAATATTCTAAACATTTTAT10.6451612903225806No Hit
GAGATGGAGACTTAATCATTTTGGGTGATGATGGTTCTTGGACGCCACAG10.6451612903225806No Hit
TAACTAATTTGCTACCTATCGATTATTGGTACGATAAAAGAATAATTACG10.6451612903225806No Hit
TAACTACTATGTGCTTTATGCTAGCAAACAAGAAAATCATGGTATTCTCT10.6451612903225806No Hit
CCCTTACCAGGGCCAATTAGTTCTGAGGATATGGCTGTTACTGGAGCTGG10.6451612903225806No Hit
AGATTGCTCTTTCCCTTAGAAATGGGGTTGCTAACTTTTACAGCTATATG10.6451612903225806No Hit
ATGTCATGTGTATGATTGAGTATAAGAACTTAAACCGCAAACGGATCTTA10.6451612903225806No Hit
CTTCTCGGCCACTCAGCAATTTTTGTCCGAGAACTGCTGAAAAAACTCCG10.6451612903225806No Hit
TTATTAAACGGAGCCGTACANTGCATGCGAAACAAAGAACAANAATATGG10.6451612903225806No Hit
TGGTAATAATCTCTGGCAAATCTTCAGTACACCAAAAACAGCCTTTTCAA10.6451612903225806No Hit
ATTTTACTACAATTATAAGTTAAATATTTTAGATGTTGACATATAAATTA10.6451612903225806No Hit
ACTTTGGCTACACCATGAAGGTTTGAGAAGCAAGAAGAAGGATGGTTAGT10.6451612903225806No Hit
ACTTTTGCTACACCATGAAAGCTTTGAGAAGCAAAAAGAAGGTTGGTTAG10.6451612903225806No Hit
GAACTTAAACCGCAACCGCATCTTATAAGCCTAAGTAGTGTTTCCTTGTT10.6451612903225806No Hit
ACAAGATGAACAGGCTTGATTTTTCCTTTCTGTCACAAAGAGCAAGCACG10.6451612903225806No Hit
GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACT10.6451612903225806No Hit
GGACCCCCTGGAAGTCCTTCCAGAGCCTGTTGAATAATTTTTATGGATTC10.6451612903225806No Hit
AGGCTTCCACAGTTTTGGTTTGTATATTCATAATGATACCATGAGTGCTT10.6451612903225806No Hit
GAGTTGTAACATAGCTTCCATTTCTCCACTGAATTTCAAACTAAAATTGC10.6451612903225806No Hit
CTGCCGGGGGGGAGTCGGATTCCTCGAGAACTCCCAGTTCAAAGGAATCT10.6451612903225806No Hit
TAATAAGCCTTACTTAAAAAGGGCCGACTTCTTCTGTTTGTGAATAATGT10.6451612903225806No Hit
CCATAAAAGCTTTGAGAAGCAAGAAGAAGGTTGGTTAGTGTTTTGGAGTC10.6451612903225806No Hit
GATGCAACACGAGGACTTCCCGGGAGGTCACCCATCCTAGTACTACTCTC10.6451612903225806No Hit
AATGGGAACTTGATGAGTTGACCCGCCTACACGTCTTGCTTTTACTGCTA10.6451612903225806No Hit
TTGATAGAAAAAAAAGAAGGAAAAGGTTTGAGCTTTGCGAGGTCTTGTCT10.6451612903225806No Hit
GAATTGAGAAATACCGCTGGAACTTACGGAGTTTTGTAAAGACTAGAAAA10.6451612903225806No Hit
CAATATAACTGCACGCTCTTCATAGAGAGCATCACGTGGAAGACGCTTCA10.6451612903225806No Hit
TTACTTACCCTCGCCCAAAGTTTTATGTTATATTCACCTAGCCGTATCTT10.6451612903225806No Hit
TGAACATATAGGAAGAATCATTTCCGTAATAACACCTTTTTTGTTGCTTT10.6451612903225806No Hit
GAAACAAGGATCTGTTTTATTTGACCGAGAGGACCAAGAAACCAAAAAAC10.6451612903225806No Hit
ATAATACACATGACATCAAGTCATATTCGACTCCAAAACACTAACCAACC10.6451612903225806No Hit
CTGTCGCGCGCCGCCGCCGGCTGCCTCGCCGCCGAGGAACGCGCGCTGAT10.6451612903225806No Hit
CACTACTTAGGCTTTTAAGATCGGGTTGCGGTTTAAGTTGTTATACTCAA10.6451612903225806No Hit
GTGTTTTGGAGTCGAATATGACATGATGTCATGTGTATCATTGAGTATAA10.6451612903225806No Hit
CCTTTCTCACAAACTATTTTAGGAACCATAGTATAGATTCTTAAGGTATT10.6451612903225806No Hit
GCCTATCTTGAACAAAAGCCGATTGGTTTCCTACAACAAAATTTGGTAGC10.6451612903225806No Hit
GTTATTGCAGATTCTCACACTTGGCATGACAGGCTAGGCCATCCTTCTTC10.6451612903225806No Hit
CCTTAGTTCTGATGGCCACATGAAGATGCTGATGATCGTCGTCTCTTGAT10.6451612903225806No Hit
CATTTACACACTCTTTCATTTGCTTAGATCGTATAAAGAATTTATAATTC10.6451612903225806No Hit
ATATAACAGAACTAAAAACGCAGATCCAGAATGTTCGTGAAAAAAGAAGT10.6451612903225806No Hit
GGATTGTAATATGTAAACAATGCAATTGGACAAGATAACTGANGAATAAC10.6451612903225806No Hit
AACTGAGAGAGAGGTCAAAAACATTAACCGGAAGATAAGGAAATGTAGAC10.6451612903225806No Hit
GTCATATTCGACTCCAAAACACTAACCAACCTTCTTCTTGCTTCTCAAAG10.6451612903225806No Hit
CACGACGCCTTACTTCAAGCGCCAGGCGAACAGCCCATTCAAGGTCTTCA10.6451612903225806No Hit
GAAAATACTCAACTTTGGACTCCTCCTTTCAGCTTTGGGTTGCATCCATG10.6451612903225806No Hit
GCTTATTGATATGCTTAAACTCAGCGGGTAATCCCGCCTGACCTGGGGTC10.6451612903225806No Hit
CGATGGATAAATCTAATCTTTCCGCTTTCTCCGCAAATTTCTCTGCAAAT10.6451612903225806No Hit
GATCACGAAGGACAGAAACCGATCTATTACTTTAGCAAAACTTGTTATCT10.6451612903225806No Hit
GAATAATGAGAAAACTACGAAGAGTAGAACATTTTGTTAGTGGATCAATG10.6451612903225806No Hit
GACTTTGGCTACACCATGAAAGCTTTGAGAAGCAAGAAGAAGGTTGGTTA10.6451612903225806No Hit
GATTTTATAAAACCCCGTGTCTCCCATGGTATAATTAGTCCTGTCCGGAC10.6451612903225806No Hit
TTTCACAACAGAGGGGTTGAAACATTACCGTGACGGTGGTCATACTCCGG10.6451612903225806No Hit
ATCTTCATTTGATAAGTTTGTAACAGAGTATCATCATTCACATGATGTAA10.6451612903225806No Hit
CCTTTTCTACATGTAGAAGAAGAAACGTTCTATTTAGAGAACAATCAACA10.6451612903225806No Hit
ACGCTTGGTAGGTTCGATGCTCGAGCAAGGCATGGAAGAGACAGAGAGAG10.6451612903225806No Hit
TCATCGGAGTCCTGCTAAGTATCTCAGCTACCATAATTTCGTCAAGATCA10.6451612903225806No Hit
CGTTCCAAGCTCGAAGTACCATTTGTACAAATAAGAATCCCCTTCGTTAC10.6451612903225806No Hit
GCGTGACATGGGTTGATTGGTCCATAGGCGGTCCCCATCCAGCTACATAT10.6451612903225806No Hit
CATATATCACCCTTAAAAGTCTAGTAGGTTAATGGTATGGCATAACCAAA10.6451612903225806No Hit
GGGCATCGTCACGGGAACTTCTAAACCTTGATTGAAGCTATCTTCCCGGC10.6451612903225806No Hit
GGATTGTAATATGTAAACAATGCAATTGGACAAGATAACTGAGGAATAAC10.6451612903225806No Hit
GTGAAAAAGAGAGAGACAAGATGGGGAATTACAAGTTCAGAATTTCAGAG10.6451612903225806No Hit
CCTCCATAGAAAACCCTTGCTCCCTCCCTATTGCTCCAGATTTCAACCAA10.6451612903225806No Hit
ATATAATACAACAATACTTAGCGGCGACGGGATGTCTAAAGCGAGCGAAG10.6451612903225806No Hit
GATCTTAGAGGCGTAAGAATTGTTTCCTTGTTACAAGACACAAAGCCAAA10.6451612903225806No Hit
GTTGTGTAATTTTTCAGCCGTTGGATTGCTACACAACGGATATATAATCT10.6451612903225806No Hit
CGATCTTAAAAGCCTAAGTAGTGTTTCCTTGTCAGAAGACATAAAGCCAA10.6451612903225806No Hit
GATGATTGACAGCTGTAATATGCTTAGACGGCTAATAAGCAGAGTAATAA10.6451612903225806No Hit
GACAGAGATAGGCAACATGATTTGAACAGGGATCGAGATCGACGTGAAAA10.6451612903225806No Hit
GGTCGTCCCCTCTTGCTCTAGCAGTCAACGACAGAAAAAAGCAGGGACGT10.6451612903225806No Hit
TAACAATACTTTCTGAAGATATGACAAGCAGCTTCGAGCTCGGATTCTTT10.6451612903225806No Hit
GAAGTCCGATAGTGACTGACTGACTGACTGTGACGCTTTTTGTTTTTAGC10.6451612903225806No Hit
GGATACATTAGCATGGGATAACATCATAGGATTTCGATCCTATTGTGTTG10.6451612903225806No Hit
GTTAAGTAGTCATGCATTACGATAGGAACTCCCAATTCTCTGGCAAATAC10.6451612903225806No Hit
GACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCG10.6451612903225806No Hit
CTATCAATTAGTATTNCACAGAAGAAATCAATTATAGACACTAATACAAT10.6451612903225806No Hit
CTCTTAATCTTATTCAACCTCCATTTCTGCACAATCTTATCCCCTCTAGT10.6451612903225806No Hit
ACTTAGGATATAACTAACATGGAGTTGGATGAATCCTTTTCTTTATATTG10.6451612903225806No Hit
ATGCTTGAGGATTTCTATCACGCGAGTGAATTAATCTGTTGTTGAACCTG10.6451612903225806No Hit
TCTTACGCCTTTAAGATCCGGTTGCGGTTTAAGTTCTTATACTCAATCAT10.6451612903225806No Hit
GGATCTTGTGCAGACACAGCAACAACTAGCTCAAAACCCTAACATGATTA10.6451612903225806No Hit
GAATAGCTGCCATGGCCTGCAGTGTAAATACACACACATTAAGATAGTGA10.6451612903225806No Hit
ATACTCCTAGAGGGGGATAGGGCTAAGCGGAGCGAAAAGGGTTTTCCATG10.6451612903225806No Hit
AGACTAAGGAACGCTAGCTATATGCTTAACACATGCAAGTCGATCAGTTC10.6451612903225806No Hit
ATGCAGGATAGCGCGGAGCGGCATGGATCCCATTACCACTATGGAGTGTG10.6451612903225806No Hit
AATTACACGTGTCACTTTCTTATTCGACCTACTCAAAATACATTGCGTCT10.6451612903225806No Hit
GCTTTGTATGTTCTAACAAGGAAACACTACTTAGGCTTATAAGATCAGGA10.6451612903225806No Hit
TCCTAAATCCAATAAAACAAAAATATCAGAGGATGGGTAATCGACAGTTT10.6451612903225806No Hit
TAATGAAACTTGGAAGGAAAAACAACATGAAAAATAAATTCGACTTCATC10.6451612903225806No Hit
TAAGTAATGCAACTATGAATCTCATGGAGAGTTCGATCCTGGCTCAGGAT10.6451612903225806No Hit
GTACACACGCAATAGCTGCGTGGCATGAGAGGGGTTTGGAGTTCAGAACT10.6451612903225806No Hit
GTGTTGCGGTTTAAGTTGTTATACTCAATCATACACATGACAACAAGTCA10.6451612903225806No Hit
TTTTTAAAGACACTGGTCTCATTGAAGTCGAGGAGAAATATGGAGGTAGG10.6451612903225806No Hit
CTTCTCTCTTCGAACCCTGTTCCGGCGATGTTGTTCTTCCCACAAGTCTT10.6451612903225806No Hit
CTATCCTACACAATGTTATGTGCTCTCCCATAACTAGTTAGTGGTCTAAT10.6451612903225806No Hit
ATCTTGGCCCATTGGTTCTTTACAAGCCTAACTGCCTAAGGTCAATGAAA10.6451612903225806No Hit
CTTCCATGTCCTGCTACGATAAATTATAACAATACTCTGTTAACACGAAT10.6451612903225806No Hit
ACTGCACTCTGATAGGGAATTGATCTCATGACTTCAGACTGTTTTGCAAC10.6451612903225806No Hit
CACTAGCACTTCCGCGTAATAATTCTACAAGAGGTGATCCTATTACCGGA10.6451612903225806No Hit
GTCATAAGGACTTTGGATACACCATGAAAGCTTTGAGAAGCAAGAAGAAG10.6451612903225806No Hit
CAAATCAATTGATAATCTATTTTTTACAAAAAAATAGATTATTTTATCGA10.6451612903225806No Hit
CTGTAAGGCGTAAGAATTGTATCCTTGTTAGAAGACACAAAGCCAAAGAC10.6451612903225806No Hit
GTGTATGATTGGGTATAAAAACTTAAACCGCAAGCCGATCTTATAAGCCT10.6451612903225806No Hit
TCAGTTGATGTTATTGTCCGAAGCTAATCTTTGTTTGGCCGTCTGACGTG10.6451612903225806No Hit
GTACTTGTGGGGACTGATTGACTGTAAGGAGGAGGGTAAACAAAGGACAT10.6451612903225806No Hit
TCTTAATGAAGATCTAAAATTGCAGGGAAGTATAGGAAAATGGGTACAAT10.6451612903225806No Hit
TAGTTAATGTCATGATTCTCTTGAATAGAGTGATCATAAGTTCATAACGT10.6451612903225806No Hit
AAGCAATTCTTCTGCATTACTAAGACCTTCTTTGGCTTTCCTGAATTTCC10.6451612903225806No Hit
ATTTGATTCCATCCATAAATCGATTTTCTTCCCTATGAGTTCTAGTCTCA10.6451612903225806No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)