FastQCFastQC Report
Wed 23 Mar 2022
HMYYNDRXY_l02_n01_RS194.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMYYNDRXY_l02_n01_RS194.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10219046
Sequences flagged as poor quality0
Sequence length101
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGATGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC379620.37148281747630846No Hit
CTAATGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATC215720.21109602598911875No Hit
AATGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATCGT125370.12268268486118959No Hit
TGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATCGTTA124480.12181176207642083No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)