FastQCFastQC Report
Thu 4 Mar 2021
HN7VJAFX2_n02_10705_flag.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHN7VJAFX2_n02_10705_flag.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2419205
Sequences flagged as poor quality0
Sequence length76
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG818273.3823921494871247No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGG37890.15662170010395976No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGG32530.1344656612399528No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGG25300.10457981030958516No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)