FastQCFastQC Report
Mon 5 Feb 2024
HNCJWDRX3_n01_Dec_tz_3.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHNCJWDRX3_n01_Dec_tz_3.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences108853820
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGGAAACACCATCACCAGCATCGAAAACGATACCTGTTGTACGGCCAG1428430.13122460929712892No Hit
GTGGGAATGTAGCGAGGGAAGCAAGGATGGAGCCACCGACCCAAACGGCG1198330.1100861687720284No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)