FastQCFastQC Report
Mon 5 Feb 2024
HNCJWDRX3_n02_Nov_G3_DIP_PC2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCJWDRX3_n02_Nov_G3_DIP_PC2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8255122
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2813263.407896333936676No Hit
GGGGGATCCTACGTTCCAAATGCAGCGAGCTCGTATAACCCTTTAAGAGT501840.6079134869236336No Hit
AGTATGGCCCGGGGGATCCTACGTTCCAAATGCAGCGAGCTCGTATAACC454710.5508216595708701No Hit
GTACTGGATGCATCTGCAGGATATCGCGGCCGCTCGACGTAGAACTCAAT413620.501046501796097No Hit
GGGCCATACTAGTACTGGATGCATCTGCAGGATATCGCGGCCGCTCGACG367430.4450933614306366No Hit
GGGGGATCCTTATCTGTCAAAACCGCTAATGTCCGTTCTAAGACCGTCTG329170.39874637830912735No Hit
AGTATGGCCCGGGGGATCCTTATCTGTCAAAACCGCTAATGTCCGTTCTA276170.3345438141313962No Hit
GTACTGGATGCATCTGCAGGATATCGCGGCCGCCATCTGCCCTACGTTTG267810.3244167681592107No Hit
GGGCCATACTAGTACTGGATGCATCTGCAGGATATCGCGGCCGCCATCTG222650.2697113380032421No Hit
GTTAAATCCCGGGGCTCAACCCCGGCTCGCTTTGGATACTAGCAAACTAG188350.22816137665803124No Hit
CTTGGGTCTGGAAGTCGATGAAGGACGTGATTACCTGCGATAAGCCTCGG162000.19624179993948002No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGG154200.18679312068313467No Hit
GTTTGGTCAAGTCCTGCAACGAGCGCAACCCCTATCTTTAGTTACTAACA152320.18451574670852836No Hit
GTTTTTGGTGGATGCCTTGGGTCTGGAAGTCGATGAAGGACGTGATTACC145510.17626632289625763No Hit
GGACAGTGTGTGGTGGGTAGTTTGACTGGGGCGGTCGCCTCCTAAAGGGT142370.1724626238110109No Hit
GGCCATACTAGTACTGGATGCATCTGCAGGATATCGCGGCCGCTCGACGT141910.17190539400871363No Hit
GGGGGATCCTAGAGACCATTCGCGATTCCATGAGACTCCAAGGGTTCTGC137930.16708414484970666No Hit
GGCCATACTAGTACTGGATGCATCTGCAGGATATCGCGGCCGCCATCTGC132190.16013088601234482No Hit
CTGCAGGATATCGCGGCCGCCATCTGCCCTACGTTTGAGGGTTATAAGCT126770.15356526529832024No Hit
CCTGGCTCAGGATGAACGCTGGCTGTGTGCCTAATACATGCATGTCGAGC124260.15052472876839373No Hit
CTGCAGGATATCGCGGCCGCTCGACGTAGAACTCAATCTAAAACTTCGAT121480.14715712257190144No Hit
GTTTAGCCGGGTCGAGAGACTGAACGGCCACATTGGGACTGAGATACGGC120810.14634550525116408No Hit
GTTTCTTAAACAGCTAGGATGTTGGCTTAGAAGCAGCCACCGTTTAAAGA120220.14563079746126104No Hit
GGTTCGTCCACCCAGGGTTAGTCGGGTCCTAAGACGAGGCCGAAAGGCGT116510.14113661796881985No Hit
AGGTGATCTACCCATGAGCAGGTTGAAACTTAGGTAACACTAAGTGGAGG113480.13746616948847032No Hit
GGGAGACGTTGATGCTTGAACGCTAGTTTAAGAGTAGTCGCCGTTGAAAT107030.12965283856495396No Hit
GTGAAACCCTGTCTGAATTTGCCGGGACCACCCGGTAAGGCTAAATACTA106920.1295195879600568No Hit
GAAAACTATTGTCAAGGAACTCTGCAAATTCATCCCGTAAGTTCGCAAGA106910.12950747426870252No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAA103300.12513443168980423No Hit
AGTATGGCCCGGGGGATCCTAGAGACCATTCGCGATTCCATGAGACTCCA102670.12437126913448403No Hit
GCCTTGGGTCTGGAAGTCGATGAAGGACGTGATTACCTGCGATAAGCCTC102490.12415322269010683No Hit
GGAACATTAGTTAGTTGGTGAGGTAATGGCCCACCAAGACTATGATGTTT101910.12345062859155807No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGA98990.11991343071610572No Hit
GATGAACGCTGGCTGTGTGCCTAATACATGCATGTCGAGCGAGGTTAGCA98660.11951367890141419No Hit
GTACTGGATGCATCTGCAGGATATCGCGGCCGCGTCTTCAGAGGGGGATA98200.11895644909911689No Hit
AGTCGATGAAGGACGTGATTACCTGCGATAAGCCTCGGTTAGCTGGAAAT95610.11581900303835606No Hit
GAATCACTGACGCAGCTAACGCATTAAATGATCCGCCTGAGTAGTATGCT95560.11575843458158461No Hit
GTGAAATTCCCGTAAGCGAAATGTATAAATCTCCTAGCAGTATCCTGAGT94270.11419576839688135No Hit
GAACGCTGGCTGTGTGCCTAATACATGCATGTCGAGCGAGGTTAGCAATA93880.1137233344340641No Hit
GGGGATCCTACGTTCCAAATGCAGCGAGCTCGTATAACCCTTTAAGAGTT93850.11368699336000122No Hit
TGAACGGCCACATTGGGACTGAGATACGGCCCAAACTCCTACGGGAGGCA92410.11194262180498361No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT91140.11040418300298893No Hit
GTTGAAACTTAGGTAACACTAAGTGGAGGACCGAACCGCAGTACGCTAAA89450.1083569691641141No Hit
GTAGAATAAAGCGAAGCCGTAGAGAAATCGAGTCTGAATAGGGCGATTTA89320.10819949117650836No Hit
CCTTGGGTCTGGAAGTCGATGAAGGACGTGATTACCTGCGATAAGCCTCG88090.10670950713993083No Hit
GTTTAAAGAGTGCGTAATAGCTCACTAGTCGAGAGACTTTGTGCCGATAA88010.1066125976090965No Hit
CGATAGTGAACTAGTACCGTGAGGGAAAGGTGAAAAGAACCCCGGGAGGG86770.10511049988116469No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGG86430.10469863437511887No Hit
GTCGGGTCCTAAGACGAGGCCGAAAGGCGTAGCCGATGGACAACAGGTTA85010.10297849020280984No Hit
GGGAAGGATAATTTTACCACTAATTGGATTGTGGGGTAAGTAACAACTGG84860.1027967848324955No Hit
GTGAAAAGAACCCCGGGAGGGGAGTGAAATAGATTCTGAAACCAATTACT84520.10238491932644969No Hit
CTTGTGGGTAGGGGTGAAATTCCAATCGAACTTGGAGATAGCTGGTTCTC84520.10238491932644969No Hit
TGAACGCTGGCTGTGTGCCTAATACATGCATGTCGAGCGAGGTTAGCAAT83600.1012704597218551No Hit
GTCGATGAAGGACGTGATTACCTGCGATAAGCCTCGGTTAGCTGGAAATA82980.10051941085788921No Hit
GGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGATCATTAGTCGGT82860.10037404656163774No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)