FastQCFastQC Report
Tue 23 Aug 2022
HNCMMDSX3_n01_chi_021.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCMMDSX3_n01_chi_021.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73
Sequences flagged as poor quality0
Sequence length151
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTATATACATTATTATTCTTTTCTATATAACAATAACAGTAAAATTTTG11.36986301369863No Hit
AAATAAAGACAGAAAAAATGCAAAAACATCACACATACATGGAGCATAAT11.36986301369863No Hit
GCTCAAAGGGTATATACTATACTCTCAGTGAAGAAAGTTTTTCAGTTTTT11.36986301369863No Hit
ATACAATGCATTACAGACGTATGATCATTACGATTCAACCGGGTTATTCT11.36986301369863No Hit
AGTTTATATGTTTTTATTGTAGTAAAAAAATATTTAAAATGGACAAGCAA11.36986301369863No Hit
ACTGAGCGTATCTTGCGATCAGCTTCAGCCATTCCTTTTGAAATATCGCC11.36986301369863No Hit
CTTTAGTGGGACAAACCGGGTGGTTTGGACCTGGAAGCAGAATTATCGTG11.36986301369863No Hit
TATATAATTCTGTTGAAAGCCGTATTCGATGAAAGTCGTATGTACGGTTT11.36986301369863No Hit
CATGCAGGTCGATCGGTCCAGACTTTATATGTGACTAACACACAAAAAAA11.36986301369863No Hit
GTCGTTACCTTAACCGCAAGGAGTGGGGTGCCGAAGGCAGGGCTAGTGAC11.36986301369863No Hit
GTTCTAAGAGTTTTGTGTGTGTTAAGGAGGGAATTTTAGTAAAATGTTCT11.36986301369863No Hit
ATTTTAATCAATTGACCCGTAGTCCAACCCGGGTGACTCCATGACCTGGT11.36986301369863No Hit
ATATTATACTATATTTCAAATGGCACATGATTCATTCTATGTTCATATAC11.36986301369863No Hit
GAGATAGACGTTGACGATGACTCCAAGATATCTGAGTCTTTTCCCGGCGG11.36986301369863No Hit
TTTGTGTCCAAGGTCCTGGATATATAACTGCTCGAGACATTATTTTACCG11.36986301369863No Hit
TGCATAGTGAGAAGAGTAAGTCAAGAGACAGACTTGTTCGAAAAGAAACA11.36986301369863No Hit
ATACATGTTCTGTCCAAAGTGTATATAACTTAGCATTTGAGATTTGGAAG11.36986301369863No Hit
GTCCCAATTCCACTACCATCATATTCCAGTGTCGTGGTGACTCTTACAAG11.36986301369863No Hit
CAAAGGGAGGATTTTACGAATTTGCATAGTCAAAAATGAGAAGCGATCAA11.36986301369863No Hit
GATACCTGTGACTCGATTGACGAAGGTGAAATAGTATCTCTCTCCAAAAA11.36986301369863No Hit
ATGATAATGACCACAAGATTTACAACTTACATAAATACATGACCAGAATA11.36986301369863No Hit
GATGACTCAAGCTTGCATCGAACGGCAAAAGAAGCAATCGTCTGAAGAAT11.36986301369863No Hit
TCTCAAAGCTTTCATGGTGTAGCCAAATTCCATATGAGTCTTTGACTTTG11.36986301369863No Hit
ATGCTTCATAAATCAGTACTTTAGATTTTACAATCTACAGTGAGAAAAGT11.36986301369863No Hit
GAAATGGAGACTTTAATTTAAAACCAAAAAATAAAAAGTGATTTTAATAT11.36986301369863No Hit
CTATGTGTCAAATGCCACTCTCTTTATTGCGGTCTTCTATGTTTTGCATC11.36986301369863No Hit
CACATGAAAACATTAATAATAAAAATAAAAACCAATTAATCAGAAAAAAA11.36986301369863No Hit
CTTCACGGCATCATTTAAACGGCATCTCACATTGTTCAACATCCTCGAAA11.36986301369863No Hit
TTCGTAAGCTCTTCATCAATAACTTGCAATACACGTTTTTGTATTTTTAG11.36986301369863No Hit
GCAAAGGTGCATCAATTTCCTTTTCAGATACCATATTCCTTTTAAGGTTT11.36986301369863No Hit
CATTCACACACACCTGTTTGTGTTATAACTGGTGTAAGTCAGTCATTCTC11.36986301369863No Hit
GCTAGGTGGTGTTGAAGGCATATTGTACATCAAAGTTGACTATGTCAAGA11.36986301369863No Hit
GTGTTTTGGAGTCGAATATGACTTGNTGTCATGTGTATGATTGAGTATAA11.36986301369863No Hit
ATTCTATATAGAAATTCTATCCTCTATAGAAATAGAAATCGTTTATATTG11.36986301369863No Hit
CTATCCATCTGCCCTTTGTCAACGCATTTTTTTAGGCAAAGACTCCGTTT11.36986301369863No Hit
TATCAAATCAATAAAACTTCAATGAAAGTAATAACTTATTACAACATTAT11.36986301369863No Hit
GTAATGGCCTAATGGCTAATGGCAAATGGGTATCGAGGGACCAATTAAAA11.36986301369863No Hit
AGAAAAAGCTACTCGAAAAATACGCATACCATATGATACGGTAACATTAT11.36986301369863No Hit
GAAGTAGTCAATTCTAAAGCTCTCCTCTGGTGATAATACAACACTTCCTA11.36986301369863No Hit
ATAGTCATTGGGTCCTCCTAAAAAGATCTACTAAATTCATCGAGTTGTTC11.36986301369863No Hit
CACTAAATCGCTTTATTTGATTGTTCAATAATTGAATCGTCCCATTCACA11.36986301369863No Hit
GTCTTGACGTGCGCGTTGCTTCCGGATATCACACAACCCCGGCACGAAAA11.36986301369863No Hit
GTCATATTCGACTCCAAAACACTAACCAACCTTCTTCTTGCTTCTCAAAT11.36986301369863No Hit
GATTGAGAAAAATCAGTCATTAACAAAAACTGATGAAGGATTCCTCGAAA11.36986301369863No Hit
GCTTATGTTTTCAGTCCAGTCCCAGTTCCTTGAGCACACTTGTTCGCGCT11.36986301369863No Hit
GTACATATGATGACAAGCAAAACATTGAGGAAGGACAACAAAGTTAGCAC11.36986301369863No Hit
GTGTATGATTGAGTATAAGAACTTAAACTGCAACCCGATCGTGTAAGCAT11.36986301369863No Hit
CCCGCAGTAGCATTCAAATAATGCCCTTTGATTTCACCTGTTTCAGCCTG11.36986301369863No Hit
ACCTTACTTTTCGGGATCTGGTTGAGGATCTAGTTTTATGTTCAATAATA11.36986301369863No Hit
CTTTCTCAACAATCTCTATTAGATCTTTCTCCATTACCATTACATCTGGA11.36986301369863No Hit
ATACTTAATGTATCAGGCTGTTAAAAAACCATGGGAAGAAGATGCATTCA11.36986301369863No Hit
AGTTTTACTGAGAAACTAGCAAAGTATTTTTTTTTACTTAGAAACTAGAT11.36986301369863No Hit
GTAATATGTAAAGAATATTTTCCCCGTATGGATCTCTAGCTAGACCGGTT11.36986301369863No Hit
GCATATACTAACGGATGCGATCATACCAGCACTAATGCACCGGATCCCAT11.36986301369863No Hit
ATATCTATCTATATGAAGAAGAAATCATGTAACGAAGGGGATTCTTATTT11.36986301369863No Hit
GTTATGGTTTGACTAAGTTTCTGTTACGATATGGATAAGTTAGATTTATG11.36986301369863No Hit
CTTTTGAAAAATGGATCATCGTCGGGCCGATGGCTGAAATTCCAGTCACT11.36986301369863No Hit
GATCAGGCCCAGTTAAAGCCCACCAACTGAAGAGGCAACAACCGTCGTTT11.36986301369863No Hit
TGACTGGACTCTGGGACGGAAGGATTCGAACCTCCGAATAGCGGGACCAA11.36986301369863No Hit
ATTTTATGGACAGATCGAGAAGTGAAAACGCCAAAATAACAAAATCAAAA11.36986301369863No Hit
ATTTCTTTCATTCTCATAAGAGAATAAAAGGAGTTGTGATTGAGTAAGTT11.36986301369863No Hit
AGTCTGAAAACTGGAAAGCCATTTCATGCTTATGCGCTTATATGTTACAC11.36986301369863No Hit
GTAAATCCTTTGTATTTGAAAAATCTCGATATAATTGTTGAGATTAAGGA11.36986301369863No Hit
TAAACCTTCAGAGCAATTGCAGCATTCTGTTGTTCAAGCAACAGAGCCTC11.36986301369863No Hit
CTTTGTAATACATGTATGTTAATCTATATAACTGATAGTGAAAACGTCAT11.36986301369863No Hit
CATACGGAGCAAAAAAATCTCGGAAAGAAAAGAGAGAATGCTAATAGGAG11.36986301369863No Hit
GTACCAAATTTATTCTTACAAACTCGACTCGAATTTCATAAATGCAAACC11.36986301369863No Hit
GGCTTTCTTTCAGCTTCTAAAATCCAAACTAATTAAGCAATTCAAAATCA11.36986301369863No Hit
GTCCATAAGCAGTGACAATTGCCCTATGAAGACTCGCTTTCGCTGCGGCT11.36986301369863No Hit
TGCATGCAGTTCCCTTGAAAGCTCGTCCTAGTGACCACAAAAGAGCATTT11.36986301369863No Hit
TGATTCAAATCAGTATTAATCCAATGAGGAATCATATAAGCAATATTACC11.36986301369863No Hit
AAAGTTCATGGCCCCGCTTACCCATCATGTTTTTATTTAGAAAACAGCCC11.36986301369863No Hit
TCTCTGCTTTTAGTGTTTTGGCTAATTGCACCAGGACAGAAAACCCAAAC11.36986301369863No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)