FastQCFastQC Report
Wed 23 Mar 2022
HMYYNDRXY_l02_n01_RS168.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameHMYYNDRXY_l02_n01_RS168.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9154062
Sequences flagged as poor quality0
Sequence length101
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGATGATATATGTTATGTGAAAATGTTGTGATCGTTATCCTATACGACAC419820.45861607666629306No Hit
CTAATGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATC209310.2286525916035963No Hit
TGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATCGTTA122410.13372205694040526No Hit
AATGTATATATATATTGATGATATATGTTATGTGAAAATGTTGTGATCGT118000.1289045234782111No Hit
TTATCCTATACGACACACCCAGTCTTGTAAAGCTGGGACCCACATCACAC110280.12047110889133152No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)