FastQCFastQC Report
Tue 23 Aug 2022
HNCMMDSX3_n01_chi_017.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCMMDSX3_n01_chi_017.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGAGAGACATTTACAGACTCGGAGCTTGCAAAGATATCTCTCTTCAGGCT22.0618556701030926No Hit
TTCGTGATTTGTGCAATATTACGGACCCAAAATTACTTTTTCAAGCATTG11.0309278350515463No Hit
CAAAATCATGTCATGACCAATGTCTCCACATCTTAAACATACAACTCTTT11.0309278350515463No Hit
TGGATACACCATGAAAGCTTTGAGAAGCAAGAAGACGGGGGGGGCGGGTT11.0309278350515463No Hit
CTACTTAGGCTTACAAGATCCGGTTACGGTTTAAGTTCTTATACTCAATC11.0309278350515463No Hit
GAGTATAAGAACCTAAACCGCAACAGGATCTTAAAAGCCTAAGTATTGTT11.0309278350515463No Hit
GTCGGGGGTTCGAATCCCTCCTCGCCCACAACCGGCCCAAAAGGGAAGGA11.0309278350515463No Hit
TATCAATATTGTTGCTTCAAAAAATTGGGAAATTCATCATCTCGACGTCA11.0309278350515463No Hit
CAGCAATGGGGATTCTCTCTTCTATTAGAAATGATATTATATTGGTGACT11.0309278350515463No Hit
AATCAGAATGNGATTCGGAGCATAAGGGGATAACATTAGAGAGATGGTTG11.0309278350515463No Hit
GAATATGAAGGCTCTTCTTGGGTCAGGCTACAGCTAGAAGACTCAAGCTT11.0309278350515463No Hit
ATGGTATCTCTAATACTCTAATACAATCAATTCTGTTTTTCTTTGTCCAA11.0309278350515463No Hit
GACAGATATATCATAGTCATACTAATTATATATGTATATTTTTCTATTAT11.0309278350515463No Hit
AAATTAGCATGTTATATATTTTGCAAAATGATATTTATTTTACAATAATC11.0309278350515463No Hit
GTGGCTAGACTTGAGGTCAAAGAGATTGAGCTTCAGGTGACTGAGAGGTT11.0309278350515463No Hit
CTAACAGACCGGTAGACTTGAACCTTGTTCCGACATGACCTGATCAATTC11.0309278350515463No Hit
GGCCTTACAGGTACTCTTATTGGCAGAAAAATGAGATAGAGAAGATGGTT11.0309278350515463No Hit
CATCCATGACTCTCTTGGAAGCGTATAAGCCAGTGTATCCAGGATGCGAA11.0309278350515463No Hit
GCTTTTGTGGTTTACATTTGTGCCCGTGATGCCATCTCTCCCCACAAAAA11.0309278350515463No Hit
ATATGTCCTTGTGTATGCTGATGATATTCTCGTTACAGGAAATGATAACA11.0309278350515463No Hit
GATATATGGTCTGTTATTTTCCCAGTCTCCAGTGACATTGATACGAAAAT11.0309278350515463No Hit
CAAGTATGTTGACTCAAAACAGTCACGTTATATCTCTGTCTCTTTGATAA11.0309278350515463No Hit
CTATTACTCGACCTGTCACTCGGCCTCACCCAGTGCTCTGCAAAGAGCTG11.0309278350515463No Hit
TGGCAAGCCTCTTTTAAACACAAGTCGCCTAAGTATGTCATATCTGAATT11.0309278350515463No Hit
TAGAAATAGAGAATCCTTTTTTTATTTTGTCTCGTCAAAACACAAGTAAA11.0309278350515463No Hit
TTGGTAAACAATCCACAACCTAGAACTGGTAATCATCTATGCACATACAA11.0309278350515463No Hit
GTAGGTATGAGAGGATTAATGTCGGATCCCCAAGGACAAATGATTGATTT11.0309278350515463No Hit
TCTTTCTACCATACTAGCCATTATGGTTATGGTAATGTATAAAGATACAA11.0309278350515463No Hit
ATGTAACATTTACAATAATCTCTATTTGAAAACGAAAAATCAAAGAATCT11.0309278350515463No Hit
GGTCTTGTGTCCCTTAACCTTCACCGGAGGCGAAAGTTCCGGTGAAGGCT11.0309278350515463No Hit
GTTCCATACTTGATAGTCAGTTTTTGTTGACTGAATCATATACCAGCCAC11.0309278350515463No Hit
TTGAGCCAGTGCTGCTAATTGGAGTTTGTGGTAATCTAGTAATTTCCAAA11.0309278350515463No Hit
CGTTCCATACAAATACCAAATAAAAAAAGACAATAAAGATAGGTAATCTA11.0309278350515463No Hit
CTTTTCCTGTTTGTGATAAGATGTCAAAGAGTAAGATTTTTCATTTATTA11.0309278350515463No Hit
ATATAAACCCCATATGATTAAAAAAACTAAACTCTCTTTTTTTTCACTTT11.0309278350515463No Hit
GGCCAGCTTGATGGTGTCATTTGGCTTGATGTGCGGGTCAGGGTAACGGA11.0309278350515463No Hit
CTCTTGTTCATATCTCTCATCAAAAGGGGCTATTCGATAAGGTCTATCTA11.0309278350515463No Hit
CTGATGACGTAAAGCGAAAGACTCAGAACAGTGGAGTGACTTATGAAGCT11.0309278350515463No Hit
ATAATAGATAGGAAATGCGTCGGTTTGAAAATAAATGAATTGCTTGTCGT11.0309278350515463No Hit
GTCATATATTAATGTATTTTTTAGGTAAATTACCCGTAGTTGTTATTAAA11.0309278350515463No Hit
CTCAAATATCTCTGAGGCTTCTTTCAACTGTCCTAACTTGCAAAAACCTC11.0309278350515463No Hit
CTTTAACACTGAACGAGATGAAGGTTACCAAGTTTTGGCTTGGCCAAGAG11.0309278350515463No Hit
GTGCAATACTGTAAGAATAGTCAGCTTTTACGTCGGTGGTGCTTGATTCA11.0309278350515463No Hit
CTCTCCTACTGTCTCTCTCTTTCTATGATATCTATCTATGTTTGCACTTT11.0309278350515463No Hit
ATGTTATCCCATGCTAATGTATCCAGAGCGTAGGCTTGCTTTGAGCACTC11.0309278350515463No Hit
TTATTACTTAAAAAAATATATGTTTTCATATATATACTTCAAAATTTGAA11.0309278350515463No Hit
TGTACATGCTGCATTATGTTGTTTTTTTGCGAAAAATAGGTCCTGTAATG11.0309278350515463No Hit
CCACTCGGTGGCCTTAAGAAGAAGTGAAACCACTACGTCGAAGGTGGTGA11.0309278350515463No Hit
AAACAGTTCTTAGCAGAGTTGGAAAAGGCTTCTTCTGGTATAGAGNCACA11.0309278350515463No Hit
GCTTCATTGATCTGTCAACTAGAAAGTCCAATAAGTCGCCTGTATAAATA11.0309278350515463No Hit
GTTCTACTCGGCTTCGTTTTTAGGAGACATTGGTGAAGTGATTGATCATG11.0309278350515463No Hit
ACATCTTTCCATAACTAAGCCGATCAAAACTATAACTCGGCCGCGTCGAG11.0309278350515463No Hit
CTGTATAACCATAAATCAGCCGTAAGCATTCCATAACTCAGTCATAACAT11.0309278350515463No Hit
GTTACTATGAATCTTTTCCTCAACTAAAACGTAGATGATTTTCTCATCTT11.0309278350515463No Hit
AGATCAAGTCATATTCGACTCCAAAATACTAACCAACCTTCTTCATGCTT11.0309278350515463No Hit
CAATCCATTAGTTTTATTCCTAGTCCACTACTTTAGTCCAGTTTGTTACG11.0309278350515463No Hit
GGTGGATGCATTGCCATATCTATCAAAAGCTATCAGGGAAAGCAAAGTAA11.0309278350515463No Hit
AGAACCAGCTAAATATGGTACGTGCCACTTAAAACTCTTTCGTTGACCCT11.0309278350515463No Hit
ATATACAAGTTGTTACTATACTTTATGACTACAAAAGTTCAAAACCAAGA11.0309278350515463No Hit
GTCTCCGGGGAGGCGAATGCCAGCCGTTCGTTTGCATGTTCCTTGACACT11.0309278350515463No Hit
ATATATAGACAATGGTACGTAAAGCGAAGAGTACATTGCCACCCTGTAAA11.0309278350515463No Hit
ATTGATTTTTGTCCATAGGACAATTGATCTCCAGCTCATTTGAAAATTTC11.0309278350515463No Hit
GAGATAAACACTAGGTGGACTTTCTTCACCCTGCGTTTACGGCGGTCAAG11.0309278350515463No Hit
TGTAAGGCATNTGGACTTAGTTTGGATGATCATGGCAATAGGCTAGAGAC11.0309278350515463No Hit
GTAGGCATCAATGTTTCTCTTCTTCTTTCTTCTGGCTAAGAACACAACGG11.0309278350515463No Hit
GACTTGATGTCATGTGTATGATTGAGTATAAGAACTTAAACCGCAACCCG11.0309278350515463No Hit
GTGCAACACCATATTCATGATCTGAAGTGTTACAATTCATCCCTACTAAC11.0309278350515463No Hit
GAGCGGGGTAAAGCCAGAGGAAACTCTGGTGGAAGCCCGCAGCGATACTG11.0309278350515463No Hit
AGATGTAATTGCATCATTAAAAGTAAGCTGAAGCTGAAACAAGGAGCTTA11.0309278350515463No Hit
GGCTGAAAATCAAAGTTTATCAGAAGCTTGGGCTAAAATTCCTGAAAAAT11.0309278350515463No Hit
ATTCGTAGCTTTGGGAGCTAGCATTGAAGGCTTTAGAGTGATGAGGAAAG11.0309278350515463No Hit
ATCAATAGTGTGACGACTTTTTGGAGAAAAAATGTTTGCATAGAAATTAT11.0309278350515463No Hit
ATCGTGTATTGACCGTTGGGTCCGTAGAAAGTAGAAAAAGGGCAAAAACC11.0309278350515463No Hit
ACCTTAAAGAGACCATCTTTGTCTCATAACCTGTCCTTAGCCAAATGAGT11.0309278350515463No Hit
TATCAGGATTGATGCACTGATCTTGATTCTCGTTGGTAGCCGTTCCAGAA11.0309278350515463No Hit
GTAGTAGCACTGATCATTCTGAAGAAGACCAGAGTAAACCACTTGAGGTA11.0309278350515463No Hit
CAATAATAAAAAACGAAAATCAATATAACACTAAAAATAACAAAAATTAT11.0309278350515463No Hit
GTTTCCCGCTGCCTCGGAAGTACATATACACTTGCTGCTCCAACAATACA11.0309278350515463No Hit
ATATAACATGTAGCAATTGTTACGGTTTTGGTTTCGGTAGCTCACACTGG11.0309278350515463No Hit
CTCTTCACCAGGACGTATAGGAATCCAGTCATACTCCGAAGCTGAAGGCA11.0309278350515463No Hit
CATATATTCCTCATCTTCAGCTCCATCGATCACCACAGGGCTCCCATTCC11.0309278350515463No Hit
TTATTAGTCTAGTCACTAGTGTCTTTTCAGTATCCACCTGTGTAATAATA11.0309278350515463No Hit
TTAATTAACTTTAACGTTCATCATATCTCCATTTAATTGAAATAGAGTAA11.0309278350515463No Hit
CTTCGAACCATTAGCTCAGAGCCTCATCGGTTTTATCTACCCTTATCTTC11.0309278350515463No Hit
CTCCATCTCTCGATCTCTCTATCTCTCTCACTTGTCTCGATCTCTCTATC11.0309278350515463No Hit
GATCCAATGGTTCTCACTCAGTGAACTTTGGACTTTGAAGGTGTCATTAA11.0309278350515463No Hit
TGACAGAGAATCCACTGTCTGATTTGCCTCGAGCATGATCTTTGACTAAA11.0309278350515463No Hit
ATATATCACCTTTCTATGCAAAGCTTCACGGACACCTCCAGGATACAGAA11.0309278350515463No Hit
CAATCAATAAACGCCAAACTAAGTGAGACAAAAAAAAAACATCACCACTC11.0309278350515463No Hit
AAAATGTCCAATCAACAAATTAAACATAAATATACATAAATTCTTCCAAC11.0309278350515463No Hit
GTGTTTTTGCTGCAGGGATGTGATGCATCAGTCCTTCTAGACGCAGATGA11.0309278350515463No Hit
GGATACGTCGATGTCTTTATCATCAACTTTTCAGTCACTGTTCCTTGTGT11.0309278350515463No Hit
CTTCTCAGAAGATCAAGGTCGGTCGGCGGTGCACCCGCGAGGGATCCCGC11.0309278350515463No Hit
GTTGTGGATGGGACAAGAAGTAGTTCAGGTACACCGTCTTGTTCGCAAAA11.0309278350515463No Hit
CTATTAAAAGCGACTCACGTGTCTTTTTAGTCAAGTCGTCTTTTGAGTTG11.0309278350515463No Hit
ATTTAGAACCAATCAGAGATCAAGTGAAACATACAGGAAGATCAGGAAGG11.0309278350515463No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)