FastQCFastQC Report
Mon 5 Feb 2024
HNCJWDRX3_n02_Nov_G3_DIP_PC3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCJWDRX3_n02_Nov_G3_DIP_PC3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11110143
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG4755124.279980914737101No Hit
GGGGGATCCTACGTTCCAAATGCAGCGAGCTCGTATAACCCTTTAAGAGT657840.5921075903343459No Hit
AGTATGGCCCGGGGGATCCTACGTTCCAAATGCAGCGAGCTCGTATAACC592740.533512484942813No Hit
GTACTGGATGCATCTGCAGGATATCGCGGCCGCTCGACGTAGAACTCAAT573470.5161679737155499No Hit
GGGCCATACTAGTACTGGATGCATCTGCAGGATATCGCGGCCGCTCGACG465960.4194005423692566No Hit
GTTAAATCCCGGGGCTCAACCCCGGCTCGCTTTGGATACTAGCAAACTAG255170.2296730114094841No Hit
CTGCAGGATATCGCGGCCGCTCGACGTAGAACTCAATCTAAAACTTCGAT242250.21804399817356088No Hit
GTTTGGTCAAGTCCTGCAACGAGCGCAACCCCTATCTTTAGTTACTAACA238580.2147407103580935No Hit
GGCCATACTAGTACTGGATGCATCTGCAGGATATCGCGGCCGCTCGACGT219530.19759421638407354No Hit
CTTGGGTCTGGAAGTCGATGAAGGACGTGATTACCTGCGATAAGCCTCGG197170.17746846282716613No Hit
GTTTCTTAAACAGCTAGGATGTTGGCTTAGAAGCAGCCACCGTTTAAAGA180090.16209512334809734No Hit
GGACAGTGTGTGGTGGGTAGTTTGACTGGGGCGGTCGCCTCCTAAAGGGT176560.15891784651196658No Hit
GGGAGACGTTGATGCTTGAACGCTAGTTTAAGAGTAGTCGCCGTTGAAAT174920.15744171789688036No Hit
GTTTTTGGTGGATGCCTTGGGTCTGGAAGTCGATGAAGGACGTGATTACC173470.15613660418232242No Hit
GTTTAGCCGGGTCGAGAGACTGAACGGCCACATTGGGACTGAGATACGGC165890.14931400972966774No Hit
ACTGGATGCATCTGCAGGATATCGCGGCCGCTCGACGTAGAACTCAATCT161630.14547967564413886No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAA158740.1428784489992613No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGA157280.14156433450046504No Hit
CCTGGCTCAGGATGAACGCTGGCTGTGTGCCTAATACATGCATGTCGAGC154520.13908011805068576No Hit
GGTTCGTCCACCCAGGGTTAGTCGGGTCCTAAGACGAGGCCGAAAGGCGT151410.1362808741525649No Hit
AGGTGATCTACCCATGAGCAGGTTGAAACTTAGGTAACACTAAGTGGAGG151220.13610985925203664No Hit
TGAACGGCCACATTGGGACTGAGATACGGCCCAAACTCCTACGGGAGGCA145260.13074539184599154No Hit
GAAAACTATTGTCAAGGAACTCTGCAAATTCATCCCGTAAGTTCGCAAGA142710.12845019186521722No Hit
GGAACATTAGTTAGTTGGTGAGGTAATGGCCCACCAAGACTATGATGTTT139010.12511990169703488No Hit
GAATCACTGACGCAGCTAACGCATTAAATGATCCGCCTGAGTAGTATGCT138570.12472386719054832No Hit
GGGAAGGATAATTTTACCACTAATTGGATTGTGGGGTAAGTAACAACTGG136790.12312172759612544No Hit
AGTCGATGAAGGACGTGATTACCTGCGATAAGCCTCGGTTAGCTGGAAAT136150.1225456774048723No Hit
GTGAAATTCCCGTAAGCGAAATGTATAAATCTCCTAGCAGTATCCTGAGT135980.12239266407282065No Hit
GGGGGATCCTTATCTGTCAAAACCGCTAATGTCCGTTCTAAGACCGTCTG134280.12086253075230444No Hit
GGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGATCATTAGTCGGT132010.11881935273020337No Hit
GTGAAAAGAACCCCGGGAGGGGAGTGAAATAGATTCTGAAACCAATTACT129170.11626313000651746No Hit
GAACGCTGGCTGTGTGCCTAATACATGCATGTCGAGCGAGGTTAGCAATA128440.11560607275711934No Hit
GCCTTGGGTCTGGAAGTCGATGAAGGACGTGATTACCTGCGATAAGCCTC127760.11499401942891282No Hit
GCCTCGGTTAGCTGGAAATAAGCTGTTATCCGGGGATTTCCGAATGGGGA127560.11481400374414623No Hit
GGGGATCCTACGTTCCAAATGCAGCGAGCTCGTATAACCCTTTAAGAGTT125770.11320286336548503No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAAA124450.1120147598460254No Hit
GATGAACGCTGGCTGTGTGCCTAATACATGCATGTCGAGCGAGGTTAGCA122210.10999858417663931No Hit
TGAACGCTGGCTGTGTGCCTAATACATGCATGTCGAGCGAGGTTAGCAAT119590.10764037870619667No Hit
GTCGATGAAGGACGTGATTACCTGCGATAAGCCTCGGTTAGCTGGAAATA119510.10756837243229003No Hit
GTGAAACCCTGTCTGAATTTGCCGGGACCACCCGGTAAGGCTAAATACTA119460.10752336851109837No Hit
GTACTGGATGCATCTGCAGGATATCGCGGCCGCCATCTGCCCTACGTTTG115990.10440009638039763No Hit
AGTATGGCCCGGGGGATCCTTATCTGTCAAAACCGCTAATGTCCGTTCTA115160.10365303128861618No Hit
GTTGAAACTTAGGTAACACTAAGTGGAGGACCGAACCGCAGTACGCTAAA114600.10314898737126967No Hit
GTTTAAAGAGTGCGTAATAGCTCACTAGTCGAGAGACTTTGTGCCGATAA114050.10265394423816147No Hit
GTCGGGTCCTAAGACGAGGCCGAAAGGCGTAGCCGATGGACAACAGGTTA111860.10068277248996706No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)