FastQCFastQC Report
Tue 23 Aug 2022
HNCMMDSX3_n01_chi_024.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCMMDSX3_n01_chi_024.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences83
Sequences flagged as poor quality0
Sequence length151
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTACAAGAATTGTGGCTTTTGAATTTGGAACAATTTAGGCTTATACTACA11.2048192771084338No Hit
ACTCAATCATACACATAACATCAAGTCATATTCGACTCCAAAACACTAAC11.2048192771084338No Hit
CATAAAAAACTTTATAATAAACAATTAAAATAAAAAACAAAAAATAAACA11.2048192771084338No Hit
CTATTTTACAATCTCTGTTTTTTTTCTTTTATCGGGAAAACATTCCTCAC11.2048192771084338No Hit
CTTTTGTTTTCCGTCTTTGATCTTATCCAATTTTGCACTCCATTTTGTGT11.2048192771084338No Hit
GCGCTACGCACTAACTTCTGCGTCCTTCTTCAGACAGAATATCCTTGCTC11.2048192771084338No Hit
CTATCTCGACCGTACAAGTCTCACCTATTAGGCCATTCTCTCAAAATCAA11.2048192771084338No Hit
CTAAAAGTGGACAAGATGGGTTAGTCTGATGCATACCGGTTAATTTGTTA11.2048192771084338No Hit
GTATGCACCAAAAGGTGCCTGTACGGCTCCTAAGGAATAAAAAATTATCC11.2048192771084338No Hit
CTATGACAAACAAATGATGAGTGTACCAGAAGGCATTGAAGCTAGCTAGT11.2048192771084338No Hit
GTTGTCACCTACACCATCACCAATTAATATACTTACAGGCGACAAAGGAG11.2048192771084338No Hit
GTGCTGGGTCCCCTTGCTGTGCGACCATGTGGTGTGCCTCGCCTGTGTCG11.2048192771084338No Hit
ATATATATGCTTAGAAGAATGAATTATATGCTATAGTTTCATGTCTAATT11.2048192771084338No Hit
TCTCATAACTTTGAAAAAGGTTAAGAAGGATGAACTTTTTCTTTTATCAG11.2048192771084338No Hit
ATATTGCCTGTTGCGGATTTGGTTTAGATTATACAAAGCGCCGATAATGA11.2048192771084338No Hit
TTTTGGGGGTGATAGTGGAAAAGTTGACAGATAAGTCACCCTTACTGCCA11.2048192771084338No Hit
AGTTTAGTATGTGAGAACTGTTTTGAGGCAAGTATGTGGTGGATTATTAT11.2048192771084338No Hit
ATCTCTCCATTAACAAACAGCTCAGCTGCAAGTCAACGACAACGATTAAG11.2048192771084338No Hit
GAACGGTTCATCAATACTTAAAAAAGAAAATATACGATTGCATAGCATAT11.2048192771084338No Hit
AAACAAAGTCATTGTACGTGAGATGCCCAATGCACCATTGAACACATATT11.2048192771084338No Hit
ATCTCAAGCTGTTGCTGGTCCTGGTCATAGTGTAGCAGTCACATCGAAAG11.2048192771084338No Hit
GTATATATTACTATATTAGTGTTAATTGATTATGATTTAAAATATCTTAT11.2048192771084338No Hit
GATTCTTCAACTGCTTATGTTTCAAAAGCTGGCGATTGGTTGCAAGATTA11.2048192771084338No Hit
GCTATTGACTGCTGCTAAGCAATTTTTTTTTTGGTTTTAGCCGGGTTTTG11.2048192771084338No Hit
ATCCTGTTTTTTGCTCTTACTAGAAGTTAAAAACGGTACAATATTTAACA11.2048192771084338No Hit
TCTTTAGGCAATCTCAAAAGCTTAAAGCTTTTAAACCTCTCATACAACGA11.2048192771084338No Hit
ATATTCAACAAAAATATTCATTGAGTATAATAATAAAACAATTCAACTTG11.2048192771084338No Hit
GGTCACTGCAACTTCTCTTGTCCAAAAAGTAAACTAAAAATCTTTTTTTC11.2048192771084338No Hit
TTTGTATCTTCTAACAAGGAAACACTACTTAGGCTTTTAGGATAAGATTG11.2048192771084338No Hit
CTAATCATACACATGACATCAAGTCATATTCGACTCCCAAACACTAACCA11.2048192771084338No Hit
GATGTCATGTGTATGATTGAGTATAAGAACTTAAACCGCAGCCGGATCTT11.2048192771084338No Hit
ATTTAATCTTGATCATTACCGTCATTGTCACCTTAGACTCCATTGATTCT11.2048192771084338No Hit
CTAGTCTTTCAACTGGCTCAACTTTTATTCTCTTATGAAATAGATGGATG11.2048192771084338No Hit
GGCCAAACTTGGCATGTGATACCTTTTCGTAAAGCCCAAAGAGAGCCCTC11.2048192771084338No Hit
TGGTTACACCTACAACCAAAATGGAAACCAAGAGTTTCGTGGTTCAAAAA11.2048192771084338No Hit
TTATTAAACATATTTTAATTCCTACTTCTTAAAGAATCATAGTGTATGTT11.2048192771084338No Hit
TCATTTTATAATTATAAAAAAAAAAATTAAAGCACTAATTATGTTTATGT11.2048192771084338No Hit
ATTCCGAGTAATACCACAACATAATTTTGTTGTCGGCTACAGATGGAGAT11.2048192771084338No Hit
GAATATATTAGTTTAAATATCAAATACAAATAATAAAATCAATAATAAAA11.2048192771084338No Hit
CTATCGATATTCTTTGCTTCTGCCCACCTGANAGCTGCAATCCTCTCTCC11.2048192771084338No Hit
CTTTACAGAGGAGTCCTACTACGCATCAGAATGCTTCTGGATACCGCAAG11.2048192771084338No Hit
CCCGTATAGTGAGTGTTCTCACCCTGCTCAGATTTACAAGAGAGTTCTAT11.2048192771084338No Hit
ATATATAGGAGTACTTTGTTTTGTCGAATCTTAGGCCGTCCCACCTTTTC11.2048192771084338No Hit
GAGGAGGTAGGATGGTCAGTTGGTCAGATCTAGTATGGATCGTACATGGA11.2048192771084338No Hit
CTCACATGCAACTGTCATTCCTTTGTAGCCAACAACCTGAACCGTCTATC11.2048192771084338No Hit
TATATATATATTTAGTGACAATATGATTAGATCACACCTTCAATTTGTTC11.2048192771084338No Hit
GAATCATATACTGCGGGGCGCAGGGCGGACGATTTCAAAGCGGACTCCCC11.2048192771084338No Hit
AGGCAATGGAATGCAAAATTAGAAAACTGCTTCAGTCTAAGTTACTAACA11.2048192771084338No Hit
TACCTTCTAAGGGCTGGCTTGTCCAAGATGCTGAACAACAAAGTTGGATT11.2048192771084338No Hit
AAATACTCCTGGGTGACCGATAGCGAAGTAGTACCGTGAGGGAAGGGTGA11.2048192771084338No Hit
TATATATATATCTAGGATAAGATACGAACTTTCGTCGTCACCTTCGATGG11.2048192771084338No Hit
TAGTTAGAAGCTCCAGCTCCGTATCAAGTTCACGATCAATATCGTTACTA11.2048192771084338No Hit
ATAAACAAAGAAAACACTAAAAACAATAAAGAGTTATAAATAAACCATAA11.2048192771084338No Hit
GAAAACCTCCTTAAACGACTGAACTCCTCATCATACTCGCGAACGGTCTT11.2048192771084338No Hit
GATTTATTGGTTTTTAAAGAGTTAAAAAAAAACTCTTTAATGTTTTTGAC11.2048192771084338No Hit
CAATTACGCACTTACTTAAAGACGAATGAACAAAGGTTTCAAGAAGTCAT11.2048192771084338No Hit
ATTATAGAACATACATAAGAGACTGACTGACTGAGTAATTTAAGATTCTT11.2048192771084338No Hit
ATTGTGGAATGTGGAATCGTACCAACATGAAGTTATATACCACCAAAAAA11.2048192771084338No Hit
GTCTCATGATATACGGGATTTTGATAAAATTCAGAGTACCCATTAATAAT11.2048192771084338No Hit
TAATATAACACCATATTCAAAAATATTAAGAAACTAACACATTGGAGTAA11.2048192771084338No Hit
AATTGATACCGACTCCTCAGAATTTGGTAACATCAACTCCGTTAACAACT11.2048192771084338No Hit
CTACTGAGTCTAATGCGTTCCTTTCATTTAAGACGAGAAATTGAAATCTT11.2048192771084338No Hit
CAAAAAATCTGAAAAAAATATTAAAAAAACTAAAAACGAAAAAAAAACAA11.2048192771084338No Hit
GGGATAACCACGGAACTTATCTGATGATCAATTACACATGGCTATGCTGT11.2048192771084338No Hit
GCATTACTAACGGATGCGATGATACCAGCACTAATACACCAAATACTATC11.2048192771084338No Hit
CCATTATTTTGTATTATTTATTATCTTTATTAGTCTTAACAAATTACCAA11.2048192771084338No Hit
CTATTATAGATTAAAGTAAACAAATATGACTTGAAATAAAAAAAATAAAA11.2048192771084338No Hit
GTAATGTAGAGTTGAGTCCATTTATTTAAAGATGTATAATTCCTTAAACT11.2048192771084338No Hit
GTAAAAATATTCATCAACAAGATACTGGTCAAATTGCAAAAAGAAGTTAA11.2048192771084338No Hit
CAATATAACATGACTCAACACCCACAAAAACAAAACAATTAACATCATAA11.2048192771084338No Hit
GAATATATTTATTGGTGGACGAAAAAAAGGTTTCTTGATATTTTTGAATC11.2048192771084338No Hit
TTATAAAAAAATAAATATTAAACGAACATCAAAAAAATAAAATTATAAAA11.2048192771084338No Hit
GAGTTATACTTCTGATAGGGATTCCAAGATCATATCTCTCATTATTCGAA11.2048192771084338No Hit
AGTTGAAAGAACTTAAGAAGCGTTAAAGACAATGTAGGTAAAATAAGAGA11.2048192771084338No Hit
TATTAGAGCATTTGAGGATGGTCAACCTTGCGTCGATATTTCAACTTCAA11.2048192771084338No Hit
CATTTGTTCTATGCAAAATTTAAAAAAAAAAATGGATTTACGAATTAATC11.2048192771084338No Hit
GATAGATACAGGCGAACATACAACTCAAGCAATAAACGATATCTTGGAGT11.2048192771084338No Hit
GTCGTAATCTGTTCGACCAGACCACGTCTTGCAACTCTTCTGGCGCTGTN11.2048192771084338No Hit
GAGACAGTTGTCCGTTACCCCCCGATCTCTCATCAAGTCGAACAATTGTA11.2048192771084338No Hit
AAGCATGGCTGAGTGATCCTACTCACATTGGACCTAGTGCTCAGGTGGTT11.2048192771084338No Hit
ACATTTAAGAGAGAATAATTATGTTCAAATGAGAATTAAGTGTACGTCTG11.2048192771084338No Hit
TATTCATGCTTCAAAAATCTTAAAAAATAAATCAAAAGTACATATAAATA11.2048192771084338No Hit
GTTTTATAATAACCCAAAAAAAAAACAAATTGTTGCTTTGACCTCCAAAT11.2048192771084338No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)