FastQCFastQC Report
Mon 5 Feb 2024
HNCJWDRX3_n02_Nov_G3_DIP_PC_1wkTYM2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCJWDRX3_n02_Nov_G3_DIP_PC_1wkTYM2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21819567
Sequences flagged as poor quality0
Sequence length101
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG15272516.9994560387014095No Hit
AGTATGGCCCGGGGGATCCTACGTTCCAAATGCAGCGAGCTCGTATAACC1856390.8507914020475291No Hit
GTACTGGATGCATCTGCAGGATATCGCGGCCGCTCGACGTAGAACTCAAT1786000.8185313668231822No Hit
GGGGGATCCTACGTTCCAAATGCAGCGAGCTCGTATAACCCTTTAAGAGT1259000.5770050340595668No Hit
GTACTGGATGCATCTGCAGGATATCGCGGCCGCCATCTGCCCTACGTTTG1137310.5212339914902986No Hit
AGTATGGCCCGGGGGATCCTTATCTGTCAAAACCGCTAATGTCCGTTCTA1106900.5072969596509408No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAA887930.4069420809313036No Hit
GGGCCATACTAGTACTGGATGCATCTGCAGGATATCGCGGCCGCTCGACG816120.3740312536907813No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAAA806490.3696177838909452No Hit
GTTTGGTCAAGTCCTGCAACGAGCGCAACCCCTATCTTTAGTTACTAACA799360.3663500746829669No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGA752780.3450022633354732No Hit
GGGGGATCCTTATCTGTCAAAACCGCTAATGTCCGTTCTAAGACCGTCTG692360.31731152135145485No Hit
GTTAAATCCCGGGGCTCAACCCCGGCTCGCTTTGGATACTAGCAAACTAG639510.29309014243958187No Hit
GTCAAATCATCATGCCTCTTACGAGTGGGGCCACACACGTGCTACAATGG482540.22115012639801696No Hit
GGGCCATACTAGTACTGGATGCATCTGCAGGATATCGCGGCCGCCATCTG461590.21154865263824896No Hit
GGTTCGTCCACCCAGGGTTAGTCGGGTCCTAAGACGAGGCCGAAAGGCGT418570.19183240437356067No Hit
GGCCATACTAGTACTGGATGCATCTGCAGGATATCGCGGCCGCTCGACGT411770.18871593556370755No Hit
GTCAAGTCCTGCAACGAGCGCAACCCCTATCTTTAGTTACTAACATTAAG400640.18361500940875683No Hit
AGTATGGCCCGGGGGATCCTAGAGACCATTCGCGATTCCATGAGACTCCA398350.18256549270661512No Hit
GTACTGGATGCATCTGCAGGATATCGCGGCCGCGTCTTCAGAGGGGGATA380720.1744855890128342No Hit
CTAGAGATACTGCCTGGGTAACTGGGAGGAAGGTGGGGATGACGTCAAAT369190.16920134116318622No Hit
CTAACATTAAGTTGAGGACTCTAGAGATACTGCCTGGGTAACTGGGAGGA351160.16093811577470807No Hit
GCCACACACGTGCTACAATGGTCGGTACAAAGAGAAGCAATATGGCGACA345420.15830744945580266No Hit
GGACAGTGTGTGGTGGGTAGTTTGACTGGGGCGGTCGCCTCCTAAAGGGT344220.15775748437171094No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGG334030.15308736419929872No Hit
CCTATCTTTAGTTACTAACATTAAGTTGAGGACTCTAGAGATACTGCCTG319530.14644195276652372No Hit
AGCAAATCTCAAAAAGCCGATCTCAGTTCGGATTGGAGTCTGCAATTCGA317520.1455207612506701No Hit
CTTACCCACTCTTGACATCCTTCGCAAAGCTATAGAGATATAGTGGAGGT311590.1428030171267835No Hit
GGGAGACGTTGATGCTTGAACGCTAGTTTAAGAGTAGTCGCCGTTGAAAT306200.14033275729073816No Hit
GGCCATACTAGTACTGGATGCATCTGCAGGATATCGCGGCCGCCATCTGC303250.138980759792346No Hit
GCGACATGGAGCAAATCTCAAAAAGCCGATCTCAGTTCGGATTGGAGTCT302510.13864161465715613No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGG295060.13522724809342002No Hit
CACACGTGCTACAATGGTCGGTACAAAGAGAAGCAATATGGCGACATGGA292210.13392108101870215No Hit
GGGGATCCTACGTTCCAAATGCAGCGAGCTCGTATAACCCTTTAAGAGTT291210.13346277678195906No Hit
GTGGGGATGACGTCAAATCATCATGCCTCTTACGAGTGGGGCCACACACG288280.13211994536830177No Hit
CTGGGAGGAAGGTGGGGATGACGTCAAATCATCATGCCTCTTACGAGTGG287570.13179454936021417No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGG279060.12789438030553035No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG275700.12635447807007352No Hit
GGACTCTAGAGATACTGCCTGGGTAACTGGGAGGAAGGTGGGGATGACGT274190.12566243867259144No Hit
GAATCACTGACGCAGCTAACGCATTAAATGATCCGCCTGAGTAGTATGCT272820.1250345618682534No Hit
AGAGATACTGCCTGGGTAACTGGGAGGAAGGTGGGGATGACGTCAAATCA269700.12360465264961491No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGG255760.11721589158941606No Hit
TCTAGAGATACTGCCTGGGTAACTGGGAGGAAGGTGGGGATGACGTCAAA252640.11578598237077756No Hit
CTGCAGGATATCGCGGCCGCTCGACGTAGAACTCAATCTAAAACTTCGAT249650.1144156527029157No Hit
GCAAATCTCAAAAAGCCGATCTCAGTTCGGATTGGAGTCTGCAATTCGAC248310.11380152502567993No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGG247740.11354029161073635No Hit
GGGGGATCCTAGAGACCATTCGCGATTCCATGAGACTCCAAGGGTTCTGC245130.11234411755283687No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAAAA244850.1122157923665488No Hit
ATTAAGTTGAGGACTCTAGAGATACTGCCTGGGTAACTGGGAGGAAGGTG244710.11215162977340476No Hit
GTTTCTTAAACAGCTAGGATGTTGGCTTAGAAGCAGCCACCGTTTAAAGA241560.110707971427664No Hit
GTCGGGTCCTAAGACGAGGCCGAAAGGCGTAGCCGATGGACAACAGGTTA239040.10955304475107137No Hit
AAGCAATATGGCGACATGGAGCAAATCTCAAAAAGCCGATCTCAGTTCGG238590.10934680784453697No Hit
GTCTGGAGTTAAATCCCGGGGCTCAACCCCGGCTCGCTTTGGATACTAGC236070.10819188116794436No Hit
GTTGAGGACTCTAGAGATACTGCCTGGGTAACTGGGAGGAAGGTGGGGAT233940.10721569314368154No Hit
ACTGGATGCATCTGCAGGATATCGCGGCCGCTCGACGTAGAACTCAATCT228240.10460335899424586No Hit
CCTTACCCACTCTTGACATCCTTCGCAAAGCTATAGAGATATAGTGGAGG227620.10431921036746512No Hit
CAAAGAGAAGCAATATGGCGACATGGAGCAAATCTCAAAAAGCCGATCTC226380.10375091311390368No Hit
GTCAGCTCGTGTCGTGAGATGTTTGGTCAAGTCCTGCAACGAGCGCAACC224500.10288930114882663No Hit
GGCGACATGGAGCAAATCTCAAAAAGCCGATCTCAGTTCGGATTGGAGTC221920.10170687621802944No Hit
GGGAAGGATAATTTTACCACTAATTGGATTGTGGGGTAAGTAACAACTGG221160.10135856499810468No Hit
GTTTGATTTAACATGTGTAGGATAGGTGGGAGACGTTGATGCTTGAACGC220070.1008590133800547No Hit
GTCGGTTCCAAGGGTTGGGCTGTTCGCCCATTAAAGCGGTACGCGAGCTG219630.10065735951588775No Hit
AGATGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTTGGTCAAGT219150.10043737348225104No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)