Sample basic_statistics Total Sequences Sequence length per_base_n_content kmer_content Encoding File type per_base_sequence_quality Filename per_base_sequence_content per_sequence_quality_scores sequence_length_distribution total_deduplicated_percentage avg_sequence_length per_sequence_gc_content overrepresented_sequences per_tile_sequence_quality adapter_content %GC sequence_duplication_levels Sequences flagged as poor quality HN2LKAFXX_n01_ah5187i3h-0817 pass 10941360.0 50.0 pass fail Sanger / Illumina 1.9 Conventional base calls pass HN2LKAFXX_n01_ah5187i3h-0817.fastq.gz fail pass pass 68.76831707601373 50.0 pass fail pass pass 39.0 warn 0.0 HN2LKAFXX_n01_ah5187top2-0817 pass 10265532.0 50.0 pass fail Sanger / Illumina 1.9 Conventional base calls pass HN2LKAFXX_n01_ah5187top2-0817.fastq.gz warn pass pass 59.79332631182077 50.0 pass warn pass pass 41.0 warn 0.0 HN2LKAFXX_n01_ah7606hop1-0817 pass 12848535.0 50.0 pass fail Sanger / Illumina 1.9 Conventional base calls pass HN2LKAFXX_n01_ah7606hop1-0817.fastq.gz fail pass pass 35.38472182812679 50.0 pass pass pass pass 37.0 fail 0.0 HN2LKAFXX_n01_ah7606i3h34c-0817 pass 11404373.0 50.0 pass fail Sanger / Illumina 1.9 Conventional base calls pass HN2LKAFXX_n01_ah7606i3h34c-0817.fastq.gz fail pass pass 65.96171895022515 50.0 pass pass pass pass 40.0 warn 0.0 HN2LKAFXX_n01_ah7606red1-0817 pass 9370947.0 50.0 pass fail Sanger / Illumina 1.9 Conventional base calls pass HN2LKAFXX_n01_ah7606red1-0817.fastq.gz fail pass pass 61.657660138417725 50.0 pass pass pass pass 37.0 warn 0.0 HN2LKAFXX_n01_ah7606top2-0817 pass 8182732.0 50.0 pass fail Sanger / Illumina 1.9 Conventional base calls pass HN2LKAFXX_n01_ah7606top2-0817.fastq.gz fail pass pass 68.51391233832834 50.0 pass warn pass pass 38.0 warn 0.0 HN2LKAFXX_n01_ah7669ha-0817 pass 12264848.0 50.0 pass fail Sanger / Illumina 1.9 Conventional base calls pass HN2LKAFXX_n01_ah7669ha-0817.fastq.gz warn pass pass 66.79283521139804 50.0 pass warn pass pass 39.0 warn 0.0 HN2LKAFXX_n01_ah7669i3h-0817 pass 11405322.0 50.0 pass fail Sanger / Illumina 1.9 Conventional base calls pass HN2LKAFXX_n01_ah7669i3h-0817.fastq.gz fail pass pass 67.07690170985809 50.0 pass warn pass pass 40.0 warn 0.0 HN2LKAFXX_n01_ah77970htop2-0817 pass 8250414.0 50.0 pass fail Sanger / Illumina 1.9 Conventional base calls pass HN2LKAFXX_n01_ah77970htop2-0817.fastq.gz fail pass pass 66.26070848597607 50.0 pass pass pass pass 40.0 warn 0.0 HN2LKAFXX_n01_ah77973htop2-0817 pass 10231830.0 50.0 pass fail Sanger / Illumina 1.9 Conventional base calls pass HN2LKAFXX_n01_ah77973htop2-0817.fastq.gz fail pass pass 64.84529655354282 50.0 pass warn pass pass 40.0 warn 0.0 HN2LKAFXX_n01_ah7797hop1-0817 pass 10415631.0 50.0 pass fail Sanger / Illumina 1.9 Conventional base calls pass HN2LKAFXX_n01_ah7797hop1-0817.fastq.gz fail pass pass 66.41118009553861 50.0 pass warn pass pass 38.0 warn 0.0 HN2LKAFXX_n01_ah7797i0h-0817 pass 10888295.0 50.0 pass fail Sanger / Illumina 1.9 Conventional base calls pass HN2LKAFXX_n01_ah7797i0h-0817.fastq.gz fail pass pass 68.38535586130176 50.0 pass warn pass pass 40.0 warn 0.0 HN2LKAFXX_n01_ah7797i3h-0817 pass 11447823.0 50.0 pass fail Sanger / Illumina 1.9 Conventional base calls pass HN2LKAFXX_n01_ah7797i3h-0817.fastq.gz fail pass pass 67.44252634774767 50.0 pass warn pass pass 39.0 warn 0.0 HN2LKAFXX_n01_ah7797i3h34c-0817 pass 12068295.0 50.0 pass fail Sanger / Illumina 1.9 Conventional base calls pass HN2LKAFXX_n01_ah7797i3h34c-0817.fastq.gz fail pass pass 66.19707243835647 50.0 pass pass pass pass 40.0 warn 0.0 HN2LKAFXX_n01_ah7797red1-0817 pass 9995944.0 50.0 pass fail Sanger / Illumina 1.9 Conventional base calls pass HN2LKAFXX_n01_ah7797red1-0817.fastq.gz fail pass pass 63.132954237974815 50.0 pass pass pass pass 38.0 warn 0.0 HN2LKAFXX_n01_ah7797top2-0817 pass 10466237.0 50.0 pass fail Sanger / Illumina 1.9 Conventional base calls pass HN2LKAFXX_n01_ah7797top2-0817.fastq.gz fail pass pass 62.96701944876902 50.0 pass pass pass pass 40.0 warn 0.0