FastQCFastQC Report
Thu 4 Mar 2021
HN7VJAFX2_n02_10704_flag.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHN7VJAFX2_n02_10704_flag.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3221283
Sequences flagged as poor quality0
Sequence length76
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1747645.425291723825569No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGG35860.11132210364628006No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)