FastQCFastQC Report
Mon 5 Feb 2024
HNCJWDRX3_n02_Nov_G3_DIP_PC_1wkDIP3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCJWDRX3_n02_Nov_G3_DIP_PC_1wkDIP3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10112208
Sequences flagged as poor quality0
Sequence length101
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG101432210.030667881831544No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG983450.9725373528709061No Hit
AGTATGGCCCGGGGGATCCTACGTTCCAAATGCAGCGAGCTCGTATAACC648110.6409183830079445No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT634070.6270341749299461No Hit
GTACTGGATGCATCTGCAGGATATCGCGGCCGCTCGACGTAGAACTCAAT611290.6045069484330227No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGA519360.5135970304408296No Hit
GGGGGATCCTACGTTCCAAATGCAGCGAGCTCGTATAACCCTTTAAGAGT496580.4910698039439062No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAA472630.46738556010714966No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTG385100.3808268184356967No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGG329490.3258338831637957No Hit
GGGCCATACTAGTACTGGATGCATCTGCAGGATATCGCGGCCGCTCGACG317350.31382859213338965No Hit
GTTTGGTCAAGTCCTGCAACGAGCGCAACCCCTATCTTTAGTTACTAACA292880.2896301183678184No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGG285200.28203533788070817No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGG284670.2815112189148008No Hit
GTTAAATCCCGGGGCTCAACCCCGGCTCGCTTTGGATACTAGCAAACTAG265440.2624946005857475No Hit
CTGCAGGATATCGCGGCCGCTCGACGTAGAACTCAATCTAAAACTTCGAT261050.2581533133020998No Hit
GGTTCGTCCACCCAGGGTTAGTCGGGTCCTAAGACGAGGCCGAAAGGCGT194300.19214399070905186No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAG183450.18141438546359015No Hit
GTTTCTTAAACAGCTAGGATGTTGGCTTAGAAGCAGCCACCGTTTAAAGA176710.1747491744631835No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAAA176440.17448217046168354No Hit
CTAACATTAAGTTGAGGACTCTAGAGATACTGCCTGGGTAACTGGGAGGA176330.17437339105366503No Hit
CCTATCTTTAGTTACTAACATTAAGTTGAGGACTCTAGAGATACTGCCTG171380.16947831769283228No Hit
AGCAAATCTCAAAAAGCCGATCTCAGTTCGGATTGGAGTCTGCAATTCGA167850.1659874875991475No Hit
GGGAGACGTTGATGCTTGAACGCTAGTTTAAGAGTAGTCGCCGTTGAAAT167500.16564137130090678No Hit
CTAGAGATACTGCCTGGGTAACTGGGAGGAAGGTGGGGATGACGTCAAAT159320.15755213895916698No Hit
GTCAAATCATCATGCCTCTTACGAGTGGGGCCACACACGTGCTACAATGG159120.15735435821731514No Hit
GAATCACTGACGCAGCTAACGCATTAAATGATCCGCCTGAGTAGTATGCT157970.15621711895166712No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGG155460.1537349706414267No Hit
GGCCATACTAGTACTGGATGCATCTGCAGGATATCGCGGCCGCTCGACGT142600.14101766894035409No Hit
GCCACACACGTGCTACAATGGTCGGTACAAAGAGAAGCAATATGGCGACA136670.13515346994444735No Hit
CACACGTGCTACAATGGTCGGTACAAAGAGAAGCAATATGGCGACATGGA132470.13100007436555894No Hit
CTCAGTTCGGATTGGAGTCTGCAATTCGACTCCATGAAGTCGGAATCGCT130490.12904204502122582No Hit
GGACAGTGTGTGGTGGGTAGTTTGACTGGGGCGGTCGCCTCCTAAAGGGT127590.1261742242643743No Hit
CTTACCCACTCTTGACATCCTTCGCAAAGCTATAGAGATATAGTGGAGGT125690.12429530721678192No Hit
TCTAGAGATACTGCCTGGGTAACTGGGAGGAAGGTGGGGATGACGTCAAA124500.12311851180276355No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGG124240.12286139683835616No Hit
GGACTCTAGAGATACTGCCTGGGTAACTGGGAGGAAGGTGGGGATGACGT123480.12210983001931923No Hit
CAAAGAGAAGCAATATGGCGACATGGAGCAAATCTCAAAAAGCCGATCTC123340.12197138350002294No Hit
CTGGGAGGAAGGTGGGGATGACGTCAAATCATCATGCCTCTTACGAGTGG122700.12133848512609709No Hit
CTCAAAAAGCCGATCTCAGTTCGGATTGGAGTCTGCAATTCGACTCCATG122190.12083414423437493No Hit
GCAAATCTCAAAAAGCCGATCTCAGTTCGGATTGGAGTCTGCAATTCGAC122030.12067591964089347No Hit
GGGAAGGATAATTTTACCACTAATTGGATTGTGGGGTAAGTAACAACTGG119730.11840144110959742No Hit
ACTGGATGCATCTGCAGGATATCGCGGCCGCTCGACGTAGAACTCAATCT113950.11268557767007957No Hit
CTACGTTCCAAATGCAGCGAGCTCGTATAACCCTTTAAGAGTTGCTCTTT110130.10890796550070965No Hit
GAAAACTATTGTCAAGGAACTCTGCAAATTCATCCCGTAAGTTCGCAAGA109120.10790917275435791No Hit
GTTTAAAGAGTGCGTAATAGCTCACTAGTCGAGAGACTTTGTGCCGATAA108300.1070982717127654No Hit
AAGCAATATGGCGACATGGAGCAAATCTCAAAAAGCCGATCTCAGTTCGG108070.1068708238596358No Hit
GCAGGATATCGCGGCCGCTCGACGTAGAACTCAATCTAAAACTTCGATTT107770.10657415274685805No Hit
ATTAAGTTGAGGACTCTAGAGATACTGCCTGGGTAACTGGGAGGAAGGTG107440.10624781452280253No Hit
GTCGGGTCCTAAGACGAGGCCGAAAGGCGTAGCCGATGGACAACAGGTTA107440.10624781452280253No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTAA105340.10417111673335833No Hit
GTCTGGAGTTAAATCCCGGGGCTCAACCCCGGCTCGCTTTGGATACTAGC103160.1020153066471734No Hit
GGGGATCCTACGTTCCAAATGCAGCGAGCTCGTATAACCCTTTAAGAGTT102000.10086817834443279No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)