FastQCFastQC Report
Mon 5 Feb 2024
HNCJWDRX3_n02_Nov_G3_DIP_PC_1wkTYM3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCJWDRX3_n02_Nov_G3_DIP_PC_1wkTYM3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14605787
Sequences flagged as poor quality0
Sequence length101
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG187610312.844929205115754No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAA1210540.8288084716010167No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGA1016620.6960391795389047No Hit
AGTATGGCCCGGGGGATCCTACGTTCCAAATGCAGCGAGCTCGTATAACC960430.6575681269348923No Hit
GTACTGGATGCATCTGCAGGATATCGCGGCCGCTCGACGTAGAACTCAAT920620.6303118072309284No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGG774280.530118644068957No Hit
GGGGGATCCTACGTTCCAAATGCAGCGAGCTCGTATAACCCTTTAAGAGT726760.4975835947765088No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAAA538160.36845669459646374No Hit
GTTTGGTCAAGTCCTGCAACGAGCGCAACCCCTATCTTTAGTTACTAACA471140.3225707728039578No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGG436640.2989499983807788No Hit
GGGCCATACTAGTACTGGATGCATCTGCAGGATATCGCGGCCGCTCGACG420410.2878379644999616No Hit
GTTAAATCCCGGGGCTCAACCCCGGCTCGCTTTGGATACTAGCAAACTAG408420.2796288895627466No Hit
GTCAAATCATCATGCCTCTTACGAGTGGGGCCACACACGTGCTACAATGG328100.2246369880650731No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG310120.2123267989598917No Hit
CTGCAGGATATCGCGGCCGCTCGACGTAGAACTCAATCTAAAACTTCGAT304290.2083352304124386No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAG300220.20554866369063168No Hit
CTAGAGATACTGCCTGGGTAACTGGGAGGAAGGTGGGGATGACGTCAAAT293360.20085189521112418No Hit
CTAACATTAAGTTGAGGACTCTAGAGATACTGCCTGGGTAACTGGGAGGA277440.18995210597005147No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT271770.18607008304311162No Hit
GGTTCGTCCACCCAGGGTTAGTCGGGTCCTAAGACGAGGCCGAAAGGCGT246610.16884403421739616No Hit
GCCACACACGTGCTACAATGGTCGGTACAAAGAGAAGCAATATGGCGACA242880.16629025193917998No Hit
GGCCATACTAGTACTGGATGCATCTGCAGGATATCGCGGCCGCTCGACGT240830.16488669867635342No Hit
CCTATCTTTAGTTACTAACATTAAGTTGAGGACTCTAGAGATACTGCCTG237810.162819025089165No Hit
AGCAAATCTCAAAAAGCCGATCTCAGTTCGGATTGGAGTCTGCAATTCGA228280.15629421406734195No Hit
GGACTCTAGAGATACTGCCTGGGTAACTGGGAGGAAGGTGGGGATGACGT225960.1547058025698992No Hit
CACACGTGCTACAATGGTCGGTACAAAGAGAAGCAATATGGCGACATGGA223340.152911993033994No Hit
GTCAAGTCCTGCAACGAGCGCAACCCCTATCTTTAGTTACTAACATTAAG222440.15229579891860673No Hit
GAATCACTGACGCAGCTAACGCATTAAATGATCCGCCTGAGTAGTATGCT221620.15173437761347608No Hit
CTGGGAGGAAGGTGGGGATGACGTCAAATCATCATGCCTCTTACGAGTGG213270.14601746554293854No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGG211490.14479877051472817No Hit
AGAGATACTGCCTGGGTAACTGGGAGGAAGGTGGGGATGACGTCAAATCA200740.13743867413649125No Hit
GCGACATGGAGCAAATCTCAAAAAGCCGATCTCAGTTCGGATTGGAGTCT196700.13467264721853056No Hit
GCAAATCTCAAAAAGCCGATCTCAGTTCGGATTGGAGTCTGCAATTCGAC193030.1321599445480069No Hit
GTGGGGATGACGTCAAATCATCATGCCTCTTACGAGTGGGGCCACACACG189690.12987317971979187No Hit
ATTAAGTTGAGGACTCTAGAGATACTGCCTGGGTAACTGGGAGGAAGGTG184780.12651149849029017No Hit
CTTACCCACTCTTGACATCCTTCGCAAAGCTATAGAGATATAGTGGAGGT182810.12516271803772025No Hit
CTCAGTTCGGATTGGAGTCTGCAATTCGACTCCATGAAGTCGGAATCGCT182720.12510109862618154No Hit
GCAGGATATCGCGGCCGCTCGACGTAGAACTCAATCTAAAACTTCGATTT181420.12421104045951101No Hit
TCTAGAGATACTGCCTGGGTAACTGGGAGGAAGGTGGGGATGACGTCAAA179720.12304711824155726No Hit
GGACAGTGTGTGGTGGGTAGTTTGACTGGGGCGGTCGCCTCCTAAAGGGT178190.1219995882453989No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGG176640.12093836504667636No Hit
ACTGGATGCATCTGCAGGATATCGCGGCCGCTCGACGTAGAACTCAATCT176280.12069188740052145No Hit
GGGAGACGTTGATGCTTGAACGCTAGTTTAAGAGTAGTCGCCGTTGAAAT175670.12027424472231452No Hit
GGGGATCCTACGTTCCAAATGCAGCGAGCTCGTATAACCCTTTAAGAGTT173170.11856259440179431No Hit
CAAAGAGAAGCAATATGGCGACATGGAGCAAATCTCAAAAAGCCGATCTC168930.11565963545819202No Hit
AAGCAATATGGCGACATGGAGCAAATCTCAAAAAGCCGATCTCAGTTCGG168680.11548847042614No Hit
CTCAAAAAGCCGATCTCAGTTCGGATTGGAGTCTGCAATTCGACTCCATG168230.11518037336844635No Hit
GGCGACATGGAGCAAATCTCAAAAAGCCGATCTCAGTTCGGATTGGAGTC165400.11324278520561747No Hit
GTTCGGATTGGAGTCTGCAATTCGACTCCATGAAGTCGGAATCGCTAGTA164410.11256497167869146No Hit
CTGGAGTTAAATCCCGGGGCTCAACCCCGGCTCGCTTTGGATACTAGCAA160500.10988795057739785No Hit
GTTGAGGACTCTAGAGATACTGCCTGGGTAACTGGGAGGAAGGTGGGGAT159300.10906635842354813No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGG157360.10773811777482446No Hit
GTTTCTTAAACAGCTAGGATGTTGGCTTAGAAGCAGCCACCGTTTAAAGA155370.10637564411969036No Hit
GTCGGTACAAAGAGAAGCAATATGGCGACATGGAGCAAATCTCAAAAAGC150380.10295919007993201No Hit
GGGAGGAAGGTGGGGATGACGTCAAATCATCATGCCTCTTACGAGTGGGG148780.10186373387479908No Hit
GTCTGGAGTTAAATCCCGGGGCTCAACCCCGGCTCGCTTTGGATACTAGC148680.10179526786197826No Hit
GTTAGATAGAGGTAAGCGGAATTCCATGTGAAGCGGTGAAATGCGTAGAT148230.10148717080428463No Hit
GAGATACTGCCTGGGTAACTGGGAGGAAGGTGGGGATGACGTCAAATCAT148210.10147347760172047No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)