FastQCFastQC Report
Tue 23 Aug 2022
HNCMMDSX3_n01_chi_015.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCMMDSX3_n01_chi_015.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1585
Sequences flagged as poor quality0
Sequence length151
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCCTGTTCTTAAAATAAAAGTTGACATACAAGCACTCAATTTGATCTA30.1892744479495268No Hit
GATTAACATACATGTATTACAAAGTGAGCGGCAATTAGGTAAAAGTGAGT30.1892744479495268No Hit
GCGTAGGAAGGCCCACCGAGCGAAGCTCTTTCTTTTTTTTGGCCGTGCCG30.1892744479495268No Hit
ATAAGATCCGACATGGCATGTGCGTATTCAGAATGGTCAAGGAAGTTCCT30.1892744479495268No Hit
GGTTAGTGTTTTGGAGTCGAATATGACTTGATCTCATGTGTATGATTGAG30.1892744479495268No Hit
ATCATAAGATTCCCGTTCTTGAAAATCCGTACTTTTCCAAACCCAGAAAA30.1892744479495268No Hit
TATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTTCTTTACGGAAACA30.1892744479495268No Hit
AAGAAAAATGGTCTCTCAGGCTGGTTCAAAGCCCTATTTTAGATAATAGG30.1892744479495268No Hit
ACTAGATATTGGATGATCTCAAATCTTTGTATATTTAAACGTTACAGATT30.1892744479495268No Hit
ATATTGATCACTTAAAGAACTGCTTTAAGATATATCTTCCTTACCATCAT30.1892744479495268No Hit
CTCTTATATGATGCATCTGATTGGTCTATGATGGAAACACTAATCACACT30.1892744479495268No Hit
TGCTTATTTGTTGACTTCTGTTTCTACTTTTGAGTTAGTTGTCTCTGAAT30.1892744479495268No Hit
TTATTATATAGTCTTAACAGGTTAGCACCAACGAGTTTCGTTGACATTTT30.1892744479495268No Hit
ACCAGAACCTAACCATGCAGCTCAAGAGTTTGTGAGCCTCCTTTTCCCTT30.1892744479495268No Hit
CCTCCCGCTCCTTGTTCAAATTTCAATTTCACATCCGTTATACTCACAAC20.12618296529968456No Hit
TGATTATGTGATCCATTATCTTTCTTAGGAGCAGGGACTCGCTCTCTGAA20.12618296529968456No Hit
AACGTGTGCCCTACATAAACCCAAATTCAAATCGATTCAACAATCAATCT20.12618296529968456No Hit
TGCCCATACTTTATCAAAAAAATAAAAATGCTCATAACTTAACCAACACA20.12618296529968456No Hit
GCTTTGAGATTTCTCTGGGTGATACAATTGGAATCGGCACTCCTGGTAAT20.12618296529968456No Hit
GGGGTCATCTCATTTTTGGATCTGCAACGAATGAATTCAAGAGATAAGAG20.12618296529968456No Hit
CTTTTACCTGTCTAATCTTCTCAATTCCGGTTGCAGCAATGAAATCAGGA20.12618296529968456No Hit
GCGTGTACACATTCTAACAACATTCTTAATAAATTTTCTTAAAAGTAATG20.12618296529968456No Hit
GGTAAACATATTTATACGGATAACATATAACCACCGTCTTTATAGGGAGA20.12618296529968456No Hit
CGCCTATTCCTAATCCAAAGAGGAACAGCGTTAGAAGAGTCATTTATCAA20.12618296529968456No Hit
CATAAAACATTGTGCGAGTGTGTTTTAAGGCAGTCCTAACTATATATAGT20.12618296529968456No Hit
GTTATTAGATATTAGAATTTTCTGAAAGGTAACTATCCCGGTTTCATATA20.12618296529968456No Hit
AAATAAAGCAGATTCCATTTTCTAGCTTAATCTGATTGATCACACTAGGA20.12618296529968456No Hit
GTTTCTGTGTATGTGCCACTTGTTCTCAAGTGTTGGATTGTATGATGATT20.12618296529968456No Hit
ATTATAGTCTATTATTACGTTTTTTTATTCAAGTGACAAAATAAAAAGGG20.12618296529968456No Hit
GAATTAGTGATCCTTCGAGAACCAAAGACCATGAACAGTAAGGTGTGTTA20.12618296529968456No Hit
GATACAAGAACTTCTTATTGTAGAAACATCCATTGATCCCTGTAGTCATG20.12618296529968456No Hit
ATATAAGGCTCTATATAATTTTGTGGAAATCAACATAATTACTTGACAAG20.12618296529968456No Hit
GTCTATGATATGGTCTGAGATTGAGTTATTGTCTTATCTAGAATATTCTT20.12618296529968456No Hit
ATTTTACACTCTGCGAAAGGTAAACATCAATAGTTGATTAATCGTTTTCT20.12618296529968456No Hit
GGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCGGGCCGGACG20.12618296529968456No Hit
AGAAAAGGTGGGGGGGGGAAAGGTCATAAAAACGAGGGTTCAGGATCCAA20.12618296529968456No Hit
GGTACATGATCTCTCTACACAACTCAATTAAGGCCAAAGGAAAAGCAAAG20.12618296529968456No Hit
AGTGTATCATGCCTGAATCTAACTGGAGTTCGCGGTGGTGGAGGAACTGG20.12618296529968456No Hit
ATTTTATCATCAATCCAATCACCGCTCACGTTTTTTCTTTTTCTTATCAA20.12618296529968456No Hit
ACACTACTTAGGCTTACAAGATCGGGTTGCGGTTTAAGTTCTTATACTCA20.12618296529968456No Hit
GTATATATGATATATCACTTTCCATCATTTGTTCTAAAGACATGATTTGT20.12618296529968456No Hit
TCCAATAAGTCTATTGGAATTGGCTCTGTATCAATGGAATCTTCTCATCA20.12618296529968456No Hit
GTTCTTATTATAAGATCGTGTGATTGGACCCGCAGATGTTTGGTAAAAAG20.12618296529968456No Hit
GAGTATAACAACTTAAACCGCAACACGATCTTAAAAGCCTAAGTACTGTC20.12618296529968456No Hit
GATCTAGCTATGACAAGGATTGTTATCGAACCGTCACTATTACAGATTAA20.12618296529968456No Hit
AGTTCATTTTTCAAAAACACGATAAAAAATTGTTCTGATTATTAGCAGTT20.12618296529968456No Hit
ATCTTATATATATCGTAGAATTCTTCTATATATGGTAGAAGTACCACACG20.12618296529968456No Hit
GTGATATAGTTTGAACCCAAACTTTTAAGTTTCTCTTTGATGTTCAATCA20.12618296529968456No Hit
GGGTATAAGTGTTGTCTAAACCCTCCTAATTCATCCCTAACTCTTATAAT20.12618296529968456No Hit
GGTTGAACTTCTGGTTCGGTCTCACAATTGTGTTGTTCTTTTTCCATATA20.12618296529968456No Hit
ATCGTTACTTCTCTATTATATTGCTCAATACGTTCACGGATAATATTACT20.12618296529968456No Hit
GTTTACCGGGTCCGAAAATTTGTCGACCAGGAGTGGAACTGTCTCTTATA20.12618296529968456No Hit
ATTACATAGAATTCAATTAAGATATTGTATGAAAATATTATTTCTTTCAT20.12618296529968456No Hit
ACACTAACCAACCTTCTTCTTGCTTCTCAAAGCTCTCATGGTGTAGCCAA20.12618296529968456No Hit
GTATTTATATGTATTGTATTATACATAACACTTGGGAGATTTTTCTTTAC20.12618296529968456No Hit
ATATAGAGTTTTTCTCATATCAAAACTGGATTAGCTTCTTTCGCAAAAGA20.12618296529968456No Hit
GTCATATTCGACTCCAAAACACTAACCAACCTTCTTCTTGCTTCTCAAAG20.12618296529968456No Hit
TGCTTAGTGGGGATCCTCGTACATGGTGAATAACCAAATTCCAATTGAAA20.12618296529968456No Hit
TTACTATCGCGACGCGGGCATCAGTAGGGTAAAACTAACCTGTCTCACGA20.12618296529968456No Hit
GCTAAAAAGGACTCTACTCGATCCATTCACTCGATCCAGGCAGCTATAGA20.12618296529968456No Hit
AACAAGAAGTATGAATTCAATAGTAGTCGTGTCTCACCCATACCGAGTGG20.12618296529968456No Hit
CCTCATCGTAAGTACGCGGCGGGAGCTTCTCGAGCCATTCCTCTGCGATC20.12618296529968456No Hit
TATTTATATTGTGTATATTCAGAGTGTTAGTTGAGTTGATTTTATGAATT20.12618296529968456No Hit
CTCATAGTCATGAAGAGGATGACAAATTAAGAAAGAGGAACATCAATGTA20.12618296529968456No Hit
GTTTTAACTTTGGCTGCTCTGTCTCAATCCCTCGAGACATAAACCCACTT20.12618296529968456No Hit
GGAGTGTTTAGACAACACTTATACCCATTTTCTCCCAAAAGAGTTTAAAA20.12618296529968456No Hit
GTTTAGTTAAATATGACGACTATTATGCTCTTTTGTATCGTTTTTTTTTG20.12618296529968456No Hit
CTGCAATACCGTATTATGATTTTACTCCTTTTGACTACATCATCGAGAGG20.12618296529968456No Hit
TCTCACTAGGCTCAGGCCTGTGCTGACTTGGCTCAGGCTCTTCAATGGCA20.12618296529968456No Hit
TTATTGTACCAGCTGTTGTACCGGTTTCAATTTCGATTTAATGGAAACCA20.12618296529968456No Hit
ATACACATGACATCAAGTCATATTCGACTCCAAAACACTAACCAACCTTC20.12618296529968456No Hit
GAAATCCGAGTGAATGGAAAAGACAAAATTAATAAGGATGATGAATTCCA20.12618296529968456No Hit
CTGATACTCAATCATACACATGACATCAAGTCATATTCGACTCCAAAACA20.12618296529968456No Hit
TGAACGTATTGAGCAATATAATAGAGAAGTAACGATTGTAAATACCGGTA20.12618296529968456No Hit
CCTTATGAGTCTTCCCATCTAACAAACTTCCCAAGAACGGCGTGATCTCG20.12618296529968456No Hit
GACATATATTATTCAACCTATGAAAAAATAATATGTGTACAATGTCCTAC20.12618296529968456No Hit
CTCATCCGTGATAAAATAAGGAGAAATGTAACCGCTGGCTAGCTTCATTC20.12618296529968456No Hit
GGCTAGAGCTGTAAATTTGGGTAATCGTCCTAGAGAGAGAAAGAGATGGA20.12618296529968456No Hit
CCCATTCCCAGTTCTTTCTCTTCTCTCTTTTTTTAGTTTAGTGACAGCTC20.12618296529968456No Hit
ATATTACTATATATAATGTAATACAATAAAGAAGAAAGAAGGAGGATTTC20.12618296529968456No Hit
ATCTGATTCATGTGAGGCCTAAACTAAAGCTGCGAGTTTCGCTGATAATA20.12618296529968456No Hit
AAAGAGTATTGTGGAGTAGCATCATGGTCATCGATTATGCAGTGACATGG20.12618296529968456No Hit
GAATAAATAAAACTATAAATAGTTTATTTATAATCAAGTTGAACAATTTT20.12618296529968456No Hit
CTATAGATTTAAAGTTCAATTCAAAATAATATAAAATGACTACAAATCAG20.12618296529968456No Hit
CCTTTAAGATCCTGTTGCCGTTTAAGTCCTTATACTCAATAATACCCATG20.12618296529968456No Hit
ATGGTTTTGCCGAAGTCCATATGAGTCTATGTCTTTGTATCTTCTAACAA20.12618296529968456No Hit
ATCCACAATGCTGAGTAAAGGAAAACACATACCTCAGTAGTAACTGTGTA20.12618296529968456No Hit
ATGATACATATAGTAGTGGAGGCCTATGGGACAAAAAATAAATCCACTTG20.12618296529968456No Hit
AAGTAACCCTTTCCTTATATCGAAATCTTGTCAACTTTAAGTTCGTGAGA20.12618296529968456No Hit
GGCACAAACATCGGCGCTTGTTCACCTCTCGTCATCGCATTTGTTGCCTT20.12618296529968456No Hit
GTATGGAACGGGGACAGGGATTTCTTCTTGTTTTCTTTATTATTGATAGG20.12618296529968456No Hit
CTTTTGAAATATTTTTCTTTGTTAAGAATGTACAATTTGCGTATTTGAAT20.12618296529968456No Hit
ATCATAAGAGTTACTGATGGATTAAGAGTGTTTATACAATACTTATACCC20.12618296529968456No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)