HN22FAFXY_n01_735.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	HN22FAFXY_n01_735.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7672088
Sequences flagged as poor quality	0
Sequence length	76
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCCGTCCATCTCGTATG	34776	0.45327947228968174	TruSeq Adapter, Index 16 (97% over 49bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTGCTTG	7715	40.14732	58
GCCGTCT	7805	39.370747	50
TGCCGTC	8200	39.309277	49
TATGCCG	8605	38.02857	47
ATGCCGT	8715	37.227303	48
CATCTCG	8000	36.923405	40
CCGTCTT	8595	36.199947	51
TGCTTGA	8550	36.14463	59
GTATGCC	9265	35.735096	46
ACCCGTC	9900	35.388046	33
TCACCCG	9930	35.35163	31
CTCGTAT	8795	34.819416	43
CCGTCCA	9970	34.647675	35
CACCCGT	10150	34.516422	32
GTCCATC	9155	33.908962	37
GTCACCC	10450	33.72647	30
CCCGTCC	10385	33.701218	34
GCTTGAA	9690	33.445404	60
CGTCCAT	9810	33.286022	36
CGTATGC	10025	32.816532	45