FastQCFastQC Report
Tue 23 Aug 2022
HNCMMDSX3_n01_chi_005.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCMMDSX3_n01_chi_005.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences137
Sequences flagged as poor quality0
Sequence length151
%GC38

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAATGGTACCAAGAATAACTACTGGAAAAATATATAAAAGGTCGTTGG10.7299270072992701No Hit
GGAGGAGATGAAGAAAGAGATGGTTCAGCTGTGGCTGCGTACGGTGGTGG10.7299270072992701No Hit
GAAGTAACCCATGCTATACTCCCAGGAAAAGCTCGAACGACCTTCAACAA10.7299270072992701No Hit
CTCCTAATTTGATCACAATATCGAGGAAGAAGGCGATAATCTTCTTCATA10.7299270072992701No Hit
ACTATGAACAGCTATAACTCACGTGGAGAAAGTGAACAAACAAAAAAATT10.7299270072992701No Hit
ATAATATGAGATAAATCTTAGTAATCTAATTATGTAATATAGTAATCACC10.7299270072992701No Hit
GTATTGTCTCCGTTGAGTTCCACAACGATCCGCTGCGCCTTGCTCACCGT10.7299270072992701No Hit
ATCACTCCCGTATGATGTTGCCGCCTCCACCACCAACGAGAACACTCCAA10.7299270072992701No Hit
CATTATTGTATATGCGGAAACATTAGGATAACATTTTAAGATTTTTATGT10.7299270072992701No Hit
ACCTAGTATATCATAAATTTCAGAATTAAATGTATGTACGAGAAAAAAAA10.7299270072992701No Hit
GTAATGGGGAACATACTAAAGCTTTAGAATATTATTTTCGGGCATTAGAA10.7299270072992701No Hit
CATCGGGGAGTGAAATAGAACATGAAACCGTAAGATCCAAAGCAGAGGGA10.7299270072992701No Hit
CAAATATATATTTTAAATGCCATAAATCTGATTCAAAAAATCCATAAAAC10.7299270072992701No Hit
ACCAAGATCTGCACCGACGGCCGCTCCGCCCGGGCTCGCGCCCTAGGTTT10.7299270072992701No Hit
CTGACCTTCAGATATGTAGGGATGTTTTCGTAACCCAGAAGCTTAAAAAA10.7299270072992701No Hit
CTACCTATGGTATGCTGACATTGTTAATTACCTAGCTGCAGATGTGGAAC10.7299270072992701No Hit
GACTTCTTCCGCTTGATTAACACCATATTCTATTCTCGTAAGATGATACA10.7299270072992701No Hit
GTTCCTTAATAGGTGACCAGTAATTACTATTTTTGCTTTTTAGCATTTAA10.7299270072992701No Hit
CTTTTGCCTTTGGATTATCAAACGCAAACTCATCAAAAAAACTCACAAGA10.7299270072992701No Hit
GTTCTATTCATTGTTTGGTATAGAAAAAGTGAAGCAAAATCGCTATTAAA10.7299270072992701No Hit
AGACTGGTATGCCCCAAAAAGGAATTTTGGTTCACAACCGTAGTGGGAAT10.7299270072992701No Hit
TTTCTTATCTGTTGGCGTAAATGTGCAGGCGTAAATCTGAACAAGCTGGG10.7299270072992701No Hit
CCTTTGGAGAAATTGAGAGTAAAGGTGGGTTGGTCAGCACCAAGATAATT10.7299270072992701No Hit
AACAAGAAGTACTGGATTCTCTTTATGATAGGTCCTGAAAGGACAAGGAA10.7299270072992701No Hit
GAACTTAAACCGCAACCCGATCTTGTAAGCCTAAGTAGTGTATCCTTGTT10.7299270072992701No Hit
GTAGTAAGATGACTGAATCTAGAAATTATAGGTAAAATAAGATGGCATAT10.7299270072992701No Hit
GCCGGGTCATTTCGGGGCAAGCGGATCATTTATGATGAAAAGTATGAGCT10.7299270072992701No Hit
AAAGAGAAGTGGCACTGAGATCATTCAAGACTGGGCGGACACCTATTTTG10.7299270072992701No Hit
TTCCCGGACAGGGAAGACGCCCTTGTCCACTTACATTGCTCAAAAAGGGT10.7299270072992701No Hit
GGTTAAAATATTTATAAATTTTTTGGTTAACAATAAAATAGTATCCGAAC10.7299270072992701No Hit
TTATATCACANAAGCATGCATTAATATTTTAAATGTGTATTATGACTACT10.7299270072992701No Hit
GCAAAGGATTAGCTGTTTCTTGTTTTGTTATTTGATGTTTGTATTCTGTC10.7299270072992701No Hit
TTCATGCTTACTGCACAAGGGTTGTTAGCAGGAGTCATTTACCAAAAACG10.7299270072992701No Hit
CCATCAATGTGGACACTAGGAAATGCAGTAATGGGAGCATTACAGCTCAA10.7299270072992701No Hit
ATTATGAAATGGTGATCTTGCGATGCTGACATACTTGAATTTACGGAAAC10.7299270072992701No Hit
ATTCTACTGAGACTACAAAAAGCTTGGCGATCCATCAGAGGATAAAAAGT10.7299270072992701No Hit
GCTCTGTAGGATTTGAACCTACGACATTGGGGTTTGGAGACCCACGTTCT10.7299270072992701No Hit
CGATTGAAAGAGCTACTGGTTTATCTTTCCAGCGAATCAAATTTGCCAAA10.7299270072992701No Hit
GAGTATCCGTTTCCCTCCTTTTCCTGCTAGGATTGGAAATCCTGTATTTT10.7299270072992701No Hit
TATCGGTATTTTTTTATGGATTGCCATCTCAAGTATTGCTCCTATTGGAA10.7299270072992701No Hit
TTCGATGAACTGCCATACTTAACATCTCTACTGCTGTTTGAAACTGGAGC10.7299270072992701No Hit
CACTAGAGATGTGAACAGGTCTAAATATAGTCCAAAATTTTTATATCTTA10.7299270072992701No Hit
CTGCATAATATTGGCATTTTCACTTGACTTTATTGTCCTTGAATATTGTA10.7299270072992701No Hit
GTTATATATATGTTTATAATATATGGTGTCGACTTGAACTTAATTAGTCC10.7299270072992701No Hit
TTAATACAACACCAACATTATTGGATTCTAAATTAAGGGCAAAACCTATA10.7299270072992701No Hit
GAATACACATTGAATGCGAAGATTACGCATTTCATTTCTGGTAGTAGATC10.7299270072992701No Hit
TAGAGGAAGTGTTTTGTTTTCTTTCTCAACCAAATTCAGATTGAAATATA10.7299270072992701No Hit
GATTTACATTTATTTAAACTGCCAAATAAAAGTGGAAAGGTTGTAGTTGT10.7299270072992701No Hit
CCTTGTAATATATCAACAAAAACTGGTGAGCGGTCAAGAACATTGATATC10.7299270072992701No Hit
TAAGTGGCTAAAGTGATGATAAAATCAAAACATGTTACACATATTTCTTG10.7299270072992701No Hit
ATTTATACAGAACTGCTCGAAGCTATTTTTCTGCAGAGGAATGAAAGTCG10.7299270072992701No Hit
ACCTTGAATGCTTAGATCTATGTTGTAATGTTGTTTAATTATCTATTAAA10.7299270072992701No Hit
CCCTAGACAGAGCGATCCCAAAATTTCTAGCAACAACACACAAATACTTT10.7299270072992701No Hit
TTTGTACACGAAACCACAACTTAATCGGTAGCAAGCTTTACATTTGAATA10.7299270072992701No Hit
GTTTAAGGGTTTAATCTATAAAAATTAGGTTTATATTGTGGGGTTACGAA10.7299270072992701No Hit
GTGATAATGGAACCAACCAGCAAAAAGCATTAAGGCTGCGAAGACCAATG10.7299270072992701No Hit
ATATAGGCCTTATCCATACAAGTAATGGGGAACATACTAAAGCTTTAGAA10.7299270072992701No Hit
GCTTACAACAGACACATGGTGTTCTTCTGGAGGTTTAACCGTAAACGGTA10.7299270072992701No Hit
GGTTGTCTGAGATTACATAAGCAATGAGGTATGAATAATAAAGTTATCAT10.7299270072992701No Hit
CCATTAGCATCATTGGTGTTCCCTGATCATTGATCACCATCGGTTTCATA10.7299270072992701No Hit
GCTAAACTTGAAGCAGAAAAGGAATAATAAAAAAAAGATAAGGAACAATA10.7299270072992701No Hit
CAAAGCGTTTGAGCTTAAATAAGAACAAATCAAAGATTAAACAGGCGAAA10.7299270072992701No Hit
GAATACTTGTCTTGTTAAAATCACTCTTAAGTGTGCGTTAGATATAATTG10.7299270072992701No Hit
CGTCCTGGTCGACAAACCCTCGACCACTCCTCGGACCCGGTCGATGAAGT10.7299270072992701No Hit
AATTTACATAGTTCCAAGTTCCAATGGCTAGGTCAAGGATAGACTTATTT10.7299270072992701No Hit
ATCGGAAAACTCAACGACTTCTACTGTCTCTTCTTTCGCCAACAAGATTC10.7299270072992701No Hit
TTCTTCTCCTTCAAGGCACTCTACGTGATCAAACTGATCAAAAGTGAGGA10.7299270072992701No Hit
GAATATGCAAATCTTAAAAGAAAATAACCTTAAAAATGAAACTCTGATCT10.7299270072992701No Hit
ATGAACGTGCTCTACAGCCTGCAGCACCTCGGCTACACCATCCCGCCGCA10.7299270072992701No Hit
GAATAAAAACAATCTAGAAAAAAAACAAATAGCAATGAATAAAAATTTTA10.7299270072992701No Hit
GACCTAAGAGCACCTCCAATGGTGTATGTTAGGTGTATCTTAGAATAATA10.7299270072992701No Hit
TCTCCGGGGAGGCGAATGCCAGCCGTTCGTTTGCATTTTCCTTGACACTT10.7299270072992701No Hit
GTGATCCATCGAGATGTGTGTACATCAAGGATTATTTCATCACTCCTTTG10.7299270072992701No Hit
CTACAAGACACCACACAAACATTCAATGAAGAAGAACAAAACATCTAAAA10.7299270072992701No Hit
GACGGAAATAACGATATAACATTTATAACAAGATAACTGGAAGTTCCAAC10.7299270072992701No Hit
AATTACTAATTTTTATAAAAAATAAAAGCAAAAAAAAATAAAAAATTTTT10.7299270072992701No Hit
ACTTGAACCACCCTTTTTCTGAACCCACCTCACATCAATAACTCGACCTC10.7299270072992701No Hit
ATTTTATTAAAATCATATAATATGTATAAAAAGAAAGAGAATATCTAGAG10.7299270072992701No Hit
CATAGGAACCCGGCTTCGCTAACCTTTCTTACTTAGTCGTGAAACAACTG10.7299270072992701No Hit
GGTTCTAGGTTAGCGCGCAGTTGGGCACCGTAACCCGGCTTCCGGTTCAT10.7299270072992701No Hit
AAATATGGTAGACTAACTGATCTTTCGATCAGTTAATGAAAGAGCCCAAT10.7299270072992701No Hit
AATATATTCAGAGAGGGATTAAAACTGCATTACGGATCTAGAGATTGGGT10.7299270072992701No Hit
GTTCTAACCATTCGTTTGATCGATAATCAAACAAACAGTTGAATCTTCTT10.7299270072992701No Hit
GTATAAAACGGTTAATAAGCGTAACTGATAACATNGAAAATAGATTCATA10.7299270072992701No Hit
ATCCGTAACTTTACAAAACATATTTGAGTGACATTCAAATTTTGCAGATA10.7299270072992701No Hit
AATTTCACCATAGCGGCAACTTGTTCAAAACAATATTAACAAGTTTTGAT10.7299270072992701No Hit
TAAATAAACAGCTCTTGTTGTGTCGGTCCAAAACCTTTCAAATTTATCTT10.7299270072992701No Hit
GAGGGTAGTCGTCCTTCAACGTACTTTTCACCCTCAATTTGGGGCGATCA10.7299270072992701No Hit
GTAAAACATACTGAAACTCTAGTTCCTGTTTTCAACTCAACTCGCACACT10.7299270072992701No Hit
TTTATATACTTAGAAGAAGTTGAAATTAAAAAAGTAAAAGAGATAATTTA10.7299270072992701No Hit
GAGTCTGCAAAGTGATTGATGAATTGTTTGCGTTAGATAGAAATATGGAA10.7299270072992701No Hit
GTATAGTTATGACATGAGAGAATCTGTGTCTACTGATGTAGGGTGGAGAG10.7299270072992701No Hit
ATTGATACACATTCAGCATTTGAAGATTGCATATTCAGCCTTTCTTTAGC10.7299270072992701No Hit
CCATCGAGACCAAGAGGTAGACCAAGGATAAATCAGGTATAGACTTCTTT10.7299270072992701No Hit
CTATTCTCTCCTCTCTCTAGTCGATTGTTAAATGTGTAAGACAGGTTTTT10.7299270072992701No Hit
GTTTCTAAATAGAGTGAAATTAGAATCTAATGGATATGAATTGATGTAGA10.7299270072992701No Hit
CCCTCAAACAAAAGGGTGGTAGCTGAGGGTAGCTAATCTTTTGGAAACAG10.7299270072992701No Hit
TAGAAATAGAGAATCCTTTTTTTATTTTGTCTCGTCAAAACAAAAACACA10.7299270072992701No Hit
CACTTTGAGTGGGCAATTGGATCCGGAGAAGGAAAATGTGATATCCTCAA10.7299270072992701No Hit
GTACAAAAATGAGTAATAACCCCCAATAGAGACTGGTACGATTTAATTCA10.7299270072992701No Hit
GTACCCAAATCAGGTGAGGTGGACGTCTCTTAAATCATGGCTTCTCCAAA10.7299270072992701No Hit
GGTACAGATCAGGCAATCAGGACACACTTTCCTGGACTCTCTTGTAGTCG10.7299270072992701No Hit
CCTTTTCCCCGCCATTTTCTTCTGGCTCCAGATCTGAAAATCAAGACCAT10.7299270072992701No Hit
GCAGAAAAAAGACTCTCGAGCTCTGATATATCTATGTCTGGGGCCCTGTC10.7299270072992701No Hit
CACTACTCAGAGACGATACAAATTGATAAAATCATCATTACCCAAAGTAT10.7299270072992701No Hit
GCATCTACTCGACCAATTGATCACTTTGAGCATAAACGCAAAGGCGCAGA10.7299270072992701No Hit
GAATTAATAAGTAGGAACAACTTCGTAATTCATTAGATATTGACAAAAGT10.7299270072992701No Hit
ATTTTGCTGTATCCAGACTAATACCAATCCAACCCATTTCATGAATAAAA10.7299270072992701No Hit
ATAAACCACAAAAAAACCAACCAGAATGCGTAAATAATTCAAAAAATGAA10.7299270072992701No Hit
AAACAAACTAATCCACACTTTTGGAGAAAAAAAAGACTTTAAAAATTCTT10.7299270072992701No Hit
GATTAAAATTTTATTTTAGTTAAAAAATTGAATCAATAGTAGAAAGAGAA10.7299270072992701No Hit
ATGTTCTTCTCCTGATCTTTGATCAAAATGCTTGATCCATTTTCTTTTGT10.7299270072992701No Hit
AGCAGCAACCGACCCACTTGCAGACTGCAAGCAAGTAGCACGACGCTTAA10.7299270072992701No Hit
AAATAAAATAAAGAGTATTTTTTTTTTGTTCTCGAGTATATTCATTAATG10.7299270072992701No Hit
GTATCATTTTAATATATGACTTAGGTCTATGTCAATGAAAAGAAACTCAA10.7299270072992701No Hit
GCGTAAATTGATTGTATATGATGAAAAATATAAACAGACTAATGTTGTTG10.7299270072992701No Hit
CATATAACGTTTCTTATCTCCTATCTTTTGAAATTGAGCTGATTCGATCT10.7299270072992701No Hit
ATCTAANCTAATATTGATTGAATGTCTGAGCATTCCGAGACTTTCATGAG10.7299270072992701No Hit
ATGTAATTCCTCGTTCGTATCAGCGATTCCACCCAAAGCATTAGAGACGA10.7299270072992701No Hit
GTAATATTTTCCAATGAGAGTCCGGTATCTGTAAGATGCAATGATGCAGC10.7299270072992701No Hit
GTTCTAGAGTCATACATTTTAACAAAAAAAAGAGAAAATACGAAAAAAAA10.7299270072992701No Hit
AATTTTATTCATACAAAGTTCGAAAGATATTGATATAAACGCATGTAGAG10.7299270072992701No Hit
GTGCTATTACTGTTTTGGCATTTCTAATTTCCGGAGTTTTATCTCCAATT10.7299270072992701No Hit
AATTAAAGCACCTGATTCTCGAGAGAAGCCAAGTGGGACAAAGAAGAAAC10.7299270072992701No Hit
CCTCGAAGTCCTTCATGATTCCAGAGGTTTCAGCAGGCTTCAAGTATAGC10.7299270072992701No Hit
GCATATCGCGACAATCTGAAAGATCTTATTACGGTGTTCCATCTTCTGGC10.7299270072992701No Hit
GTCCAAAACCAAGAACCTGTAATGCCTTGAGAACATGCTCAAGAGCAATC10.7299270072992701No Hit
TAGTGAAGAACGATGAATCAGCTCAGAGAGCAATGGAACCAGTTCAAAAA10.7299270072992701No Hit
CGTTTTGCCAAAAAGCCATTTATTTTATTAATATTAATTTTATTAATGAT10.7299270072992701No Hit
GTAAAGGAAGAGTCATGGTCGATGAGTACTTGCGGATTAGAGGTCGAAGC10.7299270072992701No Hit
TTTTCCTTGTGAATCCAAAAGCTGATTTGCAAGAACTACAAGCGGTTTGA10.7299270072992701No Hit
ACACAGAACATAGTGACAAAAATGTACGTACACTTGTGGCAGGTACGTGA10.7299270072992701No Hit
GTTAGTACCTAATATCTTATATAGTTATATATAACAAGGTCTTCAATTGT10.7299270072992701No Hit
TAAGGGATGTGATGAGCCATATGGGATTTGATACAACGTGGATTGGCTGG10.7299270072992701No Hit
GAGTAAAAGGAACCCGAGCTCCTTCAAATTTTATGATCTCTTGAACCACA10.7299270072992701No Hit
GTGTTACTACATGCAATGTAATCGTATCTATTCTTTTTTAAAGACTTTCT10.7299270072992701No Hit
GTCTTAAACAAATAAGAATGCCCACCCCGCCAAGCGAGTACGAGAACAAC10.7299270072992701No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)